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IMGVR_UViG_3300002498_000340-3300002498-TOLCLC_1005461914
Arc-VirIMGVR_UViG_3300002498_000340-3300002498-TOLCLC_1005461914
Identity
- Kingdom:
- archaea
Quality
72.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 387-463
Domain cluster:
rep: IMGVR_UViG_3300002171_000033-3300002171-JGI24732J26686_100044418__D4-72
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bbyA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 58.0 | 6.05e-01 | 100.0% | 97.1% |
| 3dv8A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 59.0 | 5.88e-01 | 100.0% | 91.0% |
| 3b02A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 60.0 | 5.83e-01 | 100.0% | 88.2% |
| 1pp8O00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 58.0 | 5.36e-01 | 93.5% | 88.7% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 53.0 | 4.82e-01 | 100.0% | 63.5% |
| 1o3sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 55.0 | 5.80e-01 | 94.8% | 100.0% |
| 5hs7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 55.0 | 5.08e-01 | 100.0% | 72.4% |
| 3broD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 58.0 | 4.84e-01 | 100.0% | 65.7% |
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 52.0 | 4.93e-01 | 98.7% | 74.2% |
| 3cuqA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 50.0 | 5.00e-01 | 97.4% | 81.2% |
| 4g9yA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 56.0 | 4.71e-01 | 100.0% | 61.0% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 56.0 | 4.66e-01 | 100.0% | 62.4% |
| 5e1wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 56.0 | 4.36e-01 | 100.0% | 50.0% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 54.0 | 4.97e-01 | 100.0% | 74.3% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 51.0 | 4.72e-01 | 100.0% | 71.3% |
| 3cdhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 54.0 | 4.48e-01 | 98.7% | 55.2% |
| 3zcoA00 | 1.10.10.2450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 54.0 | 4.65e-01 | 100.0% | 85.0% |
| 5eriA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 54.0 | 4.38e-01 | 100.0% | 54.2% |
| 3nqoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 53.0 | 4.16e-01 | 100.0% | 48.0% |
| 1jg5A00 | 3.30.1410.10 | Alpha Beta › 2-Layer Sandwich › Gtp Cyclohydrolase I Feedback Regulatory Protein; Chain: K › GTP cyclohydrolase I feedback regulatory protein GFRP | 0.61 | 42.0 | 4.18e-01 | 93.5% | 67.5% |
| 1yyvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 52.0 | 4.62e-01 | 100.0% | 67.0% |
| 3l4gC03 | 1.10.10.2330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.60 | 40.0 | 4.51e-01 | 87.0% | 100.0% |
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.60 | 53.0 | 5.28e-01 | 100.0% | 98.8% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 52.0 | 4.68e-01 | 100.0% | 69.6% |
| 1kyzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 51.0 | 4.68e-01 | 96.1% | 75.7% |
| 3jamK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 53.0 | 4.95e-01 | 100.0% | 87.5% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 51.0 | 4.73e-01 | 100.0% | 78.6% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.59 | 50.0 | 4.55e-01 | 98.7% | 76.6% |
| 2a5yC03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 46.0 | 4.15e-01 | 100.0% | 61.3% |
| 2lsoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 48.0 | 4.76e-01 | 94.8% | 94.0% |
| 2hqyA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 42.0 | 3.58e-01 | 93.5% | 46.2% |
| 3ajdA01 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.57 | 36.0 | 3.95e-01 | 74.0% | 81.7% |
| 1whrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.57 | 45.0 | 3.88e-01 | 100.0% | 54.0% |
| 2e29A01 | 3.30.70.2280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 35.0 | 3.58e-01 | 77.9% | 61.8% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.56 | 44.0 | 4.65e-01 | 89.6% | 97.0% |
| 2b0lC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 48.0 | 4.59e-01 | 100.0% | 83.0% |
| 3s93A00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.56 | 45.0 | 4.46e-01 | 90.9% | 92.5% |
| 2ex5A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.56 | 48.0 | 3.60e-01 | 100.0% | 50.7% |
| 3g87A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.56 | 33.0 | 3.46e-01 | 81.8% | 65.7% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 43.0 | 4.02e-01 | 85.7% | 78.4% |
