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IMGVR_UViG_3300002481_000051-3300002481-JGI24020J35080_100021768
Arc-VirIMGVR_UViG_3300002481_000051-3300002481-JGI24020J35080_100021768
Identity
- Kingdom:
- archaea
Quality
78.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-57
Domain cluster:
representative
CATH (75)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bv8A00 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.72 | 64.0 | 5.42e-01 | 100.0% | 65.9% |
| 1lfpA03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.72 | 62.0 | 5.63e-01 | 100.0% | 87.7% |
| 1mw7A03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.70 | 61.0 | 5.45e-01 | 100.0% | 92.0% |
| 3mahA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 59.0 | 5.46e-01 | 98.1% | 100.0% |
| 3v8vA01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.69 | 58.0 | 3.89e-01 | 96.2% | 28.8% |
| 3r8yA01 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.69 | 59.0 | 5.55e-01 | 100.0% | 84.8% |
| 1earA02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.68 | 55.0 | 5.10e-01 | 94.2% | 81.2% |
| 3tj8A02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.67 | 55.0 | 5.01e-01 | 96.2% | 79.7% |
| 2iboA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 56.0 | 4.84e-01 | 100.0% | 87.6% |
| 6k2eA01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 57.0 | 5.32e-01 | 100.0% | 92.6% |
| 4lowA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.67 | 53.0 | 4.61e-01 | 90.4% | 81.0% |
| 2j0wA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.67 | 54.0 | 4.91e-01 | 94.2% | 100.0% |
| 1gmuA01 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.67 | 54.0 | 5.03e-01 | 94.2% | 83.6% |
| 1yqhA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 57.0 | 4.65e-01 | 100.0% | 80.8% |
| 1vk8A00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 56.0 | 4.73e-01 | 100.0% | 87.1% |
| 4yn3B00 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.66 | 56.0 | 5.25e-01 | 96.2% | 87.7% |
| 1kgdA02 | 3.30.63.10 | Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › Guanylate Kinase phosphate binding domain | 0.66 | 45.0 | 4.35e-01 | 71.2% | 85.0% |
| 1zvpD00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.66 | 53.0 | 4.07e-01 | 100.0% | 37.4% |
| 2cpdA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.66 | 55.0 | 4.96e-01 | 98.1% | 97.3% |
| 1vi7A02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 53.0 | 4.89e-01 | 96.2% | 94.4% |
| 1s7hA01 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 56.0 | 4.93e-01 | 100.0% | 95.0% |
| 5gt8D02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.65 | 54.0 | 4.25e-01 | 100.0% | 54.1% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 56.0 | 4.52e-01 | 100.0% | 77.7% |
| 1ir6A02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.64 | 49.0 | 3.75e-01 | 86.5% | 39.5% |
| 2dgtA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.64 | 54.0 | 4.88e-01 | 98.1% | 98.6% |
| 7pliA03 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.64 | 52.0 | 4.73e-01 | 96.2% | 100.0% |
| 1b4bA00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.63 | 48.0 | 4.42e-01 | 84.6% | 80.3% |
| 1rzmA01 | 3.30.70.1140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 | 0.63 | 51.0 | 4.57e-01 | 98.1% | 81.2% |
| 1xxaC00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.62 | 45.0 | 4.12e-01 | 78.8% | 80.8% |
| 3s6gA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 52.0 | 3.72e-01 | 92.3% | 37.7% |
| 2pq0A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.62 | 46.0 | 3.96e-01 | 88.5% | 91.0% |
| 2g0cA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 51.0 | 4.74e-01 | 96.2% | 100.0% |
| 4k30A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 51.0 | 3.60e-01 | 90.4% | 35.3% |
