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IMGVR_UViG_3300002485_000066-3300002485-C687J35088_100008703
Arc-VirIMGVR_UViG_3300002485_000066-3300002485-C687J35088_100008703
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-50
Domain cluster:
representative
CATH (83)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hnoA01 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.82 | 71.0 | 4.62e-01 | 100.0% | 28.5% |
| 1j09A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.77 | 65.0 | 4.95e-01 | 100.0% | 40.5% |
| 1nzjA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.77 | 62.0 | 4.62e-01 | 98.0% | 34.1% |
| 1usgA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.77 | 62.0 | 4.49e-01 | 98.0% | 31.9% |
| 3bzcA03 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.77 | 65.0 | 4.93e-01 | 100.0% | 50.8% |
| 7va8A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.75 | 56.0 | 3.53e-01 | 100.0% | 15.6% |
| 1hyhA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.75 | 67.0 | 4.80e-01 | 100.0% | 35.5% |
| 1dnpA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.75 | 63.0 | 4.71e-01 | 100.0% | 36.9% |
| 1qrsA05 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.75 | 64.0 | 4.82e-01 | 98.0% | 39.8% |
| 1u3dA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.75 | 65.0 | 4.58e-01 | 100.0% | 31.1% |
| 1wp9A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 64.0 | 4.61e-01 | 100.0% | 66.4% |
| 1jmvA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.74 | 64.0 | 4.62e-01 | 100.0% | 35.0% |
| 3lp8A01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.73 | 56.0 | 4.57e-01 | 94.0% | 45.7% |
| 4u63A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.73 | 63.0 | 4.36e-01 | 100.0% | 28.7% |
| 4ifeA02 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.73 | 58.0 | 3.88e-01 | 100.0% | 21.1% |
| 3hxlA03 | 3.40.50.11790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.73 | 62.0 | 4.92e-01 | 98.0% | 47.6% |
| 2uv8A01 | 3.90.25.70 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › | 0.72 | 60.0 | 5.03e-01 | 98.0% | 59.1% |
| 3mfqA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.72 | 61.0 | 4.58e-01 | 100.0% | 48.9% |
| 6r8gA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.72 | 63.0 | 4.57e-01 | 100.0% | 35.9% |
| 4ernA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 60.0 | 3.92e-01 | 94.0% | 26.2% |
| 3f4wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 58.0 | 3.88e-01 | 100.0% | 22.3% |
| 4uulA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.71 | 58.0 | 4.29e-01 | 100.0% | 38.2% |
| 3lzdA01 | 3.40.50.11840 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Diphthamide synthesis DPH1/DPH2 domain 1 | 0.71 | 58.0 | 4.82e-01 | 100.0% | 50.5% |
| 3bmxA02 | 3.40.50.1700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycoside hydrolase family 3 C-terminal domain | 0.71 | 59.0 | 3.84e-01 | 96.0% | 21.1% |
| 2d4aD01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.71 | 61.0 | 4.44e-01 | 100.0% | 35.5% |
| 6ecpB01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.71 | 50.0 | 3.61e-01 | 76.0% | 26.9% |
| 3eyeA00 | 3.40.35.10 | Alpha Beta › 3-Layer(aba) Sandwich › Fructose Permease › Phosphotransferase system, sorbose subfamily IIB component | 0.70 | 60.0 | 4.33e-01 | 100.0% | 33.3% |
| 4gu5B01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.70 | 60.0 | 4.43e-01 | 100.0% | 36.5% |
| 1xmxA01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.70 | 58.0 | 4.33e-01 | 100.0% | 43.0% |
| 1oywA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 59.0 | 4.42e-01 | 100.0% | 73.5% |
| 4bgvA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.70 | 60.0 | 4.30e-01 | 100.0% | 36.9% |
| 5x4kA01 | 3.90.1640.30 | Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › | 0.68 | 59.0 | 4.01e-01 | 100.0% | 28.0% |
| 1pdaA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.68 | 47.0 | 3.75e-01 | 74.0% | 35.8% |
| 2hpiA01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.68 | 55.0 | 3.57e-01 | 100.0% | 24.4% |
