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IMGVR_UViG_3300002498_000270-3300002498-TOLCLC_100826449
Arc-VirIMGVR_UViG_3300002498_000270-3300002498-TOLCLC_100826449
Identity
- Kingdom:
- archaea
Quality
66.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-46
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6hoyA02 | 2.20.28.200 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.77 | 67.0 | 6.50e-01 | 100.0% | 93.9% |
| 6rxpA02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.75 | 62.0 | 4.85e-01 | 100.0% | 43.2% |
| 1ltlA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.75 | 59.0 | 5.70e-01 | 88.4% | 85.7% |
| 3p2aA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.74 | 54.0 | 5.82e-01 | 81.4% | 94.4% |
| 2b4yA02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.74 | 65.0 | 4.83e-01 | 100.0% | 58.3% |
| 1gaxA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.73 | 64.0 | 3.72e-01 | 97.7% | 12.1% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.73 | 63.0 | 5.97e-01 | 93.0% | 86.0% |
| 1m2gA02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.71 | 58.0 | 4.60e-01 | 100.0% | 44.1% |
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.71 | 58.0 | 5.72e-01 | 95.3% | 93.6% |
| 2k2dA00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.70 | 57.0 | 5.57e-01 | 97.7% | 85.1% |
| 4me3A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.69 | 53.0 | 4.99e-01 | 88.4% | 87.3% |
| 3u31A02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.67 | 58.0 | 4.47e-01 | 100.0% | 51.5% |
| 2zuoA08 | 2.30.30.620 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 45.0 | 4.12e-01 | 88.4% | 51.7% |
| 1yuzA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.65 | 48.0 | 4.97e-01 | 88.4% | 92.1% |
| 1ak2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 50.0 | 3.19e-01 | 97.7% | 18.2% |
| 1wevA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.62 | 43.0 | 3.86e-01 | 74.4% | 70.3% |
| 5i0fB04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 47.0 | 3.78e-01 | 95.3% | 42.9% |
| 1zakA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 44.0 | 2.84e-01 | 100.0% | 15.9% |
| 2f2hA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 41.0 | 4.01e-01 | 83.7% | 68.8% |
| 5jouA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 40.0 | 3.35e-01 | 83.7% | 41.8% |
| 2ckaA01 | 3.40.5.120 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.57 | 48.0 | 4.65e-01 | 97.7% | 91.8% |
| 4nu0A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 42.0 | 2.75e-01 | 100.0% | 17.0% |
| 2xy1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 3.62e-01 | 95.3% | 63.9% |
| 4ba0A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 39.0 | 3.75e-01 | 88.4% | 68.6% |
| 4avrA00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.54 | 39.0 | 3.23e-01 | 86.0% | 78.7% |
| 4fmrB01 | 2.70.50.70 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › | 0.54 | 44.0 | 3.12e-01 | 95.3% | 44.3% |
| 2h5eA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 42.0 | 3.00e-01 | 95.3% | 51.2% |
| 3okyB02 | 3.30.1680.10 | Alpha Beta › 2-Layer Sandwich › ligand-binding face of the semaphorins, domain 2 › ligand-binding face of the semaphorins, domain 2 | 0.53 | 36.0 | 3.52e-01 | 100.0% | 61.5% |
| 1jovA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 36.0 | 2.24e-01 | 72.1% | 42.4% |
| 1olzA02 | 3.30.1680.10 | Alpha Beta › 2-Layer Sandwich › ligand-binding face of the semaphorins, domain 2 › ligand-binding face of the semaphorins, domain 2 | 0.52 | 38.0 | 3.60e-01 | 100.0% | 64.9% |
| 3ucqA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 36.0 | 3.11e-01 | 90.7% | 43.0% |
| 3goxA03 | 3.40.1800.10 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases | 0.51 | 36.0 | 2.97e-01 | 72.1% | 56.8% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 41.0 | 3.75e-01 | 97.7% | 83.9% |
| 3ujzA03 | 2.60.20.40 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › | 0.50 | 42.0 | 3.32e-01 | 95.3% | 69.0% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4121492 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.84 | 65.0 | 3.78e-01 | 93.0% | 10.9% |
| 4015651 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.83 | 62.0 | 6.79e-01 | 86.0% | 97.1% |
| 5052663 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.83 | 69.0 | 7.08e-01 | 90.7% | 97.5% |
| 1246988 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 65.0 | 6.32e-01 | 90.7% | 97.9% |
| 4019144 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 61.0 | 6.03e-01 | 83.7% | 100.0% |
