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IMGVR_UViG_3300002481_000019-3300002481-JGI24020J35080_10022768

Arc-Vir

IMGVR_UViG_3300002481_000019-3300002481-JGI24020J35080_10022768

Quality

90.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-62
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1etkA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.94 64.0 5.60e-01 70.4% 52.0%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 64.0 5.78e-01 81.5% 60.0%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 66.0 5.52e-01 83.3% 61.4%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 65.0 5.41e-01 83.3% 60.0%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 64.0 5.52e-01 83.3% 65.9%
1g2hA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 54.0 5.22e-01 72.2% 63.9%
1b9mB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 60.0 4.87e-01 83.3% 54.5%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 60.0 5.16e-01 85.2% 63.5%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 5.38e-01 90.7% 65.2%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 63.0 5.21e-01 98.1% 58.7%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.74 61.0 4.55e-01 90.7% 42.0%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 5.16e-01 90.7% 67.0%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 57.0 5.60e-01 83.3% 84.5%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 5.17e-01 83.3% 73.1%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 55.0 5.43e-01 83.3% 87.5%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 54.0 4.87e-01 83.3% 65.3%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 4.91e-01 90.7% 70.1%
3oioA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 60.0 4.84e-01 100.0% 70.5%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 53.0 4.94e-01 83.3% 70.0%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 54.0 5.32e-01 83.3% 82.8%
1a9xA04 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.69 54.0 3.95e-01 85.2% 42.0%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 53.0 5.05e-01 83.3% 76.2%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.24e-01 90.7% 72.2%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 4.86e-01 90.7% 65.0%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 3.87e-01 85.2% 41.4%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 54.0 3.68e-01 90.7% 25.2%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 4.58e-01 83.3% 76.6%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 50.0 3.88e-01 85.2% 43.4%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 50.0 3.84e-01 85.2% 42.3%
3ni7A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 56.0 3.93e-01 98.1% 85.1%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 4.26e-01 83.3% 72.6%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 48.0 4.37e-01 83.3% 59.2%
5fglA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 54.0 3.74e-01 100.0% 81.0%
4fx0A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 47.0 3.65e-01 77.8% 34.4%
2i2xB01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.62 52.0 4.31e-01 98.1% 52.0%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.62 52.0 3.99e-01 96.3% 42.1%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 49.0 4.88e-01 98.1% 87.5%
4dyqA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 50.0 4.21e-01 100.0% 58.3%
7y9hB01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.60 53.0 3.27e-01 98.1% 66.0%
5d0yA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.60 50.0 3.75e-01 100.0% 84.5%
2wglA00 1.10.4190.10 Mainly Alpha › Orthogonal Bundle › Urease accessory protein UreF › Urease accessory protein UreF 0.58 49.0 3.36e-01 100.0% 75.1%
3bhqA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 47.0 3.32e-01 100.0% 83.7%
3ppbA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 47.0 3.36e-01 100.0% 83.0%
2uyyA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.57 47.0 3.62e-01 92.6% 59.3%
8h6qD01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.56 45.0 2.95e-01 100.0% 29.6%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.53 44.0 3.90e-01 100.0% 63.2%
1ailA00 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.53 43.0 4.11e-01 100.0% 100.0%
5m9dA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 40.0 3.12e-01 100.0% 36.2%
5svlA01 1.10.287.940 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel 0.51 37.0 3.54e-01 81.5% 67.6%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4342758 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.98 66.0 6.62e-01 70.4% 70.9%
4359947 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.93 68.0 6.29e-01 75.9% 64.6%
4010144 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.92 63.0 6.26e-01 70.4% 69.1%
3338097 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 65.0 6.46e-01 81.5% 85.5%
3974583 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.85 66.0 5.39e-01 83.3% 56.8%
3973679 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 66.0 5.60e-01 83.3% 62.4%
3975780 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.84 66.0 5.46e-01 83.3% 60.0%
3603554 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.84 67.0 5.56e-01 85.2% 61.1%
5066879 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.83 65.0 4.97e-01 83.3% 54.8%
3584355 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 62.0 5.83e-01 79.6% 78.5%