| 2fphX02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 50.0 | 4.40e-01 | 100.0% | 86.4% |
| 4onyA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.61 | 42.0 | 2.65e-01 | 75.0% | 25.7% |
| 6uvuA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 41.0 | 3.35e-01 | 71.2% | 54.8% |
| 3cjsA00 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.60 | 52.0 | 5.08e-01 | 100.0% | 93.1% |
| 2phcB01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.60 | 47.0 | 4.08e-01 | 86.5% | 80.7% |
| 3t66A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.60 | 45.0 | 2.89e-01 | 80.8% | 27.5% |
| 2x49A02 | 3.40.5.40 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › FHIPEP family, domain 2 | 0.60 | 48.0 | 4.95e-01 | 98.1% | 100.0% |
| 2qvoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 41.0 | 3.51e-01 | 71.2% | 70.1% |
| 3tviA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.59 | 50.0 | 3.64e-01 | 100.0% | 49.1% |
| 1ixmB02 | 3.30.565.30 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Sporulation initiation phosphotransferase B (SpoOB), C-terminal domain | 0.59 | 44.0 | 3.60e-01 | 86.5% | 56.2% |
| 2eyqA07 | 3.90.1150.50 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain | 0.59 | 41.0 | 3.04e-01 | 75.0% | 35.4% |
| 3dgpB00 | 3.30.70.1220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TFB5-like | 0.58 | 41.0 | 4.00e-01 | 80.8% | 77.8% |
| 3oreA01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.58 | 43.0 | 4.14e-01 | 86.5% | 95.5% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 46.0 | 4.36e-01 | 98.1% | 100.0% |
| 3va7A05 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.58 | 44.0 | 3.69e-01 | 86.5% | 68.0% |
| 1q15A01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.58 | 49.0 | 3.32e-01 | 98.1% | 67.3% |
| 3mmlF01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.58 | 43.0 | 3.86e-01 | 82.7% | 72.2% |
| 3ipjA01 | 3.30.1360.60 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Glucose permease domain IIB | 0.58 | 43.0 | 3.87e-01 | 86.5% | 67.5% |
| 2kwaA00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.57 | 46.0 | 3.85e-01 | 96.2% | 85.1% |
| 1vk1A02 | 3.30.1760.10 | Alpha Beta › 2-Layer Sandwich › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 | 0.57 | 46.0 | 3.60e-01 | 98.1% | 93.1% |
| 1rp0A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 46.0 | 3.03e-01 | 94.2% | 75.4% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 38.0 | 3.16e-01 | 71.2% | 54.5% |
| 3jamK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 49.0 | 4.05e-01 | 100.0% | 77.1% |
| 5xyiK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 48.0 | 4.07e-01 | 100.0% | 81.1% |
| 1r1uB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 38.0 | 3.21e-01 | 71.2% | 61.3% |
| 4y4mC00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 44.0 | 2.92e-01 | 94.2% | 67.8% |
| 1kjwA03 | 3.30.63.10 | Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › Guanylate Kinase phosphate binding domain | 0.55 | 47.0 | 4.51e-01 | 96.2% | 93.4% |
| 5wt3A01 | 3.30.70.2580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 43.0 | 4.13e-01 | 98.1% | 87.7% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 37.0 | 3.23e-01 | 71.2% | 76.4% |
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 39.0 | 3.30e-01 | 76.9% | 62.4% |
| 4bpe700 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 45.0 | 3.76e-01 | 100.0% | 74.3% |
| 3wp0A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 47.0 | 3.26e-01 | 100.0% | 37.0% |
| 4a6dA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 36.0 | 3.11e-01 | 71.2% | 61.7% |
| 2zzzA02 | 3.30.63.10 | Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › Guanylate Kinase phosphate binding domain | 0.54 | 45.0 | 4.38e-01 | 96.2% | 93.3% |
