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IMGVR_UViG_3300002561_000005-3300002561-JGI25384J37096_1000138312

Arc-Vir

IMGVR_UViG_3300002561_000005-3300002561-JGI25384J37096_1000138312

Quality

91.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-138
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3oziB00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.58 42.0 3.98e-01 100.0% 60.7%
3pvlA03 1.20.80.10 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.53 33.0 3.55e-01 97.0% 71.2%
6mcjA00 1.10.2090.10 Mainly Alpha › Orthogonal Bundle › orange carotenoid protein, domain 2 › Orange carotenoid-binding protein, N-terminal domain 0.50 30.0 2.99e-01 95.5% 53.8%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5009824 2006.1.4.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN 0.68 52.0 5.21e-01 100.0% 79.1%
5014610 2006.1.4.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN 0.67 51.0 5.17e-01 100.0% 79.7%
4105792 2004.1.1.79 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin 0.53 39.0 3.37e-01 76.1% 99.0%
5008182 2006.1.4.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN 0.53 46.0 4.48e-01 100.0% 88.3%
3260070 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.52 42.0 3.73e-01 100.0% 60.0%