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IMGVR_UViG_3300002485_000292-3300002485-C687J35088_1000115115

Arc-Vir

IMGVR_UViG_3300002485_000292-3300002485-C687J35088_1000115115

Identity

Kingdom:
archaea

Quality

84.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-59
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1twfI01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.64 37.0 3.79e-01 100.0% 56.5%
2hvwA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.57 46.0 3.46e-01 100.0% 71.4%
3cz8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.56 32.0 3.13e-01 100.0% 47.4%
2cg7A01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.52 36.0 3.69e-01 83.7% 82.6%
5uh5D02 1.10.132.30 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain 0.52 42.0 3.08e-01 93.9% 32.6%
1d7bA00 2.60.40.1210 Mainly Beta › Sandwich › Immunoglobulin-like › Cellobiose dehydrogenase, cytochrome domain 0.51 41.0 2.96e-01 100.0% 94.1%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3702861 375.1.1.19 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.69 41.0 3.94e-01 100.0% 50.9%
3561493 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.66 40.0 4.64e-01 95.9% 85.7%
3404585 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.65 40.0 4.06e-01 85.7% 62.0%
3547695 3470.1.1.0 ↗ extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain 0.62 36.0 4.13e-01 100.0% 90.0%
3612883 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.62 36.0 3.76e-01 91.8% 60.0%
3709555 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.61 37.0 3.60e-01 91.8% 50.9%
3882882 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.61 36.0 4.12e-01 95.9% 93.3%
3419779 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.60 36.0 3.98e-01 95.9% 93.3%
3482420 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 33.0 3.81e-01 100.0% 82.8%
3605636 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.59 42.0 4.06e-01 100.0% 67.3%
3715229 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.59 42.0 4.03e-01 100.0% 67.3%
3396514 386.1.1.259 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF29169 0.59 38.0 3.97e-01 85.7% 73.3%
3477576 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.58 34.0 3.59e-01 91.8% 60.0%
3416458 386.1.1.259 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF29169 0.58 37.0 3.86e-01 81.6% 71.1%
None — 0.58 37.0 3.69e-01 87.8% 60.4%
3597992 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.57 40.0 3.92e-01 100.0% 67.3%
3521135 376.1.3.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD 0.57 39.0 3.50e-01 83.7% 50.0%
3253246 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.57 33.0 3.64e-01 98.0% 83.3%
3935682 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.56 38.0 3.56e-01 71.4% 73.3%
3268247 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 45.0 2.74e-01 100.0% 44.8%