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IMGVR_UViG_3300002484_001658-3300002484-JGI25129J35166_100094110

Arc-Vir

IMGVR_UViG_3300002484_001658-3300002484-JGI25129J35166_100094110

Quality

90.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-82
PDB
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.72 58.0 5.98e-01 98.8% 89.6%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 43.0 5.15e-01 91.3% 98.0%
4bi3A01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.70 48.0 4.61e-01 98.8% 62.6%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 45.0 4.72e-01 98.8% 78.9%
2yrvA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 55.0 4.91e-01 95.0% 77.9%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 40.0 4.74e-01 90.0% 100.0%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 46.0 4.99e-01 95.0% 95.4%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 44.0 4.57e-01 97.5% 79.5%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 38.0 4.63e-01 85.0% 100.0%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.63 41.0 4.63e-01 85.0% 98.1%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.62 39.0 4.62e-01 90.0% 100.0%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.62 40.0 4.43e-01 86.3% 91.2%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 40.0 4.58e-01 86.3% 100.0%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.61 38.0 4.37e-01 85.0% 96.2%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 36.0 4.33e-01 77.5% 100.0%
2daqA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 52.0 4.71e-01 97.5% 88.2%
2hq9B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 43.0 3.65e-01 76.2% 70.8%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 41.0 4.70e-01 81.2% 100.0%
5bncB01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 43.0 3.51e-01 76.2% 64.4%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.59 47.0 3.58e-01 97.5% 35.2%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.59 34.0 4.14e-01 77.5% 97.8%
2w5eA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 35.0 3.65e-01 87.5% 63.5%
4ffkA02 3.55.40.20 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain 0.58 40.0 3.39e-01 86.3% 45.5%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 41.0 4.59e-01 86.3% 100.0%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 42.0 3.45e-01 76.2% 51.0%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 39.0 4.52e-01 82.5% 100.0%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 41.0 4.52e-01 86.3% 96.8%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 41.0 3.34e-01 75.0% 62.9%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 47.0 4.71e-01 98.8% 87.7%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 40.0 4.47e-01 82.5% 100.0%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 42.0 4.28e-01 88.7% 79.7%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 40.0 4.45e-01 86.3% 100.0%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 41.0 4.56e-01 86.3% 100.0%
2e5kA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 42.0 4.58e-01 90.0% 98.4%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 49.0 4.63e-01 98.8% 93.8%
3i35A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 39.0 4.39e-01 85.0% 100.0%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 41.0 4.38e-01 83.7% 92.5%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 44.0 4.62e-01 100.0% 97.2%
3k6yA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 34.0 3.26e-01 87.5% 52.2%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 39.0 4.33e-01 82.5% 100.0%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 39.0 4.22e-01 83.7% 93.8%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 38.0 4.00e-01 86.3% 82.9%
7ctpA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 42.0 3.64e-01 82.5% 88.3%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 42.0 4.31e-01 87.5% 87.2%
1ve2B02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.54 38.0 3.39e-01 100.0% 51.3%
4fgoA00 3.10.620.30 Alpha Beta › Roll › C8orf32 fold › 0.53 44.0 3.36e-01 88.7% 40.3%
2htiA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 38.0 3.34e-01 76.2% 56.3%
2zbbA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 33.0 3.34e-01 76.2% 60.5%
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 36.0 3.39e-01 92.5% 56.4%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.53 47.0 3.58e-01 100.0% 44.1%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 42.0 4.29e-01 90.0% 92.1%
1dleB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 43.0 3.66e-01 95.0% 78.9%
2hqvA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.52 45.0 3.59e-01 100.0% 58.1%
3ef2A02 3.30.460.70 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.52 45.0 3.78e-01 96.2% 94.2%
2ok5A02 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.51 42.0 3.20e-01 95.0% 60.3%
5exvC00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.51 44.0 3.55e-01 100.0% 61.2%
2k2jA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 40.0 3.51e-01 85.0% 83.8%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 36.0 2.74e-01 76.2% 51.7%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.50 39.0 4.16e-01 91.3% 100.0%
2asfA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 36.0 3.16e-01 76.2% 56.8%
4ecnA01 2.60.40.3540 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 0.50 37.0 3.48e-01 100.0% 62.1%
3hrzC01 2.20.210.20 Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › 0.50 30.0 3.59e-01 86.3% 98.0%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 41.0 4.19e-01 91.3% 93.5%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3290160 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.75 60.0 6.02e-01 97.5% 85.0%
