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IMGVR_UViG_3300002376_000021-3300002376-JGI24505J29691_100258611
Arc-VirIMGVR_UViG_3300002376_000021-3300002376-JGI24505J29691_100258611
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-79
Domain cluster:
representative
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.83 | 76.0 | 5.71e-01 | 98.7% | 48.0% |
| 3cddA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.83 | 75.0 | 5.56e-01 | 98.7% | 49.5% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.80 | 72.0 | 5.51e-01 | 100.0% | 72.7% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.76 | 66.0 | 5.00e-01 | 94.8% | 48.9% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.74 | 67.0 | 5.80e-01 | 100.0% | 69.2% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.74 | 67.0 | 6.01e-01 | 100.0% | 88.6% |
| 3f6gA01 | 3.30.160.740 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.73 | 36.0 | 4.08e-01 | 89.6% | 62.1% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.72 | 64.0 | 6.40e-01 | 97.4% | 100.0% |
| 1shyA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.68 | 59.0 | 5.42e-01 | 98.7% | 77.5% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 54.0 | 5.24e-01 | 89.6% | 79.1% |
| 1omsA00 | 3.30.70.1050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain | 0.65 | 50.0 | 4.45e-01 | 84.4% | 95.6% |
| 2aneH00 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.63 | 54.0 | 4.85e-01 | 96.1% | 78.9% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 39.0 | 4.21e-01 | 100.0% | 72.7% |
| 2wcrB00 | 3.10.129.140 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Helicobacter TNF-alpha-Inducing protein | 0.63 | 48.0 | 3.90e-01 | 81.8% | 67.1% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 40.0 | 4.36e-01 | 100.0% | 79.4% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.62 | 52.0 | 4.49e-01 | 94.8% | 67.2% |
| 1ep3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 51.0 | 4.72e-01 | 93.5% | 70.7% |
| 3fawA01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 45.0 | 4.25e-01 | 89.6% | 64.1% |
| 2qrdB01 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.62 | 30.0 | 3.97e-01 | 87.0% | 94.6% |
| 2cwaA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 36.0 | 3.21e-01 | 93.5% | 42.2% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 39.0 | 4.25e-01 | 100.0% | 80.6% |
| 1x31A02 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.60 | 43.0 | 2.72e-01 | 74.0% | 23.0% |
| 4ic6C01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 52.0 | 4.71e-01 | 100.0% | 73.6% |
| 2cdqA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 45.0 | 4.44e-01 | 89.6% | 73.8% |
| 6c98A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 46.0 | 4.42e-01 | 88.3% | 70.3% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.60 | 35.0 | 4.22e-01 | 100.0% | 93.8% |
| 2q7aA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 53.0 | 4.26e-01 | 100.0% | 65.1% |
| 1zysA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 49.0 | 4.56e-01 | 100.0% | 74.7% |
| 1zyoA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 47.0 | 4.67e-01 | 100.0% | 86.7% |
| 6n3oA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 49.0 | 4.69e-01 | 100.0% | 81.1% |
| 4feiA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 46.0 | 4.20e-01 | 88.3% | 86.3% |
| 5qinA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 48.0 | 4.71e-01 | 100.0% | 84.7% |
| 8fd9A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 44.0 | 4.48e-01 | 97.4% | 84.4% |
| 1ja1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 47.0 | 4.10e-01 | 93.5% | 59.8% |
| 3jr1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 45.0 | 4.15e-01 | 98.7% | 67.7% |
| 3mdyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 46.0 | 4.12e-01 | 100.0% | 64.5% |
| 1xzpB00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.56 | 44.0 | 3.80e-01 | 89.6% | 65.6% |
| 2bn4B03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 48.0 | 3.87e-01 | 100.0% | 58.2% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.55 | 37.0 | 4.15e-01 | 100.0% | 94.6% |
| 2iiiA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.54 | 43.0 | 3.75e-01 | 87.0% | 70.0% |
| 4rsvA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 4.18e-01 | 89.6% | 76.7% |
| 3tfzB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 38.0 | 2.98e-01 | 74.0% | 66.7% |
| 1ut9A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 3.89e-01 | 100.0% | 68.4% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 36.0 | 3.00e-01 | 100.0% | 38.9% |
| 5ksdA04 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.52 | 41.0 | 3.35e-01 | 87.0% | 59.5% |
| 2fm8B00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 40.0 | 3.47e-01 | 87.0% | 52.8% |
| 1y6zA01 | 3.30.230.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.51 | 45.0 | 3.61e-01 | 100.0% | 51.9% |