4297073 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.83 65.0 5.37e-01 83.3% 60.0%
4383339 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.83 64.0 5.26e-01 83.3% 56.8%
4154788 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.83 64.0 5.46e-01 83.3% 63.5%
4954184 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.83 64.0 5.34e-01 83.3% 60.0%
5052578 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.82 56.0 6.35e-01 70.4% 100.0%
4664006 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.82 64.0 5.33e-01 83.3% 60.0%
4102412 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.82 65.0 5.42e-01 85.2% 64.4%
3942606 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.82 64.0 5.41e-01 83.3% 63.5%
4624372 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.82 64.0 5.21e-01 83.3% 56.8%
3942800 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.82 64.0 5.52e-01 83.3% 67.5%
4046680 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.81 63.0 5.07e-01 83.3% 56.0%
3970403 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.81 64.0 5.35e-01 85.2% 60.0%
4297810 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.81 63.0 5.23e-01 83.3% 61.1%
3943933 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.80 62.0 5.17e-01 83.3% 60.0%
3968903 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.79 61.0 5.12e-01 83.3% 60.0%
4963466 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.79 57.0 6.15e-01 75.9% 91.1%
5025805 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 54.0 5.46e-01 72.2% 70.9%
3285795 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 62.0 6.19e-01 87.0% 94.5%
4653037 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.78 61.0 4.63e-01 83.3% 49.2%
5014241 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.78 54.0 4.60e-01 72.2% 48.2%
3967891 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.78 66.0 5.59e-01 90.7% 68.2%
4955851 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.78 63.0 4.24e-01 88.9% 28.5%
3986748 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.78 61.0 5.12e-01 85.2% 64.4%
3282193 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 61.0 6.31e-01 85.2% 100.0%
4380346 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.78 65.0 5.43e-01 90.7% 64.4%
4181900 589.1.2.1 alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C 0.78 57.0 3.84e-01 79.6% 22.0%
3283959 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 66.0 5.64e-01 98.1% 68.9%
3603167 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.77 63.0 6.04e-01 100.0% 78.5%
3969568 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 61.0 6.07e-01 87.0% 98.2%
3970777 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 59.0 4.96e-01 83.3% 60.0%
5062514 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.77 54.0 5.83e-01 74.1% 91.1%
5050961 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 54.0 6.11e-01 79.6% 100.0%
3956134 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 61.0 6.15e-01 87.0% 94.5%
3979933 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.76 64.0 5.24e-01 90.7% 61.1%
3284253 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.76 64.0 5.33e-01 90.7% 64.4%
3946198 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.76 64.0 5.43e-01 90.7% 68.2%
3943494 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.76 64.0 5.41e-01 90.7% 68.2%
3968724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 57.0 5.13e-01 81.5% 64.0%
3981547 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.76 63.0 5.19e-01 90.7% 61.1%
5053441 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.76 58.0 5.59e-01 87.0% 73.3%
4130151 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.76 63.0 5.25e-01 90.7% 64.4%
4215338 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.75 63.0 5.26e-01 90.7% 64.4%
4654073 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.75 57.0 5.03e-01 79.6% 57.3%
4484832 589.1.2.1 alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C 0.75 55.0 3.94e-01 79.6% 28.1%
3981080 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.75 63.0 5.34e-01 90.7% 68.2%
3947249 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.75 63.0 5.46e-01 90.7% 72.5%
3975572 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.75 62.0 5.21e-01 90.7% 64.4%
4010677 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.75 62.0 5.20e-01 98.1% 71.0%
3289244 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.75 63.0 5.98e-01 96.3% 90.8%
4875610 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.74 62.0 5.25e-01 90.7% 62.8%
3289875 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.74 64.0 5.47e-01 100.0% 77.8%
3283527 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.74 59.0 5.12e-01 85.2% 66.3%
5041148 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 57.0 5.27e-01 83.3% 64.3%
4443980 589.1.2.1 alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C 0.74 54.0 3.68e-01 79.6% 23.1%
4135755 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.74 61.0 5.13e-01 90.7% 64.4%
3968396 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.74 61.0 5.10e-01 90.7% 64.4%
3411416 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 50.0 5.44e-01 74.1% 88.6%
3966780 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 61.0 5.10e-01 90.7% 64.4%