| 7npaA02 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 42.0 | 4.10e-01 | 85.7% | 76.5% |
| 1mw7A03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.54 | 37.0 | 3.73e-01 | 70.1% | 78.7% |
| 4nxyA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 45.0 | 3.44e-01 | 92.2% | 93.8% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 45.0 | 4.39e-01 | 100.0% | 89.9% |
| 6wqbA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 43.0 | 3.49e-01 | 98.7% | 45.9% |
| 6vudA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.53 | 40.0 | 4.05e-01 | 90.9% | 84.0% |
| 5i2cB01 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.53 | 42.0 | 3.47e-01 | 88.3% | 93.2% |
| 1kafA00 | 3.90.1150.20 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain | 0.53 | 43.0 | 3.85e-01 | 89.6% | 75.9% |
| 4g6tA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 39.0 | 3.40e-01 | 81.8% | 63.3% |
| 2lh9A00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.53 | 44.0 | 4.45e-01 | 98.7% | 97.4% |
| 3pieA02 | 3.30.1370.250 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.52 | 45.0 | 4.18e-01 | 100.0% | 90.0% |
| 2lu2A00 | 3.30.70.2380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 36.0 | 3.62e-01 | 79.2% | 70.4% |
| 3eo4D00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 43.0 | 3.40e-01 | 92.2% | 93.2% |
| 1zvpD00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.51 | 43.0 | 3.69e-01 | 97.4% | 86.3% |
| 2e9hA01 | 3.30.30.170 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.51 | 42.0 | 3.82e-01 | 98.7% | 71.7% |
| 1qviA01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.51 | 42.0 | 3.78e-01 | 100.0% | 64.3% |
| 1jg8A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 39.0 | 3.69e-01 | 87.0% | 68.8% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3625797 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 55.0 | 5.46e-01 | 80.5% | 72.5% |
| 2646 | 101.1.2.35 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIF_beta | 0.73 | 58.0 | 6.05e-01 | 100.0% | 97.1% |
| 4020275 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 51.0 | 5.55e-01 | 93.5% | 100.0% |
| 3577927 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.69 | 60.0 | 4.00e-01 | 94.8% | 25.8% |
| 224405 | 101.1.2.142 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 | 0.68 | 60.0 | 5.87e-01 | 100.0% | 91.5% |
| 5053351 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 59.0 | 5.52e-01 | 100.0% | 90.5% |
| 5036720 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.66 | 55.0 | 5.38e-01 | 100.0% | 84.5% |
| 4971049 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.66 | 52.0 | 5.20e-01 | 100.0% | 85.0% |
| 4994983 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 51.0 | 5.30e-01 | 100.0% | 97.1% |
| 3381258 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.64 | 55.0 | 4.29e-01 | 100.0% | 42.2% |
| 3739375 | 101.1.2.24 ↗ | alpha arrays › HTH › HTH › winged helix domain › MAGE | 0.64 | 55.0 | 4.78e-01 | 100.0% | 68.0% |
| 4968723 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 53.0 | 4.61e-01 | 100.0% | 60.0% |
| 3420416 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.64 | 55.0 | 4.70e-01 | 100.0% | 59.2% |
| 3293830 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.63 | 55.0 | 3.63e-01 | 100.0% | 23.3% |
| 3262891 | 101.1.2.79 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_I_A49 | 0.63 | 48.0 | 5.06e-01 | 93.5% | 100.0% |
| 3319155 | 101.1.4.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC | 0.63 | 54.0 | 3.76e-01 | 100.0% | 32.5% |
| 5071343 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 54.0 | 5.12e-01 | 100.0% | 84.2% |
| 4002244 | 101.1.2.45 ↗ | alpha arrays › HTH › HTH › winged helix domain › SAC3_GANP | 0.62 | 55.0 | 4.00e-01 | 100.0% | 61.4% |
| 3604362 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.62 | 48.0 | 4.90e-01 | 94.8% | 86.7% |
| 4955393 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 46.0 | 5.04e-01 | 93.5% | 100.0% |
| 5064533 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 46.0 | 4.79e-01 | 96.1% | 87.1% |
| 4188749 | 101.1.2.20 ↗ | alpha arrays › HTH › HTH › winged helix domain › Arg_repressor | 0.62 | 52.0 | 5.20e-01 | 100.0% | 91.3% |
| 3441807 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.62 | 54.0 | 5.30e-01 | 100.0% | 96.5% |
