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IMGVR_UViG_3300002485_000458-3300002485-C687J35088_1000290618
Arc-VirIMGVR_UViG_3300002485_000458-3300002485-C687J35088_1000290618
Identity
- Kingdom:
- archaea
Quality
69.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-57_59-78
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ng0A01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.70 | 49.0 | 4.40e-01 | 73.3% | 82.5% |
| 5zliA01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.67 | 47.0 | 4.19e-01 | 73.3% | 80.2% |
| 4lniJ01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.67 | 47.0 | 4.25e-01 | 74.7% | 82.7% |
| 3ig3A02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 43.0 | 3.75e-01 | 74.7% | 90.2% |
| 4m8mA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 41.0 | 3.57e-01 | 73.3% | 81.5% |
| 1feuA01 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.59 | 48.0 | 4.60e-01 | 93.3% | 92.3% |
| 5dm6S01 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.59 | 48.0 | 4.69e-01 | 93.3% | 96.5% |
| 2zeqA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 41.0 | 4.08e-01 | 73.3% | 93.6% |
| 5v6rA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 41.0 | 3.63e-01 | 73.3% | 89.0% |
| 4cxjA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.57 | 40.0 | 3.38e-01 | 93.3% | 42.7% |
| 4m0wA01 | 3.10.20.540 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Papain-like viral protease, N-terminal domain | 0.57 | 39.0 | 4.36e-01 | 72.0% | 98.2% |
| 4p16A01 | 3.10.20.540 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Papain-like viral protease, N-terminal domain | 0.56 | 38.0 | 4.25e-01 | 72.0% | 98.2% |
| 4do8A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 38.0 | 4.01e-01 | 86.7% | 93.9% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4927129 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.68 | 48.0 | 4.42e-01 | 74.7% | 79.0% |
| 4995489 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 40.0 | 3.63e-01 | 72.0% | 95.2% |
| 4947237 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 40.0 | 3.78e-01 | 72.0% | 97.9% |
| 1108022 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.58 | 47.0 | 4.56e-01 | 94.7% | 95.5% |
| 4941937 | 221.1.1.50 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF4430 | 0.58 | 40.0 | 3.70e-01 | 72.0% | 98.9% |
| 4452640 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.57 | 47.0 | 4.47e-01 | 96.0% | 89.5% |
| 4026863 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.57 | 46.0 | 4.34e-01 | 93.3% | 95.8% |
| 3789145 | 316.1.1.14 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › LicD | 0.55 | 45.0 | 3.00e-01 | 96.0% | 51.6% |
| 4024438 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 46.0 | 3.97e-01 | 93.3% | 79.2% |
| 3999634 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.52 | 38.0 | 3.67e-01 | 77.3% | 96.5% |
| 3978755 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.51 | 35.0 | 2.52e-01 | 73.3% | 34.7% |
| 4484851 | 60.1.1.3 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Sld7_N | 0.50 | 38.0 | 2.97e-01 | 78.7% | 70.0% |
D2
high
residues 80-155