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IMGVR_UViG_3300002481_000002-3300002481-JGI24020J35080_100032745

Arc-Vir

IMGVR_UViG_3300002481_000002-3300002481-JGI24020J35080_100032745

Quality

81.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 305-387
PDB
D2 medium residues 2-261
PDB
Domain cluster: representative
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3inpA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.72 58.0 6.27e-01 100.0% 98.6%
3dx5A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.72 51.0 5.01e-01 71.2% 87.9%
2ekcB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 62.0 6.32e-01 100.0% 93.8%
1g6cB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 54.0 5.76e-01 100.0% 90.3%
2p10C01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 51.0 5.25e-01 73.5% 91.8%
4qhrA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.70 51.0 5.62e-01 76.9% 91.8%
1mzhA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 56.0 6.05e-01 100.0% 96.4%
1hg3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 55.0 5.90e-01 99.2% 97.3%
1p0kA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.67 59.0 5.57e-01 100.0% 77.8%
2wnwA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.67 63.0 5.76e-01 100.0% 98.8%
1vypX00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.67 61.0 5.42e-01 96.2% 95.6%
3thaB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.67 59.0 6.01e-01 97.7% 95.2%
7f8eA01 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.67 50.0 5.43e-01 95.0% 90.5%
3sqsA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.66 55.0 5.61e-01 99.2% 89.1%
4u3aB00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.66 62.0 5.92e-01 98.8% 95.6%
6r62A00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.66 57.0 5.85e-01 90.8% 93.7%
3vdhA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.66 61.0 5.58e-01 98.8% 96.7%
2oqhA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.65 53.0 5.45e-01 99.2% 89.0%
5swuA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.65 57.0 5.80e-01 99.2% 94.8%
5c54G00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.65 60.0 5.64e-01 97.3% 99.0%
5ay7B00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 61.0 5.61e-01 100.0% 96.3%
4xkyA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 54.0 5.12e-01 98.8% 75.8%
1jqxA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 58.0 5.75e-01 100.0% 92.1%
5z1aA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 60.0 5.61e-01 98.8% 93.5%
3a9iA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.63 51.0 5.08e-01 82.3% 97.7%
2i7gB00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.63 60.0 5.38e-01 100.0% 99.4%
3lerA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.63 58.0 5.51e-01 96.2% 98.0%
2nq5A01 3.20.20.210 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.63 51.0 4.39e-01 83.5% 79.3%
3ianA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 59.0 5.48e-01 100.0% 97.2%
6jebA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 60.0 5.28e-01 100.0% 92.8%
4e2oA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.62 58.0 5.20e-01 100.0% 97.8%
6ki3A01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.62 58.0 5.58e-01 100.0% 100.0%
1u1jA01 3.20.20.210 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.62 58.0 4.95e-01 100.0% 91.8%
3b4yA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.62 58.0 5.33e-01 100.0% 99.4%
3aamA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.61 58.0 5.74e-01 100.0% 100.0%
6d1pB01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 57.0 5.33e-01 98.8% 93.0%
3ktcA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.61 57.0 5.25e-01 100.0% 87.0%
1ad1A00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.61 56.0 5.63e-01 100.0% 96.6%
3k8kA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.60 56.0 5.05e-01 100.0% 95.5%
1fdyB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.60 53.0 5.10e-01 95.4% 82.5%
1t7lB01 3.20.20.210 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.60 56.0 4.90e-01 100.0% 92.6%
1ea9C02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.60 56.0 5.19e-01 100.0% 95.4%
3r79A00 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.60 47.0 5.01e-01 90.0% 93.0%
2x7vA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.60 56.0 5.42e-01 100.0% 99.3%
1fcqA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 55.0 5.18e-01 98.8% 99.0%
3fwzA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 31.0 4.10e-01 77.3% 90.7%
3epnB01 3.20.20.540 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Radical SAM ThiC family, central domain 0.59 55.0 5.22e-01 100.0% 92.2%
5ot1A02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.59 55.0 4.92e-01 100.0% 94.4%
3qyqA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 53.0 5.28e-01 98.5% 91.9%
7db5A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.58 55.0 4.99e-01 100.0% 94.7%
6lcjD01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 54.0 5.23e-01 100.0% 99.7%
4g9pA01 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.58 54.0 5.23e-01 99.6% 99.0%
3kzpA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.57 46.0 4.84e-01 93.8% 92.6%
1f6kC00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 50.0 4.91e-01 94.6% 98.6%
1fcdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 29.0 3.73e-01 70.8% 92.1%
5l3sB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 37.0 4.12e-01 71.2% 94.8%
1bwpA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.53 37.0 4.05e-01 70.4% 88.2%
1izjA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 47.0 4.06e-01 98.8% 88.9%
2j48A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 25.0 3.50e-01 93.1% 99.2%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995745 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.86 82.0 7.53e-01 100.0% 95.7%
4995886 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.82 79.0 7.03e-01 100.0% 83.4%
4997013 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.81 77.0 7.38e-01 100.0% 96.6%