| 4gioA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 45.0 | 4.21e-01 | 100.0% | 85.4% |
| 4i93A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 42.0 | 3.99e-01 | 98.7% | 75.8% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4988103 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.88 | 81.0 | 7.50e-01 | 98.7% | 95.8% |
| 3604610 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.86 | 70.0 | 7.56e-01 | 84.4% | 100.0% |
| 2475124 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.86 | 78.0 | 7.25e-01 | 97.4% | 98.9% |
| 184471 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.83 | 76.0 | 7.31e-01 | 98.7% | 97.7% |
| 4810019 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.83 | 75.0 | 6.60e-01 | 98.7% | 89.1% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.83 | 70.0 | 6.74e-01 | 90.9% | 100.0% |
| 3972305 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.83 | 75.0 | 7.08e-01 | 97.4% | 97.8% |
| 3966429 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.83 | 75.0 | 7.08e-01 | 97.4% | 97.8% |
| 4889788 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.83 | 74.0 | 6.83e-01 | 97.4% | 96.9% |
| 3982237 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.82 | 67.0 | 6.53e-01 | 87.0% | 87.1% |
| 1178487 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.82 | 74.0 | 6.88e-01 | 98.7% | 94.8% |
| 3968713 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.81 | 74.0 | 7.03e-01 | 98.7% | 95.6% |
| 3948350 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.81 | 75.0 | 6.79e-01 | 100.0% | 99.0% |
| 3588729 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.80 | 70.0 | 6.52e-01 | 94.8% | 100.0% |
| 169881 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.80 | 72.0 | 5.29e-01 | 100.0% | 63.1% |
| 4031285 | 1.1.13.64 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal | 0.80 | 72.0 | 6.81e-01 | 100.0% | 97.8% |
| 184486 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.79 | 72.0 | 7.11e-01 | 98.7% | 95.1% |
| 4033712 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.79 | 69.0 | 6.68e-01 | 94.8% | 100.0% |
| 4954563 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 71.0 | 6.85e-01 | 100.0% | 100.0% |
| 4888819 | 1.1.13.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_1 | 0.77 | 70.0 | 6.17e-01 | 100.0% | 91.0% |
| 4883825 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.77 | 71.0 | 6.65e-01 | 100.0% | 96.7% |
| 5076884 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 40.0 | 3.16e-01 | 93.5% | 27.6% |
| 160389 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.75 | 68.0 | 5.77e-01 | 100.0% | 65.9% |
| 3972102 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 64.0 | 5.88e-01 | 94.8% | 81.0% |
| 3945543 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 64.0 | 6.24e-01 | 94.8% | 91.8% |
| 3974181 | 1.1.5.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PF29489 | 0.73 | 66.0 | 6.31e-01 | 100.0% | 86.7% |
| 3389361 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 61.0 | 5.67e-01 | 93.5% | 73.7% |
| 3944005 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.73 | 58.0 | 4.86e-01 | 92.2% | 50.4% |
| 4379249 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.73 | 65.0 | 5.53e-01 | 100.0% | 68.0% |
| 3404225 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.72 | 60.0 | 4.36e-01 | 100.0% | 33.3% |
| 5064178 | 1.1.13.73 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PUA | 0.72 | 53.0 | 5.88e-01 | 79.2% | 100.0% |
| 2137681 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.71 | 63.0 | 5.65e-01 | 100.0% | 71.6% |
| 4401809 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.70 | 56.0 | 5.35e-01 | 93.5% | 73.3% |
| 3868227 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 55.0 | 5.14e-01 | 88.3% | 69.5% |
| 3967786 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.69 | 59.0 | 5.51e-01 | 94.8% | 76.8% |
| 3337303 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 35.0 | 3.59e-01 | 90.9% | 52.0% |
| 1501 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 54.0 | 5.07e-01 | 89.6% | 72.3% |
| 3802051 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 53.0 | 4.92e-01 | 93.5% | 70.5% |
| 3221229 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 39.0 | 4.78e-01 | 100.0% | 100.0% |
| 4646632 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.65 | 41.0 | 4.41e-01 | 100.0% | 75.4% |
| 3402496 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.64 | 55.0 | 3.90e-01 | 93.5% | 46.7% |
| 4340669 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.64 | 51.0 | 4.47e-01 | 88.3% | 96.7% |
| 4023972 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.63 | 51.0 | 4.64e-01 | 92.2% | 65.7% |
| 3496428 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.62 | 51.0 | 4.22e-01 | 88.3% | 100.0% |
