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IMGVR_UViG_3300002703_000407-3300002703-draft_110753881

Arc-Vir

IMGVR_UViG_3300002703_000407-3300002703-draft_110753881

Quality

87.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 40-152
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02747.21 best PCNA_C 27.6 4.00e-06 100.0% 87.5%
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.90 82.0 6.18e-01 100.0% 44.1%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.89 85.0 6.40e-01 100.0% 47.1%
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.89 83.0 6.23e-01 100.0% 45.1%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.88 83.0 6.20e-01 100.0% 45.9%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.87 83.0 6.24e-01 100.0% 46.7%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.87 81.0 5.92e-01 100.0% 41.3%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.86 78.0 6.06e-01 99.1% 48.4%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.86 82.0 6.10e-01 100.0% 45.0%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.86 80.0 6.04e-01 100.0% 45.3%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.85 81.0 5.99e-01 100.0% 45.0%
1sxjH02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.85 81.0 7.70e-01 100.0% 90.6%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.85 76.0 6.18e-01 100.0% 54.9%
4trtA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.84 78.0 7.64e-01 100.0% 91.7%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.83 78.0 5.86e-01 100.0% 46.3%
1vpkA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.83 75.0 7.35e-01 100.0% 89.2%
4trtA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.82 74.0 7.17e-01 100.0% 86.9%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.82 76.0 6.16e-01 100.0% 55.8%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.81 76.0 7.35e-01 99.1% 91.9%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.81 72.0 7.30e-01 99.1% 93.8%
5agvA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 76.0 7.15e-01 100.0% 89.3%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 71.0 6.85e-01 100.0% 85.5%
3pweA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 71.0 6.95e-01 100.0% 87.8%
6ap4B02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 74.0 6.82e-01 100.0% 85.8%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.79 73.0 6.24e-01 100.0% 74.3%
6ptrB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 69.0 6.98e-01 99.1% 93.8%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.78 73.0 5.50e-01 100.0% 45.0%
1vpkA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 71.0 6.76e-01 100.0% 85.2%
5aguA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 72.0 6.98e-01 100.0% 90.5%
4rkiA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 70.0 6.68e-01 100.0% 88.5%
4trtA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.75 65.0 6.39e-01 100.0% 87.4%
5wceA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.74 68.0 6.51e-01 100.0% 89.1%
4rzkA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 40.0 4.48e-01 85.8% 86.2%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 28.0 3.63e-01 100.0% 98.2%
3cwvA01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.50 40.0 3.31e-01 84.1% 88.4%
2knqA01 3.55.40.10 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › minor pseudopilin epsh domain 0.50 44.0 4.21e-01 98.2% 87.9%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4939066 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.92 88.0 8.37e-01 100.0% 88.4%
5039027 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.91 85.0 8.37e-01 100.0% 91.7%
4936050 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.91 88.0 8.46e-01 100.0% 90.4%
4372908 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.91 83.0 8.00e-01 100.0% 85.6%
5056758 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.91 84.0 8.34e-01 100.0% 93.9%
5027067 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.91 87.0 8.53e-01 100.0% 95.0%
5037345 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 87.0 8.13e-01 100.0% 88.0%
4646871 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 87.0 8.34e-01 100.0% 89.6%
5033948 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 85.0 8.07e-01 100.0% 85.4%
4232371 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.90 86.0 8.45e-01 100.0% 93.3%
143428 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 82.0 8.07e-01 100.0% 90.0%
5011281 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 85.0 8.16e-01 100.0% 88.8%
4660283 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 87.0 8.34e-01 100.0% 91.2%
4934002 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 86.0 8.10e-01 100.0% 86.2%
5043507 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 87.0 8.48e-01 100.0% 95.0%
5028024 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 85.0 8.05e-01 100.0% 86.2%
5052551 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 84.0 8.06e-01 100.0% 88.8%
5991 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 83.0 8.10e-01 100.0% 90.2%
4991675 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 86.0 8.25e-01 100.0% 90.4%
4983064 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 86.0 8.27e-01 100.0% 91.1%
4456195 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.89 84.0 8.19e-01 100.0% 92.5%
4948360 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 84.0 7.93e-01 100.0% 86.0%
5029787 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 82.0 8.01e-01 100.0% 90.8%
4995028 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 86.0 8.21e-01 100.0% 92.8%
5074321 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.89 81.0 7.85e-01 100.0% 87.2%
4941929 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 84.0 8.01e-01 100.0% 87.5%