| 3jsyA02 | 3.90.105.20 | Alpha Beta › Alpha-Beta Complex › Molybdopterin biosynthesis moea protein, domain 2 › Ribosomal protein L10, N-terminal fragment, domain II | 0.53 | 42.0 | 3.84e-01 | 98.1% | 77.5% |
| 4rs8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 36.0 | 3.17e-01 | 71.2% | 67.9% |
| 6nuiA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 44.0 | 3.10e-01 | 100.0% | 35.8% |
| 4n3pA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.52 | 40.0 | 2.86e-01 | 94.2% | 92.4% |
| 1q36A01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.51 | 42.0 | 2.97e-01 | 100.0% | 83.9% |
| 2rioA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 41.0 | 3.62e-01 | 100.0% | 58.5% |
| 6czfA01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.51 | 42.0 | 2.71e-01 | 100.0% | 87.5% |
| 1wqsA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 42.0 | 3.85e-01 | 100.0% | 70.0% |
ECOD (91)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030744 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.76 | 65.0 | 6.61e-01 | 96.2% | 100.0% |
| 5010216 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.75 | 66.0 | 6.01e-01 | 100.0% | 85.7% |
| 4461494 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.74 | 64.0 | 5.99e-01 | 100.0% | 92.3% |
| 4261832 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.74 | 64.0 | 5.98e-01 | 100.0% | 98.5% |
| 3989567 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.74 | 64.0 | 6.17e-01 | 100.0% | 98.3% |
| 5009657 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.74 | 64.0 | 5.85e-01 | 100.0% | 87.1% |
| 4058379 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.74 | 63.0 | 5.94e-01 | 100.0% | 96.9% |
| 5011764 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.73 | 63.0 | 5.54e-01 | 100.0% | 76.2% |
| 4042122 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.73 | 63.0 | 5.76e-01 | 100.0% | 91.4% |
| 4037308 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.73 | 63.0 | 5.42e-01 | 100.0% | 77.6% |
| 3588994 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.73 | 63.0 | 6.03e-01 | 98.1% | 98.3% |
| 4953062 | 3740.1.1.2 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › DUF2099 | 0.73 | 49.0 | 3.07e-01 | 100.0% | 13.5% |
| 5012422 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.72 | 64.0 | 5.55e-01 | 100.0% | 75.0% |
| 4115093 | 304.120.1.5 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmL_1st | 0.72 | 62.0 | 5.91e-01 | 96.2% | 100.0% |
| 4441866 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.72 | 62.0 | 5.83e-01 | 100.0% | 98.5% |
| 4048587 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.72 | 62.0 | 5.65e-01 | 100.0% | 94.3% |
| 4205064 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.72 | 62.0 | 5.67e-01 | 100.0% | 94.3% |
| 4931083 | 304.147.1.0 ↗ | a+b two layers › Alpha-beta plaits › Tetrahydrodipicolinate acetyltransferase N-terminal domain › Tetrahydrodipicolinate acetyltransferase N-terminal domain | 0.71 | 62.0 | 5.99e-01 | 100.0% | 100.0% |
| 4093818 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.71 | 61.0 | 5.51e-01 | 100.0% | 85.3% |
| 4622891 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.71 | 61.0 | 5.47e-01 | 100.0% | 85.3% |
| 5257 | 304.8.1.6 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_3 | 0.71 | 55.0 | 5.13e-01 | 96.2% | 68.2% |
| 4109303 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.70 | 60.0 | 5.38e-01 | 100.0% | 89.3% |
| 5022446 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.70 | 59.0 | 5.55e-01 | 98.1% | 93.8% |
| 4974982 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.70 | 61.0 | 5.85e-01 | 100.0% | 100.0% |
| 4959403 | 304.147.1.0 ↗ | a+b two layers › Alpha-beta plaits › Tetrahydrodipicolinate acetyltransferase N-terminal domain › Tetrahydrodipicolinate acetyltransferase N-terminal domain | 0.70 | 60.0 | 5.72e-01 | 96.2% | 96.7% |