| 4527829 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 50.0 | 4.67e-01 | 89.6% | 70.5% |
| 4943219 | 205.1.1.123 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer2_BFD | 0.61 | 55.0 | 4.36e-01 | 100.0% | 77.4% |
| 3253616 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.61 | 53.0 | 3.98e-01 | 94.8% | 65.9% |
| 3268937 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 50.0 | 4.53e-01 | 90.9% | 66.7% |
| 5021756 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.60 | 52.0 | 3.53e-01 | 100.0% | 27.2% |
| 3896440 | 11.1.1.260 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG_2 | 0.60 | 49.0 | 4.39e-01 | 89.6% | 65.5% |
| 3950208 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.60 | 39.0 | 4.18e-01 | 100.0% | 76.9% |
| 4958334 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.60 | 54.0 | 4.25e-01 | 100.0% | 73.8% |
| 4629425 | 11.1.1.1369 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1410 | 0.60 | 49.0 | 4.60e-01 | 89.6% | 72.6% |
| 3214926 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 49.0 | 4.57e-01 | 92.2% | 77.0% |
| 4028885 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.59 | 38.0 | 4.11e-01 | 100.0% | 76.9% |
| 4330292 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.59 | 52.0 | 4.44e-01 | 100.0% | 91.5% |
| 3239793 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 48.0 | 4.24e-01 | 92.2% | 64.2% |
| 3689674 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.58 | 48.0 | 4.08e-01 | 90.9% | 70.3% |
| 3321290 | 11.1.1.902 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_GEX2_N | 0.58 | 48.0 | 4.26e-01 | 92.2% | 71.3% |
| 4018860 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 48.0 | 4.20e-01 | 96.1% | 59.2% |
| 154597 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.57 | 46.0 | 4.20e-01 | 88.3% | 86.3% |
| 3904461 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.56 | 51.0 | 3.50e-01 | 100.0% | 51.2% |
| 3891879 | 11.1.1.117 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EpoR_lig-bind | 0.56 | 43.0 | 3.93e-01 | 85.7% | 61.0% |
| 3887624 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.56 | 49.0 | 3.87e-01 | 100.0% | 46.9% |
| 3736075 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.56 | 48.0 | 3.77e-01 | 100.0% | 48.3% |
| 3636081 | 4972.1.1.1 ↗ | beta barrels › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › DUF917_C | 0.56 | 39.0 | 3.20e-01 | 74.0% | 90.2% |
| 3741378 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.55 | 46.0 | 3.60e-01 | 94.8% | 43.9% |
| 3169783 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.55 | 46.0 | 3.52e-01 | 93.5% | 53.2% |
| 3254110 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 49.0 | 4.00e-01 | 100.0% | 55.2% |
| 3258651 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.54 | 48.0 | 2.98e-01 | 100.0% | 17.1% |
| 4093842 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.53 | 45.0 | 3.21e-01 | 96.1% | 32.7% |
| 4618633 | 4.26.1.1 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 | 0.53 | 35.0 | 3.92e-01 | 100.0% | 89.8% |
| 4040055 | 4.26.1.1 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 | 0.53 | 34.0 | 3.81e-01 | 98.7% | 87.9% |
| 2066798 | 300.1.1.2 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › DNase_II | 0.53 | 42.0 | 3.37e-01 | 87.0% | 77.1% |
| 5036070 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 46.0 | 4.22e-01 | 100.0% | 75.2% |
| 3474447 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.53 | 48.0 | 3.34e-01 | 100.0% | 45.8% |
| 4114985 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.52 | 44.0 | 4.12e-01 | 100.0% | 76.8% |
| 220098 | 11.1.1.93 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1425 | 0.51 | 45.0 | 4.21e-01 | 100.0% | 85.4% |
| 4518168 | 2003.1.5.71 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_33 | 0.51 | 45.0 | 2.96e-01 | 100.0% | 47.9% |
| None | — | 0.51 | 39.0 | 3.12e-01 | 87.0% | 48.6% |
D2
high
residues 97-185
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d37A02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.79 | 61.0 | 6.31e-01 | 100.0% | 85.9% |
| 4m0nA02 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.75 | 56.0 | 5.95e-01 | 100.0% | 90.9% |
| 4e9jB01 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.74 | 57.0 | 4.86e-01 | 100.0% | 52.2% |
| 7pmpA01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.73 | 56.0 | 6.03e-01 | 100.0% | 97.3% |
| 1r85A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.50 | 42.0 | 2.86e-01 | 96.6% | 46.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4048982 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.76 | 56.0 | 5.84e-01 | 100.0% | 85.0% |
| 4200887 | 3070.1.1.17 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › YQBQ | 0.73 | 59.0 | 5.88e-01 | 100.0% | 85.6% |
| 8831 | 2002.1.1.18 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_10 | 0.50 | 42.0 | 2.86e-01 | 96.6% | 46.1% |