| 3325747 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 64.0 | 6.34e-01 | 90.7% | 100.0% |
| 4026442 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 60.0 | 6.01e-01 | 86.0% | 100.0% |
| 5019386 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 63.0 | 6.26e-01 | 88.4% | 82.2% |
| 3440046 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 61.0 | 6.25e-01 | 95.3% | 95.0% |
| 3414926 | 375.1.1.45 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Mcm10 | 0.76 | 56.0 | 6.00e-01 | 86.0% | 100.0% |
| 4163860 | 375.1.1.199 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MJ0401 | 0.76 | 62.0 | 6.12e-01 | 88.4% | 93.3% |
| 3933289 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 57.0 | 5.64e-01 | 88.4% | 80.0% |
| 3602534 | 375.1.1.199 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MJ0401 | 0.75 | 59.0 | 6.10e-01 | 86.0% | 95.0% |
| 3484040 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 65.0 | 5.52e-01 | 97.7% | 95.7% |
| 4154672 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.74 | 61.0 | 3.79e-01 | 100.0% | 16.2% |
| 4593708 | 7056.1.1.0 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan | 0.74 | 57.0 | 5.70e-01 | 88.4% | 82.2% |
| 1874307 | 375.1.1.65 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Thio2_N | 0.74 | 54.0 | 5.82e-01 | 81.4% | 94.4% |
| 3226989 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.73 | 56.0 | 5.24e-01 | 88.4% | 67.3% |
| 4161260 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.73 | 58.0 | 5.72e-01 | 90.7% | 84.4% |
| 119030 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 51.0 | 5.46e-01 | 90.7% | 100.0% |
| 4039609 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 65.0 | 5.62e-01 | 97.7% | 95.4% |
| 4190103 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.73 | 56.0 | 5.88e-01 | 88.4% | 97.4% |
| 4099915 | 375.1.1.128 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_SprT | 0.72 | 54.0 | 5.74e-01 | 83.7% | 100.0% |
| 4969277 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 57.0 | 5.86e-01 | 88.4% | 97.5% |
| 4610912 | 375.1.1.32 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › ADK_lid | 0.72 | 57.0 | 5.87e-01 | 95.3% | 92.5% |
| 4085524 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 53.0 | 5.69e-01 | 83.7% | 100.0% |
| 3942720 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.71 | 60.0 | 4.19e-01 | 95.3% | 81.4% |
| 3541580 | 375.1.1.78 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-3CxxC_2 | 0.70 | 53.0 | 4.62e-01 | 90.7% | 51.4% |
| 4176764 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.70 | 58.0 | 3.66e-01 | 100.0% | 18.6% |
| 3388528 | 7056.1.1.0 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan | 0.70 | 53.0 | 5.41e-01 | 90.7% | 95.0% |
| 3633209 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 59.0 | 5.37e-01 | 100.0% | 96.7% |
| 3630024 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.68 | 58.0 | 3.46e-01 | 100.0% | 18.4% |
| 3946860 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 50.0 | 4.98e-01 | 81.4% | 75.6% |
| 4971492 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.67 | 54.0 | 3.14e-01 | 90.7% | 9.3% |
| 4263080 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.67 | 56.0 | 3.53e-01 | 100.0% | 18.8% |
| 5064846 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.66 | 59.0 | 3.77e-01 | 100.0% | 22.7% |
| 4947644 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 53.0 | 4.77e-01 | 88.4% | 73.3% |
| 3176780 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.65 | 54.0 | 3.39e-01 | 100.0% | 18.2% |
| 4600977 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 53.0 | 3.41e-01 | 100.0% | 19.5% |
| 4176817 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.64 | 52.0 | 3.36e-01 | 100.0% | 19.2% |
| None | — | 0.64 | 44.0 | 2.97e-01 | 74.4% | 19.4% | |
| 4215687 | 375.1.1.32 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › ADK_lid | 0.63 | 53.0 | 5.27e-01 | 100.0% | 93.3% |
| 4539035 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.63 | 54.0 | 3.44e-01 | 100.0% | 20.5% |
| 3303251 | 375.1.1.32 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › ADK_lid | 0.63 | 54.0 | 5.22e-01 | 100.0% | 90.0% |
| 3620613 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 46.0 | 4.65e-01 | 90.7% | 91.1% |
| 3463682 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 51.0 | 4.00e-01 | 97.7% | 67.4% |
| 3614660 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.55 | 45.0 | 2.81e-01 | 100.0% | 15.2% |
| 4249669 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 40.0 | 3.19e-01 | 88.4% | 57.9% |