| 4507546 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.70 | 60.0 | 5.54e-01 | 100.0% | 92.9% |
| 4029341 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.70 | 59.0 | 5.09e-01 | 98.1% | 97.6% |
| 4493767 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.70 | 60.0 | 5.52e-01 | 100.0% | 94.3% |
| 4886247 | 4143.1.1.10 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › RlmL_1st | 0.70 | 59.0 | 5.68e-01 | 96.2% | 100.0% |
| 4215184 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.69 | 60.0 | 5.48e-01 | 100.0% | 91.4% |
| 4653000 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.69 | 60.0 | 5.49e-01 | 100.0% | 91.4% |
| 5025092 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.69 | 55.0 | 4.93e-01 | 90.4% | 73.3% |
| 5044202 | 304.164.1.0 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein NegoA.19184.a C-terminal domain › Hypothetical protein NegoA.19184.a C-terminal domain | 0.69 | 59.0 | 5.41e-01 | 100.0% | 85.7% |
| 4502075 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.69 | 59.0 | 5.45e-01 | 100.0% | 88.6% |
| 4273411 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.69 | 59.0 | 5.53e-01 | 100.0% | 96.9% |
| 4965284 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.68 | 59.0 | 5.42e-01 | 100.0% | 91.4% |
| 3877589 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.68 | 53.0 | 5.12e-01 | 88.5% | 93.3% |
| 5057426 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.68 | 56.0 | 5.45e-01 | 96.2% | 90.0% |
| 4949564 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.68 | 56.0 | 5.41e-01 | 94.2% | 93.3% |
| 5076264 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.68 | 56.0 | 5.26e-01 | 94.2% | 98.5% |
| 5057658 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 56.0 | 5.37e-01 | 94.2% | 100.0% |
| 5055137 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.67 | 52.0 | 3.78e-01 | 86.5% | 41.3% |
| 5026454 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.67 | 54.0 | 5.15e-01 | 96.2% | 87.7% |
| 4958791 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.67 | 56.0 | 5.38e-01 | 98.1% | 98.3% |
| 5039575 | 2484.1.1.340 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Volactin | 0.66 | 57.0 | 4.08e-01 | 100.0% | 32.5% |
| 3253177 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.66 | 56.0 | 5.17e-01 | 98.1% | 95.7% |
| 3296203 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.66 | 56.0 | 5.25e-01 | 100.0% | 83.1% |
| 4032264 | 304.8.1.94 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DrrA1-3_C | 0.66 | 56.0 | 5.25e-01 | 100.0% | 95.4% |
| 4994631 | 304.120.1.5 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmL_1st | 0.65 | 54.0 | 5.25e-01 | 96.2% | 100.0% |
| 4952752 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 56.0 | 5.01e-01 | 100.0% | 84.0% |
| 4940504 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.65 | 53.0 | 5.13e-01 | 96.2% | 98.3% |
| 2507085 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.64 | 54.0 | 5.18e-01 | 98.1% | 92.1% |
| 5007506 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.63 | 52.0 | 4.58e-01 | 100.0% | 74.1% |
| 3972746 | 306.6.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › CT_C_D | 0.63 | 49.0 | 4.30e-01 | 86.5% | 83.7% |
| 2831815 | 101.1.2.47 ↗ | alpha arrays › HTH › HTH › winged helix domain › S10_plectin | 0.62 | 42.0 | 3.72e-01 | 71.2% | 74.1% |
| 4959707 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.62 | 51.0 | 4.83e-01 | 96.2% | 100.0% |
| 3538411 | 213.1.1.11 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › NAT | 0.62 | 51.0 | 3.58e-01 | 90.4% | 34.8% |
| 3280833 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.62 | 54.0 | 5.18e-01 | 100.0% | 96.7% |
| 4858172 | 3517.1.1.2 ↗ | a+b complex topology › Polymerase acidic protein › Polymerase acidic protein › Polymerase acidic protein › Bunya_RdRp | 0.62 | 42.0 | 2.71e-01 | 71.2% | 15.4% |
