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IMGVR_UViG_3300002481_000013-3300002481-JGI24020J35080_100116323
Arc-VirIMGVR_UViG_3300002481_000013-3300002481-JGI24020J35080_100116323
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-16_18-94
Domain cluster:
rep: IMGVR_UViG_3300014911_000041-3300014911-Ga0180301_1000169627__D2-83
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x49A02 | 3.40.5.40 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › FHIPEP family, domain 2 | 0.57 | 30.0 | 3.91e-01 | 78.3% | 95.8% |
| 7d4rB01 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.55 | 39.0 | 3.01e-01 | 75.0% | 86.3% |
| 7bkea01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 30.0 | 3.31e-01 | 87.0% | 70.3% |
| 6yiiA01 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.52 | 37.0 | 2.82e-01 | 75.0% | 75.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5029067 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.66 | 31.0 | 3.97e-01 | 76.1% | 80.0% |
| 4204477 | 1.1.5.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PF27476 | 0.59 | 41.0 | 4.15e-01 | 78.3% | 71.3% |
| 5016546 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 40.0 | 4.37e-01 | 94.6% | 96.0% |
| 4981990 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.52 | 28.0 | 3.36e-01 | 85.9% | 83.6% |
| 4951774 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 29.0 | 2.75e-01 | 73.9% | 43.5% |
| 3241792 | 5001.1.1.66 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg | 0.51 | 35.0 | 2.71e-01 | 70.7% | 88.3% |
| 4584978 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.50 | 37.0 | 2.66e-01 | 80.4% | 96.7% |