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IMGVR_UViG_3300002596_000009-3300002596-draft_14181075
Arc-VirIMGVR_UViG_3300002596_000009-3300002596-draft_14181075
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 47-115
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rzmA01 | 3.30.70.1140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 | 0.65 | 36.0 | 3.46e-01 | 75.4% | 45.0% |
| 2pndA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 36.0 | 3.09e-01 | 92.8% | 36.1% |
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.58 | 42.0 | 3.99e-01 | 79.7% | 93.0% |
| 4mbsA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 44.0 | 2.87e-01 | 87.0% | 24.0% |
| 6yiiA01 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.56 | 49.0 | 3.42e-01 | 98.6% | 52.1% |
| 2jllA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 32.0 | 2.96e-01 | 85.5% | 40.0% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 40.0 | 3.58e-01 | 84.1% | 71.7% |
| 1mhyD00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.53 | 45.0 | 2.79e-01 | 100.0% | 46.9% |
| 3nwnA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.52 | 43.0 | 2.89e-01 | 97.1% | 41.6% |
| 3wxyA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 36.0 | 2.79e-01 | 78.3% | 33.1% |
| 3oduB01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 45.0 | 3.02e-01 | 100.0% | 50.5% |
| 3u1nB01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.50 | 39.0 | 2.67e-01 | 92.8% | 96.3% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4978506 | 3714.1.1.0 ↗ | a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain | 0.65 | 52.0 | 3.83e-01 | 89.9% | 32.1% |
| 4952130 | 3714.1.1.1 ↗ | a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › LonC_helical | 0.63 | 50.0 | 3.50e-01 | 89.9% | 26.5% |
| 4938599 | 205.1.1.15 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_6 | 0.56 | 33.0 | 3.32e-01 | 73.9% | 55.1% |
| 3179274 | 210.2.1.3 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C_2 | 0.56 | 45.0 | 2.92e-01 | 92.8% | 45.2% |
| 3975869 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.56 | 34.0 | 3.13e-01 | 88.4% | 42.0% |
| 3912893 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.55 | 42.0 | 2.75e-01 | 87.0% | 23.6% |
| 3878697 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.55 | 40.0 | 2.74e-01 | 82.6% | 51.0% |
| 3285369 | 109.4.1.2998 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF25872 | 0.55 | 45.0 | 2.83e-01 | 98.6% | 52.7% |
| 3581883 | 5048.1.1.0 ↗ | alpha complex topology › Aquaporin-like › Aquaporin-like › Aquaporin-like | 0.54 | 42.0 | 3.23e-01 | 88.4% | 97.2% |
| 3524884 | 304.8.1.11 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Castor1_N | 0.54 | 27.0 | 3.06e-01 | 78.3% | 60.0% |
| 3996291 | 4351.1.1.1 ↗ | alpha arrays › ATP12-like › ATP12-like › ATP12-like › ATP12 | 0.54 | 45.0 | 3.22e-01 | 95.7% | 37.7% |
| 3634661 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.53 | 40.0 | 3.77e-01 | 82.6% | 71.8% |
| 3566423 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 41.0 | 3.00e-01 | 88.4% | 39.5% |
| 4977171 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.53 | 34.0 | 3.70e-01 | 81.2% | 83.3% |
| 5018003 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.53 | 39.0 | 2.59e-01 | 81.2% | 72.8% |
| 3214395 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.52 | 44.0 | 2.93e-01 | 95.7% | 44.3% |
| 3247408 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.51 | 39.0 | 2.44e-01 | 85.5% | 24.8% |
| 3598536 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 39.0 | 2.32e-01 | 94.2% | 9.4% |
| 5079074 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 42.0 | 3.69e-01 | 97.1% | 70.9% |