| 3322650 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.62 | 45.0 | 4.72e-01 | 77.9% | 87.1% |
| 3573598 | 101.1.2.154 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1_C | 0.62 | 54.0 | 4.84e-01 | 100.0% | 70.9% |
| 3604748 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 53.0 | 3.93e-01 | 100.0% | 35.8% |
| 5075143 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.61 | 51.0 | 3.79e-01 | 100.0% | 35.1% |
| 3831895 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.61 | 54.0 | 3.72e-01 | 100.0% | 33.5% |
| 4951141 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 52.0 | 5.17e-01 | 97.4% | 96.2% |
| 4992272 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 53.0 | 4.63e-01 | 100.0% | 72.5% |
| 2388794 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.60 | 46.0 | 3.94e-01 | 100.0% | 48.5% |
| 4021510 | 320.4.1.0 ↗ | a+b two layers › R3H domain-like › PUB domain › PUB domain | 0.60 | 54.0 | 4.40e-01 | 98.7% | 87.1% |
| 3704775 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 52.0 | 4.68e-01 | 100.0% | 72.7% |
| 3184697 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 50.0 | 5.10e-01 | 98.7% | 100.0% |
| 3773056 | 101.1.2.512 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25877 | 0.60 | 48.0 | 5.00e-01 | 89.6% | 100.0% |
| 3651024 | 101.1.2.65 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 | 0.59 | 52.0 | 4.64e-01 | 100.0% | 73.6% |
| 3881617 | 101.1.2.161 ↗ | alpha arrays › HTH › HTH › winged helix domain › NOD2_WH | 0.59 | 44.0 | 4.46e-01 | 89.6% | 84.0% |
| 3821131 | 101.1.2.65 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 | 0.59 | 51.0 | 5.05e-01 | 100.0% | 98.8% |
| 4030596 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 49.0 | 4.76e-01 | 93.5% | 88.2% |
| 3724974 | 101.1.2.519 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7791 | 0.58 | 50.0 | 3.90e-01 | 100.0% | 53.9% |
| 5010374 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 49.0 | 4.61e-01 | 96.1% | 85.3% |
| 4659379 | 101.1.2.39 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA | 0.58 | 46.0 | 4.76e-01 | 93.5% | 98.6% |
| 4457666 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.58 | 37.0 | 3.66e-01 | 70.1% | 61.3% |
| 5002190 | 304.7.1.21 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › PF30773 | 0.58 | 37.0 | 3.85e-01 | 77.9% | 71.4% |
| 4575751 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.57 | 48.0 | 4.63e-01 | 96.1% | 85.6% |
| 4993809 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.57 | 49.0 | 4.58e-01 | 100.0% | 77.0% |
| 3612240 | 320.4.1.3 ↗ | a+b two layers › R3H domain-like › PUB domain › PUB domain › PUB | 0.57 | 50.0 | 4.07e-01 | 98.7% | 69.0% |
| 5077595 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 49.0 | 4.43e-01 | 100.0% | 74.5% |
| 4962526 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.56 | 47.0 | 3.85e-01 | 100.0% | 61.2% |
| 4073616 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.56 | 33.0 | 3.60e-01 | 72.7% | 69.2% |
| 3319253 | 101.1.2.137 ↗ | alpha arrays › HTH › HTH › winged helix domain › OST-HTH | 0.56 | 44.0 | 4.30e-01 | 90.9% | 86.7% |
| 3597966 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 48.0 | 4.53e-01 | 98.7% | 87.4% |
| 4566109 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 48.0 | 4.51e-01 | 100.0% | 80.0% |
| 5062574 | 328.12.1.0 ↗ | a+b two layers › IF3-like › IF3-like domain in Nudix hydrolase › IF3-like domain in Nudix hydrolase | 0.55 | 44.0 | 4.16e-01 | 92.2% | 70.5% |
| 3921187 | 320.4.1.7 ↗ | a+b two layers › R3H domain-like › PUB domain › PUB domain › PF26117 | 0.55 | 47.0 | 3.46e-01 | 98.7% | 35.5% |
| 5069078 | 304.7.1.21 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › PF30773 | 0.55 | 41.0 | 3.91e-01 | 84.4% | 68.9% |
| 5072937 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.53 | 45.0 | 3.48e-01 | 92.2% | 95.3% |
| 3635092 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.53 | 42.0 | 4.06e-01 | 89.6% | 75.6% |
| 4953289 | 304.11.1.5 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › DUF2102 | 0.53 | 37.0 | 3.21e-01 | 72.7% | 49.2% |
| 4997780 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.53 | 44.0 | 4.45e-01 | 100.0% | 97.5% |
| 4012791 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.53 | 35.0 | 3.54e-01 | 70.1% | 82.5% |
| 4021026 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.52 | 35.0 | 3.38e-01 | 70.1% | 74.4% |