| 5u9cC02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.68 | 56.0 | 5.01e-01 | 100.0% | 64.9% |
| 4evsA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 57.0 | 4.03e-01 | 100.0% | 32.2% |
| 5elmA02 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.68 | 57.0 | 4.51e-01 | 100.0% | 69.6% |
| 5fbhA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 57.0 | 3.94e-01 | 100.0% | 29.4% |
| 7d73E01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.67 | 57.0 | 3.81e-01 | 100.0% | 27.2% |
| 2uvgA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.67 | 46.0 | 3.26e-01 | 76.0% | 23.2% |
| 3e0mC01 | 3.30.1060.10 | Alpha Beta › 2-Layer Sandwich › Peptide Methionine Sulfoxide Reductase; Chain A › Peptide methionine sulphoxide reductase MsrA | 0.66 | 53.0 | 3.90e-01 | 100.0% | 38.4% |
| 7ml0001 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 55.0 | 3.64e-01 | 100.0% | 35.2% |
| 8ebtA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 54.0 | 3.83e-01 | 100.0% | 85.5% |
| 3huuC02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 54.0 | 4.12e-01 | 100.0% | 37.6% |
| 5z6bA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.65 | 45.0 | 3.15e-01 | 74.0% | 23.3% |
| 3ry3A02 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.65 | 54.0 | 3.56e-01 | 100.0% | 58.3% |
| 2wjwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 52.0 | 3.79e-01 | 100.0% | 30.7% |
| 2dm9A00 | 3.30.2320.30 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › ATP synthase, E subunit, C-terminal | 0.64 | 52.0 | 4.14e-01 | 100.0% | 42.4% |
| 3ugsB00 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.64 | 51.0 | 3.55e-01 | 100.0% | 70.2% |
| 1rrmA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 50.0 | 3.61e-01 | 100.0% | 32.1% |
| 3rc3A04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 52.0 | 3.78e-01 | 94.0% | 64.8% |
| 2ynmD01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.63 | 52.0 | 3.87e-01 | 100.0% | 40.8% |
| 5exeA01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.63 | 53.0 | 3.45e-01 | 100.0% | 30.4% |
| 5kztA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.63 | 53.0 | 3.53e-01 | 100.0% | 62.1% |
| 4fajA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.63 | 52.0 | 3.51e-01 | 100.0% | 60.4% |
| 6acsA00 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.63 | 50.0 | 3.42e-01 | 100.0% | 42.7% |
| 2c61A00 | 3.40.50.12240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 53.0 | 3.12e-01 | 100.0% | 40.1% |
| 1powA01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.62 | 50.0 | 3.56e-01 | 100.0% | 59.8% |
| 2xxpA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.62 | 51.0 | 4.18e-01 | 100.0% | 54.3% |
| 1fpzC00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.62 | 53.0 | 3.67e-01 | 100.0% | 36.5% |
| 1m0wA04 | 3.40.50.1760 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic | 0.62 | 50.0 | 3.91e-01 | 100.0% | 72.1% |
| 2qtcA02 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.62 | 50.0 | 3.42e-01 | 100.0% | 55.5% |
| 3fj1A01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.62 | 48.0 | 3.38e-01 | 94.0% | 26.9% |
| 4q8rA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.61 | 41.0 | 3.30e-01 | 72.0% | 34.2% |
| 3edgA00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.61 | 43.0 | 2.97e-01 | 78.0% | 26.2% |
| 5lstA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 49.0 | 3.34e-01 | 100.0% | 76.7% |
| 8jx6B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 48.0 | 3.39e-01 | 100.0% | 29.0% |
| 4v19S00 | 3.30.420.80 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 | 0.60 | 47.0 | 3.56e-01 | 94.0% | 58.0% |
| 6hxqA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 49.0 | 3.80e-01 | 100.0% | 65.1% |
| 4m1aA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.60 | 47.0 | 3.79e-01 | 92.0% | 86.0% |
| 1jj2F00 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.60 | 48.0 | 3.79e-01 | 100.0% | 40.3% |
| 1eljA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.60 | 43.0 | 3.03e-01 | 82.0% | 22.4% |