4071824 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.73 59.0 6.11e-01 98.8% 92.0%
4069560 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 60.0 6.24e-01 96.2% 94.7%
3978997 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.72 63.0 5.91e-01 100.0% 78.9%
3519122 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.72 61.0 5.91e-01 100.0% 82.2%
3289944 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.70 56.0 5.42e-01 100.0% 76.7%
3358753 4.1.1.381 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 0.70 47.0 3.69e-01 100.0% 33.3%
3280641 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.70 60.0 5.59e-01 98.8% 75.0%
3584571 4.1.1.56 beta barrels › SH3 › SH3 › SH3 › RBB1NT 0.68 59.0 4.27e-01 98.8% 41.3%
3252725 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.65 52.0 4.75e-01 87.5% 91.4%
4642857 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.71e-01 97.5% 95.0%
3938287 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 56.0 5.05e-01 97.5% 86.4%
3992765 4.1.1.56 beta barrels › SH3 › SH3 › SH3 › RBB1NT 0.64 56.0 5.15e-01 98.8% 87.6%
3504586 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.63 40.0 3.17e-01 87.5% 32.9%
3353828 4.1.1.321 beta barrels › SH3 › SH3 › SH3 › PF26734 0.63 56.0 5.03e-01 98.8% 84.5%
4425420 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 56.0 5.55e-01 100.0% 91.8%
547 4.1.1.49 beta barrels › SH3 › SH3 › SH3 › KorB_C 0.63 40.0 4.59e-01 88.7% 94.4%
3849311 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 45.0 5.03e-01 90.0% 100.0%
1323187 219.1.1.38 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C93 0.63 44.0 3.39e-01 87.5% 32.6%
3523802 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 44.0 4.87e-01 88.7% 98.3%
3317456 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.62 48.0 4.50e-01 85.0% 68.0%
3842631 4.1.1.243 beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.62 44.0 4.62e-01 90.0% 85.7%
3765126 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 41.0 4.72e-01 81.2% 100.0%
3770399 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.61 53.0 4.84e-01 98.8% 89.1%
1140051 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 37.0 4.44e-01 78.8% 100.0%
3423334 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.61 50.0 4.31e-01 92.5% 73.8%
3408588 4.1.1.243 beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.60 40.0 4.28e-01 83.7% 78.6%
3281618 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.60 52.0 4.87e-01 98.8% 81.0%
3404158 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.59 51.0 4.59e-01 97.5% 84.3%
3726709 9.15.1.1 beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD 0.59 51.0 3.74e-01 100.0% 73.8%
3912956 4.1.1.56 beta barrels › SH3 › SH3 › SH3 › RBB1NT 0.59 50.0 4.40e-01 95.0% 75.0%
5053225 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 53.0 4.96e-01 100.0% 84.0%
3486189 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 42.0 4.68e-01 83.7% 100.0%
3222195 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.59 44.0 4.77e-01 93.8% 100.0%
3482868 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.59 39.0 4.52e-01 85.0% 100.0%
3721787 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 52.0 5.09e-01 97.5% 92.9%
3288278 1.1.5.31 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.58 41.0 3.56e-01 76.2% 74.1%
3469800 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 42.0 4.27e-01 83.7% 77.5%
3917464 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 43.0 4.67e-01 91.3% 98.5%
3479037 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 43.0 4.39e-01 91.3% 81.2%
4082863 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 41.0 4.31e-01 83.7% 85.7%
3279818 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.57 41.0 3.37e-01 75.0% 42.4%
3213215 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 50.0 4.49e-01 100.0% 90.4%
3923813 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 42.0 4.54e-01 92.5% 98.5%
4952973 4.15.1.0 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like 0.56 50.0 4.86e-01 100.0% 96.7%
3879172 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.56 42.0 4.57e-01 86.3% 98.5%
1138340 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.56 40.0 3.25e-01 75.0% 60.5%
3930461 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 41.0 4.26e-01 88.7% 85.3%
3766868 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 44.0 4.25e-01 96.2% 77.8%
3695780 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 40.0 4.06e-01 90.0% 77.5%
4097843 4.11.1.6 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › PF31032 0.55 47.0 3.76e-01 95.0% 56.9%
4946849 1.1.5.15 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red 0.54 39.0 3.02e-01 88.7% 35.3%
58 1.1.5.31 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.53 38.0 3.34e-01 76.2% 56.3%
3763497 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.53 42.0 4.36e-01 87.5% 92.0%
3570230 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.53 45.0 4.34e-01 93.8% 83.3%
3396951 4.1.1.330 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.53 44.0 2.89e-01 96.2% 61.0%
3231704 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.52 38.0 4.14e-01 91.3% 95.4%
3688269 219.1.1.50 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH_1 0.51 45.0 2.73e-01 98.8% 34.3%
3686686 219.1.1.112 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 0.50 44.0 2.77e-01 98.8% 56.4%
3184022 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.50 43.0 3.76e-01 100.0% 70.8%