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IMGVR_UViG_3300002219_000139-3300002219-SCADCLC_1004105930

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300002219_000139-3300002219-SCADCLC_1004105930 ↗
Kingdom:: archaea

Quality

91.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-77

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5ovnA03	3.30.70.270	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain	0.68	45.0	4.22e-01	85.1%	54.3%
3swhA01	1.10.357.50	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 ›	0.63	43.0	3.28e-01	70.3%	69.1%
2k5eA00	1.10.3910.10	Mainly Alpha › Orthogonal Bundle › SP0561-like › SP0561-like	0.62	41.0	4.12e-01	91.9%	68.5%
3rrkA03	3.30.70.2750	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.62	32.0	3.25e-01	83.8%	48.6%
7zhgO01	1.10.8.50	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.62	44.0	4.63e-01	97.3%	84.8%
1mu5A02	1.10.8.50	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.59	43.0	4.23e-01	98.6%	73.1%
8d8lM01	1.10.8.50	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.58	42.0	4.14e-01	95.9%	70.4%
2k53A00	1.10.3910.10	Mainly Alpha › Orthogonal Bundle › SP0561-like › SP0561-like	0.56	37.0	3.82e-01	91.9%	71.4%
7r5yA01	3.40.50.1240	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like	0.52	42.0	2.68e-01	90.5%	56.7%
1wteB01	1.10.3250.10	Mainly Alpha › Orthogonal Bundle › type ii restriction endonuclease, domain 1 › type ii restriction endonuclease, domain 1	0.51	44.0	3.56e-01	97.3%	72.1%
2xrnA02	3.30.450.40	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain	0.51	40.0	3.09e-01	86.5%	59.3%

ECOD (18)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5044088	102.2.1.0 ↗	alpha arrays › HhH/H2TH › H2TH › H2TH	0.67	45.0	4.76e-01	95.9%	78.5%
3506053	4967.1.1.28 ↗	alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Peptidase_A17	0.67	49.0	4.79e-01	89.2%	72.5%
3503962	4967.1.1.29 ↗	alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › DUF7047	0.65	47.0	4.60e-01	91.9%	71.2%
3311219	102.2.1.0 ↗	alpha arrays › HhH/H2TH › H2TH › H2TH	0.63	43.0	4.45e-01	93.2%	75.7%
3699849	102.2.1.0 ↗	alpha arrays › HhH/H2TH › H2TH › H2TH	0.62	44.0	4.24e-01	98.6%	65.9%
3451103	102.2.1.6 ↗	alpha arrays › HhH/H2TH › H2TH › H2TH › HI0933_like_1st	0.62	44.0	4.47e-01	98.6%	76.0%
4660492	102.2.1.0 ↗	alpha arrays › HhH/H2TH › H2TH › H2TH	0.59	43.0	4.40e-01	98.6%	80.0%
3918837	108.1.1.0 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand	0.58	42.0	4.17e-01	100.0%	73.8%
3955671	633.22.1.1 ↗	alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) › VKOR	0.57	39.0	2.96e-01	71.6%	44.2%
4605981	102.2.1.0 ↗	alpha arrays › HhH/H2TH › H2TH › H2TH	0.56	40.0	4.10e-01	97.3%	80.0%
3918298	108.1.1.27 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6	0.55	42.0	4.24e-01	98.6%	84.0%
3547911	108.1.1.29 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7	0.55	42.0	4.10e-01	98.6%	74.1%
2722040	110.1.1.3 ↗	alpha arrays › DEATH domain › DEATH domain › DEATH domain › DED	0.55	33.0	3.11e-01	70.3%	47.4%
4366692	102.2.1.0 ↗	alpha arrays › HhH/H2TH › H2TH › H2TH	0.54	41.0	4.06e-01	97.3%	77.5%
3289194	227.1.1.16 ↗	a+b two layers › DNA clamp › DNA clamp › DNA clamp › PF26572	0.53	41.0	3.70e-01	90.5%	85.2%
5049499	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.51	43.0	3.47e-01	100.0%	47.6%
3251853	108.1.1.0 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand	0.51	44.0	4.31e-01	100.0%	96.2%
2035869	4002.1.1.3 ↗	alpha bundles › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › Fe-ADH_2	0.51	40.0	2.64e-01	86.5%	39.9%

D2 medium residues 78-131

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1puoB00	1.20.920.50	Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A ›	0.63	42.0	3.17e-01	100.0%	26.8%
3ihjA03	3.40.640.10	Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain)	0.55	45.0	3.05e-01	100.0%	82.5%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3573856	109.4.1.576 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exportin-5	0.54	45.0	2.96e-01	100.0%	33.5%
3979597	5058.1.1.0 ↗	alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region	0.51	38.0	3.68e-01	96.3%	70.8%