| 3lybC00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.59 | 48.0 | 3.73e-01 | 100.0% | 41.8% |
| 4hw8A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 42.0 | 3.00e-01 | 82.0% | 23.0% |
| 1lw7A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 47.0 | 3.48e-01 | 100.0% | 44.3% |
| 6yj5q01 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.58 | 46.0 | 3.69e-01 | 100.0% | 59.3% |
| 6vu9A02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.58 | 46.0 | 3.05e-01 | 100.0% | 24.1% |
| 3dm0A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 49.0 | 2.94e-01 | 100.0% | 69.5% |
| 3euaF01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.57 | 44.0 | 3.27e-01 | 94.0% | 49.4% |
| 2b5eA03 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 38.0 | 3.06e-01 | 76.0% | 31.5% |
| 1vx2M00 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.55 | 44.0 | 3.46e-01 | 100.0% | 38.7% |
| 2qi2A03 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.55 | 47.0 | 3.94e-01 | 100.0% | 55.3% |
| 2eyqA04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 44.0 | 2.94e-01 | 100.0% | 19.7% |
ECOD (87)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2120554 | 2007.1.4.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › PFK | 0.82 | 71.0 | 5.10e-01 | 100.0% | 34.2% |
| 2050249 | 2007.1.4.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › PFK | 0.81 | 71.0 | 4.91e-01 | 100.0% | 29.8% |
| 5011980 | 2007.1.16.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn | 0.80 | 72.0 | 5.77e-01 | 100.0% | 52.6% |
| 1806491 | 2007.1.4.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › PFK | 0.79 | 67.0 | 4.39e-01 | 100.0% | 29.2% |
| 3286059 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.78 | 67.0 | 4.64e-01 | 100.0% | 29.1% |
| 3519741 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.77 | 64.0 | 4.84e-01 | 100.0% | 39.2% |
| 4428241 | 2007.1.16.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn | 0.77 | 66.0 | 5.18e-01 | 100.0% | 47.3% |
| 3607648 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.75 | 65.0 | 3.94e-01 | 100.0% | 31.6% |
| 9800 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.75 | 65.0 | 4.43e-01 | 100.0% | 27.0% |
| 3386738 | 2003.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Ldh_1_N | 0.73 | 63.0 | 4.62e-01 | 100.0% | 36.4% |
| 4326257 | 2006.1.3.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 | 0.73 | 63.0 | 4.88e-01 | 100.0% | 50.4% |
| 4973872 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.73 | 63.0 | 4.67e-01 | 100.0% | 37.0% |
| 1514641 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.73 | 63.0 | 4.23e-01 | 100.0% | 25.1% |
| 3280738 | 2007.1.4.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain | 0.73 | 61.0 | 5.08e-01 | 100.0% | 66.3% |
| 4974199 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.72 | 62.0 | 4.60e-01 | 100.0% | 48.9% |
| 3304400 | 2007.1.16.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn | 0.72 | 61.0 | 4.97e-01 | 100.0% | 54.0% |
| 3838964 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.72 | 50.0 | 3.71e-01 | 76.0% | 30.0% |
| 4070514 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.72 | 62.0 | 4.11e-01 | 100.0% | 23.8% |
| 3980670 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 64.0 | 3.54e-01 | 100.0% | 7.5% |
| 4935147 | 2007.1.16.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn | 0.72 | 61.0 | 5.11e-01 | 100.0% | 64.4% |
| 3198747 | 2007.1.16.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn | 0.72 | 61.0 | 4.59e-01 | 100.0% | 38.5% |
| 3863047 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.72 | 61.0 | 4.15e-01 | 100.0% | 27.2% |
| 1507866 | 2003.1.5.50 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TylF | 0.71 | 60.0 | 5.63e-01 | 100.0% | 78.1% |
| 3800610 | 2004.1.1.24 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C | 0.71 | 59.0 | 3.66e-01 | 100.0% | 31.1% |
| 4055018 | 2003.1.8.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › CoA_binding_3 | 0.71 | 58.0 | 4.39e-01 | 100.0% | 36.9% |