4295835 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 51.0 5.44e-01 79.6% 88.9%
3964284 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 54.0 5.26e-01 81.5% 71.7%
4206579 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.73 60.0 4.97e-01 90.7% 61.1%
3288310 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.72 55.0 5.10e-01 83.3% 70.0%
4961280 101.1.2.939 alpha arrays › HTH › HTH › winged helix domain › PF26270 0.71 58.0 5.49e-01 92.6% 75.4%
3985435 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 50.0 5.47e-01 77.8% 100.0%
4492035 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.70 54.0 4.99e-01 83.3% 70.0%
5072203 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 54.0 5.63e-01 81.5% 92.0%
3962552 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.70 54.0 4.91e-01 83.3% 65.3%
2440126 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.70 54.0 4.73e-01 83.3% 61.0%
3947091 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.69 54.0 5.26e-01 83.3% 85.0%
3941460 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.69 55.0 5.18e-01 85.2% 80.0%
4159688 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.68 56.0 5.15e-01 90.7% 74.3%
359006 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.68 55.0 4.95e-01 90.7% 67.1%
5028152 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 53.0 5.01e-01 92.6% 72.3%
3968151 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.67 54.0 4.71e-01 90.7% 61.2%
5027752 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 51.0 4.52e-01 92.6% 57.5%
3981688 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.66 53.0 5.10e-01 96.3% 93.8%
3975610 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.65 52.0 4.85e-01 90.7% 74.3%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.62 50.0 4.90e-01 100.0% 90.0%
4993585 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.61 50.0 4.88e-01 96.3% 86.7%
3653791 3826.1.1.0 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.56 44.0 3.92e-01 85.2% 65.3%
4880662 141.1.1.8 alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2 0.55 46.0 2.92e-01 98.1% 70.4%
D2 high residues 98-346
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00149.34 best Metallophos 42.6 1.40e-10 67.1% 97.4%
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5iheB01 3.60.21.50 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › 0.82 76.0 6.97e-01 95.6% 89.0%
2kknA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.77 49.0 6.09e-01 91.6% 100.0%
3ck2A00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.76 50.0 5.94e-01 93.2% 93.7%
5karA01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.73 65.0 5.40e-01 92.8% 82.9%
7s0tF01 3.60.21.50 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › 0.71 65.0 5.99e-01 95.6% 91.7%
3floA02 3.60.21.60 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › 0.69 61.0 6.26e-01 94.0% 95.5%
3gveA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.66 59.0 5.30e-01 93.6% 92.2%
3gl3D00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 34.0 4.56e-01 99.6% 94.9%
3hdcA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 33.0 4.55e-01 100.0% 98.4%
3erwF00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.62 33.0 4.54e-01 99.2% 99.2%
2ljaA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.62 34.0 4.27e-01 100.0% 86.8%
1auiA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.61 55.0 4.72e-01 95.6% 68.3%
2l5oA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 33.0 4.18e-01 100.0% 87.3%
1fjmB00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.59 53.0 5.05e-01 95.6% 84.8%
3cynB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 37.0 4.31e-01 100.0% 88.4%
5h8iI00 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.57 50.0 4.77e-01 95.2% 87.4%
3aysA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.55 50.0 4.46e-01 97.6% 98.3%
2dkhA03 3.40.30.20 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Phenol hydroxylase, C-terminal dimerisation domain 0.55 34.0 3.72e-01 100.0% 71.4%
3k30A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 28.0 3.62e-01 75.9% 87.2%
3cqjA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.54 41.0 3.99e-01 76.7% 96.4%
8dgeA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 45.0 4.02e-01 88.8% 92.2%
1vliA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 47.0 4.47e-01 93.2% 90.8%
2qs7A00 3.40.1260.10 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like 0.54 31.0 4.02e-01 75.5% 100.0%
1gz1A00 3.20.20.40 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase 0.54 47.0 4.19e-01 94.4% 100.0%
1gp1A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 37.0 4.31e-01 100.0% 96.2%
1nj1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.53 25.0 3.60e-01 98.0% 100.0%
3dghA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 26.0 3.54e-01 75.1% 91.9%
4dnhA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 46.0 3.97e-01 94.4% 89.3%
2hisA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 45.0 4.20e-01 94.0% 97.4%
1j7gA00 3.50.80.10 Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase 0.51 28.0 3.63e-01 87.1% 92.4%
2lezA00 3.30.2450.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 0.51 24.0 3.21e-01 79.1% 85.0%
3dhuA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.50 45.0 4.09e-01 98.8% 98.6%
2nlyA00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.50 40.0 4.24e-01 92.4% 95.4%