3198155 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.74 52.0 5.99e-01 96.9% 95.8%
4385959 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.74 51.0 5.25e-01 92.7% 73.5%
5026936 2002.1.1.57 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D 0.73 52.0 4.73e-01 71.5% 81.2%
4941332 2002.1.1.37 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim 0.72 57.0 6.20e-01 100.0% 97.2%
5003727 2002.1.1.10 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS 0.71 58.0 5.69e-01 100.0% 79.6%
3375769 2002.1.1.234 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_2+Meth_synt_1 0.70 50.0 4.25e-01 71.5% 76.8%
4890585 2002.1.1.38 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TAL_FSA 0.70 54.0 5.79e-01 86.2% 91.1%
4664632 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.70 63.0 6.41e-01 100.0% 96.1%
4211024 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.70 61.0 6.27e-01 99.6% 94.1%
3782510 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.70 56.0 5.11e-01 83.1% 87.9%
None 0.70 62.0 6.45e-01 99.2% 100.0%
None 0.69 63.0 6.35e-01 100.0% 94.3%
None 0.69 63.0 6.26e-01 100.0% 91.9%
4101336 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.69 62.0 6.39e-01 100.0% 98.4%
None 0.69 62.0 6.39e-01 100.0% 98.4%
None 0.69 62.0 6.16e-01 100.0% 90.7%
3505834 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.69 56.0 4.33e-01 100.0% 40.0%
4189701 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.69 61.0 6.19e-01 100.0% 94.1%
4120812 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.69 61.0 6.26e-01 100.0% 98.0%
4016387 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.68 62.0 5.80e-01 98.8% 79.4%
3643243 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.68 63.0 6.13e-01 100.0% 89.6%
None 0.68 61.0 6.15e-01 99.6% 93.6%
4927923 2002.1.1.3 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TIM 0.67 55.0 5.93e-01 100.0% 99.1%
428368 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.67 59.0 6.01e-01 97.7% 95.2%
None 0.67 61.0 6.15e-01 100.0% 95.1%
4152729 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.66 61.0 5.96e-01 100.0% 91.0%
None 0.66 61.0 5.97e-01 100.0% 91.0%
5035994 2002.1.1.84 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MtrH 0.66 55.0 5.59e-01 98.5% 89.6%
4088626 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.65 61.0 6.15e-01 99.2% 98.8%
5075114 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.65 61.0 5.27e-01 99.2% 99.7%
3288748 2002.1.1.16 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase 0.64 61.0 5.48e-01 100.0% 97.4%
1519239 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.64 58.0 5.49e-01 94.2% 88.3%
3251564 2002.1.1.234 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_2+Meth_synt_1 0.64 50.0 4.08e-01 79.6% 94.5%
2756504 2002.1.1.4 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase 0.64 59.0 5.01e-01 100.0% 93.2%
4789618 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.64 34.0 4.45e-01 78.8% 92.3%
4275183 2003.1.1.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Slo-like_RCK 0.64 35.0 4.31e-01 86.2% 81.8%
3062997 2002.1.1.146 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.62 56.0 4.79e-01 93.5% 86.0%
4470571 2002.1.1.154 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_1 0.62 58.0 4.92e-01 100.0% 92.9%
2629957 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.61 57.0 5.48e-01 100.0% 98.7%
5077891 2002.1.1.112 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_114 0.61 57.0 5.38e-01 98.5% 90.5%
4862537 2002.1.1.33 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_20 0.61 53.0 5.09e-01 91.5% 100.0%
3607835 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.61 54.0 5.23e-01 94.2% 99.7%
3602450 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.61 57.0 5.41e-01 99.6% 92.7%
3584467 2007.5.1.0 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase 0.61 34.0 4.08e-01 75.4% 80.6%
3535667 2003.1.1.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Slo-like_RCK 0.60 33.0 4.15e-01 74.2% 84.2%
3701056 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.60 32.0 4.16e-01 75.8% 89.7%
3952556 2002.1.1.16 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase 0.60 55.0 5.51e-01 100.0% 95.8%
4342796 2002.1.1.122 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS 0.60 51.0 4.56e-01 93.8% 65.4%
4955394 2002.1.1.112 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_114 0.59 53.0 5.39e-01 99.2% 96.5%
3992990 2003.1.1.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Slo-like_RCK 0.59 35.0 4.16e-01 73.5% 85.3%
3599874 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.59 36.0 4.21e-01 77.3% 83.8%
2774267 2002.1.1.87 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Melibiase 0.59 55.0 5.21e-01 100.0% 95.7%
3710563 2003.1.1.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Slo-like_RCK 0.58 36.0 4.32e-01 77.3% 91.2%
3487682 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.58 34.0 4.15e-01 75.0% 87.9%
4228869 2002.1.1.122 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS 0.58 51.0 4.92e-01 91.2% 86.0%
3880654 2003.1.1.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Slo-like_RCK 0.55 42.0 3.63e-01 78.5% 93.7%
3244638 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.55 45.0 4.81e-01 93.5% 99.5%
None 0.54 40.0 3.49e-01 76.2% 79.3%
5014710 2007.1.2.42 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › PF29770 0.52 34.0 3.87e-01 98.1% 87.4%
5074203 7512.1.1.107 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › DUF354 0.51 33.0 3.83e-01 98.8% 90.8%
3395557 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.51 41.0 3.35e-01 83.5% 82.3%
3388009 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.51 36.0 3.85e-01 71.5% 87.6%
5021522 2003.6.1.4 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › ADP_PFK_GK 0.51 46.0 3.85e-01 98.8% 79.7%
3967796 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.50 46.0 4.52e-01 100.0% 95.1%
5004885 2003.6.1.4 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › ADP_PFK_GK 0.50 45.0 3.83e-01 98.8% 78.9%