| 3806511 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.71 | 60.0 | 4.39e-01 | 98.0% | 36.4% |
| 4088260 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.70 | 58.0 | 3.55e-01 | 100.0% | 14.8% |
| 4155270 | 2006.1.3.8 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4,RecR_C | 0.70 | 58.0 | 4.48e-01 | 100.0% | 40.0% |
| 3513884 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.70 | 56.0 | 3.93e-01 | 100.0% | 28.4% |
| 5060575 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.70 | 57.0 | 4.57e-01 | 98.0% | 51.8% |
| 4109031 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.70 | 56.0 | 3.36e-01 | 100.0% | 11.6% |
| 3680000 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.69 | 57.0 | 3.76e-01 | 100.0% | 24.5% |
| 4199049 | 101.8.1.5 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1c | 0.69 | 56.0 | 3.36e-01 | 100.0% | 11.7% |
| 4383623 | 2004.1.1.32 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C,UvrB | 0.69 | 58.0 | 3.96e-01 | 100.0% | 52.0% |
| 4971774 | 2007.1.11.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains | 0.69 | 56.0 | 4.26e-01 | 100.0% | 36.3% |
| 5021625 | 2007.1.5.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like | 0.69 | 58.0 | 4.83e-01 | 100.0% | 56.8% |
| None | — | 0.69 | 56.0 | 3.33e-01 | 100.0% | 11.6% | |
| 5017560 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.69 | 56.0 | 4.49e-01 | 100.0% | 60.0% |
| 3915450 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.69 | 57.0 | 4.63e-01 | 100.0% | 50.5% |
| 3170343 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.68 | 57.0 | 3.85e-01 | 100.0% | 40.0% |
| 3998864 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.68 | 56.0 | 4.31e-01 | 100.0% | 43.1% |
| 3486959 | 2007.1.16.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 | 0.68 | 56.0 | 4.63e-01 | 100.0% | 52.0% |
| 4948319 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.68 | 56.0 | 4.16e-01 | 100.0% | 51.0% |
| 3928585 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.68 | 56.0 | 3.68e-01 | 96.0% | 40.4% |
| 3737843 | 2485.1.1.43 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_6 | 0.68 | 47.0 | 3.00e-01 | 76.0% | 31.6% |
| 3400185 | 2007.1.2.31 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › LBD_receptor | 0.68 | 57.0 | 3.98e-01 | 100.0% | 32.8% |
| 4947940 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.67 | 56.0 | 3.51e-01 | 100.0% | 18.7% |
| 3224228 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.67 | 57.0 | 4.22e-01 | 100.0% | 35.7% |
| 3635155 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.67 | 55.0 | 3.70e-01 | 100.0% | 37.8% |
| 4938168 | 2007.1.16.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn | 0.67 | 56.0 | 4.70e-01 | 100.0% | 60.0% |
| 3589167 | 2004.1.1.62 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 | 0.67 | 56.0 | 4.19e-01 | 100.0% | 55.0% |
| 4113556 | 7574.1.1.0 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) | 0.67 | 55.0 | 3.83e-01 | 100.0% | 28.9% |
| 3944702 | 7574.1.1.7 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_N | 0.67 | 55.0 | 3.77e-01 | 100.0% | 60.0% |
| 3596022 | 2007.1.7.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes | 0.66 | 55.0 | 3.87e-01 | 100.0% | 32.2% |
| 3580753 | 2004.1.1.194 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_2 | 0.66 | 54.0 | 3.43e-01 | 100.0% | 29.8% |
| 5015704 | 2006.1.3.6 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 | 0.66 | 55.0 | 4.30e-01 | 100.0% | 55.0% |
| 5083165 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.66 | 54.0 | 3.51e-01 | 100.0% | 20.8% |
| 3968490 | 2484.6.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR › ExbD | 0.66 | 54.0 | 4.68e-01 | 98.0% | 57.6% |
| 3968160 | 2007.1.7.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH | 0.66 | 54.0 | 3.79e-01 | 100.0% | 27.6% |
| 3255953 | 2004.1.1.24 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C | 0.66 | 55.0 | 3.13e-01 | 100.0% | 16.8% |