| 4512240 | 304.1.1.0 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain | 0.51 | 35.0 | 3.07e-01 | 70.1% | 93.0% |
| 3167249 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 44.0 | 4.04e-01 | 100.0% | 95.2% |
| 4988628 | 328.5.1.6 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › DUF2249 | 0.51 | 34.0 | 3.58e-01 | 87.0% | 80.0% |
| 5068941 | 304.7.1.21 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › PF30773 | 0.51 | 39.0 | 3.83e-01 | 84.4% | 77.6% |
| 4131976 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.50 | 43.0 | 3.53e-01 | 100.0% | 50.0% |
| 3314359 | 320.1.1.11 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › PF27261 | 0.50 | 35.0 | 3.61e-01 | 88.3% | 76.0% |
D2
medium
residues 109-181
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rlfF01 | 1.20.58.370 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › MalF N-terminal region-like | 0.68 | 49.0 | 4.73e-01 | 80.8% | 66.3% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.62 | 48.0 | 4.97e-01 | 83.6% | 88.2% |
| 2g0dA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.61 | 43.0 | 2.66e-01 | 72.6% | 83.7% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 44.0 | 4.46e-01 | 76.7% | 90.1% |
| 4xpwA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.60 | 40.0 | 3.41e-01 | 71.2% | 39.7% |
| 2z1qB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.57 | 48.0 | 3.99e-01 | 95.9% | 93.4% |
| 2gtaA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.56 | 41.0 | 3.76e-01 | 79.5% | 57.7% |
ECOD (1)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4933204 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.68 | 53.0 | 4.71e-01 | 87.7% | 57.3% |
D3
medium
residues 197-287
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mzbA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 41.0 | 4.34e-01 | 79.1% | 65.9% |
| 4hqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 48.0 | 4.60e-01 | 92.3% | 73.3% |
| 4i98C01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 37.0 | 3.99e-01 | 76.9% | 76.0% |
| 2v1xA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 42.0 | 3.97e-01 | 89.0% | 76.4% |
| 2ia0B02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.52 | 33.0 | 3.26e-01 | 80.2% | 59.6% |
| 2k4mA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 35.0 | 3.00e-01 | 70.3% | 79.1% |
| 4af3A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 36.0 | 3.72e-01 | 78.0% | 77.3% |
| 2ch0A01 | 1.10.10.1180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAN1, winged-helix domain | 0.51 | 34.0 | 3.33e-01 | 72.5% | 61.2% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 35.0 | 3.49e-01 | 86.8% | 67.3% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5032570 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 41.0 | 4.13e-01 | 76.9% | 62.1% |
| 4956137 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 42.0 | 4.22e-01 | 81.3% | 65.6% |
| 4933483 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 39.0 | 4.05e-01 | 71.4% | 64.7% |
| 3666427 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.64 | 47.0 | 3.98e-01 | 86.8% | 45.8% |
| 4037999 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.62 | 45.0 | 4.49e-01 | 89.0% | 73.7% |
| 4984969 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 43.0 | 3.24e-01 | 84.6% | 29.5% |
| 3501333 | 101.1.2.12 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEP | 0.56 | 48.0 | 4.47e-01 | 96.7% | 84.3% |
| 5062643 | 101.1.2.138 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF3860 | 0.55 | 39.0 | 4.12e-01 | 75.8% | 83.7% |
| 4292464 | 327.19.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C | 0.54 | 33.0 | 3.45e-01 | 82.4% | 66.3% |
| 5007153 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.54 | 44.0 | 4.01e-01 | 89.0% | 71.7% |
| 4004166 | 108.1.1.45 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › PLCB1-4-like_EFh | 0.53 | 39.0 | 3.92e-01 | 86.8% | 77.8% |
| 1299892 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.53 | 38.0 | 3.58e-01 | 85.7% | 61.4% |
| 5035757 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.52 | 35.0 | 3.35e-01 | 81.3% | 59.0% |
| 4461976 | 2003.1.2.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 | 0.52 | 41.0 | 2.82e-01 | 86.8% | 31.0% |
| 4554410 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 41.0 | 2.62e-01 | 89.0% | 30.5% |