| None | — | 0.62 | 52.0 | 3.70e-01 | 92.3% | 37.2% | |
| 3183588 | 12.1.1.116 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Tfb2 | 0.62 | 52.0 | 4.30e-01 | 100.0% | 81.0% |
| 4958064 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.61 | 50.0 | 4.76e-01 | 96.2% | 98.5% |
| 4052194 | 306.2.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor › Arg_repressor_C | 0.61 | 47.0 | 4.09e-01 | 86.5% | 69.4% |
| 3967558 | 306.6.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › CT_C_D | 0.61 | 47.0 | 4.08e-01 | 86.5% | 78.8% |
| 3946500 | 306.1.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Glucose permease domain IIB › Glucose permease domain IIB › PTS_EIIB | 0.61 | 46.0 | 4.06e-01 | 84.6% | 66.3% |
| 4004341 | 101.1.2.775 ↗ | alpha arrays › HTH › HTH › winged helix domain › SieB | 0.61 | 41.0 | 3.59e-01 | 71.2% | 52.9% |
| 5060568 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.60 | 47.0 | 4.60e-01 | 96.2% | 98.3% |
| 3489274 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 51.0 | 3.68e-01 | 100.0% | 63.1% |
| 3935509 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 49.0 | 4.06e-01 | 98.1% | 79.0% |
| 4324737 | 306.1.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › Glucose permease domain IIB › Glucose permease domain IIB | 0.59 | 44.0 | 4.01e-01 | 84.6% | 66.7% |
| 4012218 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.58 | 47.0 | 3.01e-01 | 92.3% | 68.1% |
| None | — | 0.58 | 47.0 | 2.93e-01 | 92.3% | 57.6% | |
| 2755329 | 3253.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA | 0.57 | 45.0 | 4.56e-01 | 94.2% | 98.0% |
| 3603106 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.57 | 42.0 | 3.73e-01 | 84.6% | 63.5% |
| 4244248 | 210.1.3.2 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › CarA_N | 0.57 | 49.0 | 3.28e-01 | 98.1% | 67.8% |
| 3784944 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.57 | 46.0 | 2.91e-01 | 100.0% | 25.8% |
| 11004 | 5103.1.1.1 ↗ | a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › DUF5603 | 0.56 | 42.0 | 3.61e-01 | 90.4% | 97.0% |
| 4936288 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.56 | 44.0 | 4.33e-01 | 100.0% | 95.0% |
| 5077630 | 2484.1.1.340 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Volactin | 0.55 | 45.0 | 3.31e-01 | 100.0% | 33.3% |
| 3499297 | 101.1.2.113 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNase_H2-Ydr279 | 0.54 | 37.0 | 2.91e-01 | 73.1% | 45.8% |
| 4305751 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.53 | 46.0 | 3.15e-01 | 100.0% | 33.8% |
| 3230011 | 6106.1.1.0 ↗ | extended segments › Photosystem II protein Y, psbY › Photosystem II protein Y, psbY › Photosystem II protein Y, psbY | 0.53 | 37.0 | 3.30e-01 | 78.8% | 80.0% |
| 4354223 | 2004.1.1.192 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 | 0.53 | 46.0 | 3.16e-01 | 100.0% | 33.0% |
| 4461479 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.52 | 45.0 | 3.09e-01 | 100.0% | 35.7% |
| 3580834 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.52 | 44.0 | 3.02e-01 | 100.0% | 33.0% |
| 3219532 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.51 | 42.0 | 3.20e-01 | 100.0% | 48.3% |
| 4477375 | 2004.1.1.192 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 | 0.51 | 44.0 | 3.07e-01 | 100.0% | 32.8% |
| 4061553 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.51 | 44.0 | 3.09e-01 | 100.0% | 33.9% |
| 5050242 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.51 | 44.0 | 3.00e-01 | 100.0% | 31.4% |
| 4002879 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.50 | 43.0 | 2.93e-01 | 100.0% | 26.3% |
| 4510425 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.50 | 43.0 | 3.03e-01 | 100.0% | 33.9% |