| 2761420 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.65 | 53.0 | 3.50e-01 | 100.0% | 20.1% |
| 3518589 | 101.1.2.591 ↗ | alpha arrays › HTH › HTH › winged helix domain › ssDNA_TraI_N | 0.65 | 52.0 | 3.34e-01 | 100.0% | 16.6% |
| 3615680 | 2007.1.2.27 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_A-cyclase | 0.64 | 51.0 | 4.01e-01 | 100.0% | 41.5% |
| 3946680 | 2007.1.7.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH | 0.64 | 53.0 | 3.77e-01 | 100.0% | 57.8% |
| 5008539 | 2007.1.7.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH | 0.64 | 54.0 | 3.69e-01 | 100.0% | 30.5% |
| 3059315 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.64 | 52.0 | 3.98e-01 | 100.0% | 37.4% |
| 3600748 | 7579.1.1.9 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Esterase | 0.64 | 53.0 | 3.44e-01 | 100.0% | 35.3% |
| 3971879 | 2007.1.7.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes | 0.64 | 51.0 | 3.65e-01 | 100.0% | 28.3% |
| 4114333 | 2007.2.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins | 0.64 | 52.0 | 4.04e-01 | 100.0% | 43.8% |
| 10905 | 2007.1.7.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH | 0.64 | 50.0 | 3.61e-01 | 100.0% | 32.1% |
| 2640308 | 7512.1.1.13 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › PS_pyruv_trans | 0.63 | 52.0 | 3.81e-01 | 96.0% | 50.7% |
| 4989339 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.63 | 53.0 | 3.58e-01 | 100.0% | 25.2% |
| 3980816 | 3261.1.1.0 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb | 0.63 | 49.0 | 4.43e-01 | 92.0% | 81.3% |
| 1564348 | 7574.1.1.4 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › POR_N | 0.63 | 52.0 | 3.42e-01 | 100.0% | 30.4% |
| None | — | 0.62 | 53.0 | 3.65e-01 | 100.0% | 35.1% | |
| 4999732 | 4002.1.1.5 ↗ | alpha bundles › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › ADH_Fe_C | 0.62 | 50.0 | 3.01e-01 | 100.0% | 12.3% |
| 4944531 | 7574.1.1.4 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › POR_N | 0.62 | 52.0 | 3.37e-01 | 100.0% | 30.4% |
| 3742314 | 2004.1.1.499 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2, Helicase_C_2 | 0.62 | 49.0 | 2.86e-01 | 100.0% | 27.3% |
| 5024497 | 2007.6.1.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › bact-PGI_C | 0.62 | 49.0 | 3.57e-01 | 100.0% | 47.4% |
| 4999730 | 4002.1.1.0 ↗ | alpha bundles › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes | 0.62 | 51.0 | 3.56e-01 | 100.0% | 28.1% |
| 3587075 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.62 | 52.0 | 3.66e-01 | 100.0% | 88.2% |
| 3996138 | 2004.1.1.194 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_2 | 0.61 | 46.0 | 3.32e-01 | 100.0% | 26.1% |
| 3554575 | 2007.2.3.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › CDKN3 | 0.61 | 52.0 | 3.58e-01 | 100.0% | 35.1% |
| 3648785 | 301.1.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › Ribosomal_L7Ae | 0.60 | 46.0 | 4.16e-01 | 98.0% | 60.3% |
| 5069681 | 7574.1.1.4 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › POR_N | 0.57 | 46.0 | 3.10e-01 | 100.0% | 20.9% |
| 5083492 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.57 | 47.0 | 4.06e-01 | 98.0% | 80.0% |
| 4863425 | 7574.1.1.11 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › DXP_synthase_N | 0.55 | 39.0 | 4.05e-01 | 82.0% | 100.0% |
D2
medium
residues 51-114
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mqkA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.66 | 53.0 | 5.28e-01 | 89.1% | 100.0% |
| 2blkA00 | 3.40.50.11170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Uncharacterised protein PF08960, DUF1874 | 0.58 | 48.0 | 4.02e-01 | 93.8% | 80.3% |
| 3edpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 32.0 | 3.08e-01 | 82.8% | 44.7% |
| 1zbsA03 | 1.10.720.160 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.57 | 47.0 | 4.29e-01 | 95.3% | 75.3% |
| 2k8oA00 | 1.20.5.2120 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 38.0 | 3.86e-01 | 76.6% | 88.3% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.52 | 36.0 | 3.95e-01 | 95.3% | 100.0% |