1s3aA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.50 20.0 3.17e-01 89.6% 100.0%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5080277 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.92 84.0 8.54e-01 93.2% 100.0%
5022422 246.2.1.7 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.83 77.0 6.94e-01 95.6% 92.8%
4937076 246.2.1.7 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.83 77.0 7.17e-01 95.6% 98.6%
5053888 246.2.1.7 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.82 76.0 7.17e-01 95.2% 99.7%
4387412 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.82 76.0 6.75e-01 96.0% 85.2%
5082389 246.2.1.0 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases 0.82 75.0 7.07e-01 94.4% 94.1%
5038520 246.2.1.7 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.82 76.0 6.85e-01 95.6% 94.4%
5028043 246.2.1.7 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.82 76.0 6.91e-01 95.2% 92.6%
4934075 246.2.1.7 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.81 75.0 6.88e-01 95.2% 93.9%
3604495 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.81 76.0 6.73e-01 96.8% 89.3%
3212577 246.2.1.7 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.73 66.0 6.11e-01 94.4% 97.0%
3783068 246.2.1.7 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.73 66.0 5.95e-01 94.8% 93.3%
3743456 246.2.1.7 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.72 65.0 5.96e-01 94.4% 89.3%
4376563 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.72 64.0 6.36e-01 91.6% 96.9%
3711998 246.2.1.0 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases 0.72 65.0 5.40e-01 94.4% 80.2%
5032648 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.72 63.0 6.30e-01 91.6% 97.6%
5023985 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.71 64.0 6.02e-01 93.2% 90.0%
5077075 246.2.1.9 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.71 61.0 6.27e-01 94.8% 94.0%
5024200 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.71 66.0 6.51e-01 96.8% 98.5%
3931546 246.2.1.7 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.71 65.0 6.12e-01 95.6% 99.0%
4019942 246.2.1.0 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases 0.71 62.0 5.17e-01 91.6% 91.6%
5049204 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.70 61.0 5.41e-01 91.2% 100.0%
5083835 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.70 63.0 5.59e-01 94.4% 94.4%
3307963 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.70 61.0 5.35e-01 91.6% 85.6%
3924352 246.2.1.7 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.69 62.0 5.98e-01 94.4% 99.6%
3784693 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.69 61.0 5.48e-01 92.8% 85.4%
3831703 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.69 63.0 5.92e-01 96.4% 97.6%
3382987 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.69 63.0 5.94e-01 97.6% 96.7%
3494146 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.69 61.0 5.78e-01 92.8% 89.3%
4944784 246.2.1.0 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases 0.69 61.0 6.11e-01 93.2% 95.7%
5074670 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.68 62.0 6.33e-01 94.0% 98.3%
4944785 246.2.1.0 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases 0.68 62.0 6.12e-01 94.4% 91.9%
4649256 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.68 60.0 5.86e-01 91.2% 95.8%
3310233 246.2.1.7 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.67 63.0 5.62e-01 98.8% 95.5%
4964125 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.67 59.0 5.89e-01 92.8% 92.7%
4930638 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.63 57.0 5.69e-01 95.2% 92.3%
4985918 7545.1.1.1 a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrE 0.61 31.0 4.37e-01 75.5% 100.0%
3987799 4221.1.1.1 a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like › DUF1797 0.60 19.0 3.65e-01 75.1% 100.0%
4927043 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.59 54.0 5.00e-01 96.0% 86.6%
3960977 246.1.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase 0.56 46.0 4.93e-01 90.4% 99.5%
5018208 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.56 26.0 3.81e-01 71.1% 99.1%
3676583 2005.1.1.41 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C 0.55 35.0 3.94e-01 92.0% 81.1%
5001676 7604.1.1.1 a/b three-layered sandwiches › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_N 0.54 27.0 3.79e-01 85.5% 99.1%
5008418 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.53 30.0 3.85e-01 90.4% 95.2%
4841403 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.52 33.0 3.80e-01 93.6% 87.9%
5010710 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.52 35.0 3.77e-01 98.8% 78.1%
3955960 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.51 28.0 3.68e-01 94.8% 100.0%
3166134 2002.3.1.5 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_2 0.51 44.0 4.57e-01 92.0% 97.8%
3194851 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 31.0 3.30e-01 73.9% 66.5%
3487682 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.50 31.0 3.74e-01 94.8% 91.5%
5056384 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.50 34.0 3.70e-01 93.6% 82.5%
3594437 247.1.1.0 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.50 39.0 3.35e-01 78.7% 97.9%
9005 2002.3.1.5 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_2 0.50 40.0 4.24e-01 92.4% 95.4%