4055466 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 85.0 8.17e-01 100.0% 91.1%
5000468 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 84.0 8.12e-01 100.0% 92.8%
4992059 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 85.0 8.20e-01 100.0% 91.9%
4998585 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 81.0 7.95e-01 100.0% 90.8%
5051689 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 84.0 8.10e-01 100.0% 90.4%
2392242 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.88 74.0 7.43e-01 100.0% 87.6%
2588759 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 84.0 8.15e-01 100.0% 92.6%
167574 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 82.0 7.78e-01 100.0% 84.7%
4976500 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 83.0 7.92e-01 100.0% 87.5%
5060716 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.87 84.0 7.92e-01 100.0% 90.0%
3725759 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.87 82.0 7.06e-01 100.0% 91.7%
4212381 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 84.0 7.78e-01 100.0% 85.2%
2392831 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 84.0 8.00e-01 100.0% 89.0%
3406312 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.87 83.0 8.04e-01 100.0% 92.7%
4956740 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 84.0 8.05e-01 100.0% 91.2%
309454 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.87 82.0 7.75e-01 100.0% 84.8%
3596476 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.87 83.0 7.54e-01 100.0% 93.0%
3244229 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.87 82.0 7.93e-01 100.0% 92.8%
4517015 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 82.0 7.92e-01 100.0% 90.3%
3558235 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.87 82.0 7.67e-01 100.0% 89.6%
5010672 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.87 82.0 8.07e-01 100.0% 93.3%
4030418 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 83.0 7.62e-01 100.0% 90.0%
3782606 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.87 82.0 7.44e-01 100.0% 84.8%
4943405 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.86 83.0 7.97e-01 100.0% 91.2%
1290662 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.86 82.0 7.50e-01 100.0% 81.8%
3397928 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.86 82.0 7.91e-01 100.0% 94.4%
3625037 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.86 81.0 7.60e-01 100.0% 91.9%
4026069 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.86 82.0 7.66e-01 100.0% 87.4%
4426056 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.86 81.0 7.18e-01 100.0% 81.3%
4013292 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.86 82.0 7.62e-01 100.0% 88.9%
3738030 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.86 82.0 7.61e-01 100.0% 88.1%
138072 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.86 82.0 7.73e-01 100.0% 88.5%
4929645 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.86 82.0 7.87e-01 100.0% 90.4%
3292092 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.86 82.0 7.65e-01 100.0% 89.6%
3743106 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.86 80.0 7.32e-01 100.0% 91.7%
5037314 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.86 81.0 7.93e-01 100.0% 93.3%
3734891 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.86 81.0 7.23e-01 100.0% 91.3%
2805173 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.85 80.0 7.69e-01 100.0% 88.8%
3789625 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.85 80.0 7.52e-01 100.0% 91.9%
3624708 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.85 81.0 7.52e-01 100.0% 85.9%
4025727 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.85 80.0 7.40e-01 100.0% 87.1%
3997015 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.85 80.0 7.61e-01 100.0% 89.2%
3804177 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.85 80.0 7.26e-01 100.0% 93.8%
3551142 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.84 80.0 7.23e-01 100.0% 81.4%
3251867 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.84 79.0 7.53e-01 100.0% 89.2%
3499821 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.84 79.0 7.53e-01 100.0% 90.0%
3256386 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.84 79.0 7.42e-01 100.0% 88.9%
5023031 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 79.0 7.62e-01 100.0% 90.4%
4956739 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 78.0 7.49e-01 100.0% 88.8%
3719938 227.1.1.17 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_N 0.84 79.0 7.26e-01 100.0% 88.6%
3936915 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.84 78.0 7.45e-01 100.0% 90.8%
3407530 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.83 78.0 7.34e-01 100.0% 88.1%
3936914 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.83 78.0 7.43e-01 100.0% 89.2%
3256904 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.83 78.0 7.52e-01 100.0% 93.6%
3251045 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 77.0 6.88e-01 100.0% 74.7%
162047 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 76.0 7.28e-01 100.0% 87.4%
4096140 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 77.0 7.45e-01 100.0% 90.4%
3436491 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.82 77.0 6.74e-01 100.0% 89.4%
4142781 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 76.0 7.30e-01 100.0% 88.8%
4939065 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 73.0 7.15e-01 100.0% 89.2%
5027066 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 74.0 7.18e-01 100.0% 88.0%
3932751 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.81 76.0 7.24e-01 100.0% 90.0%
3507499 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.81 76.0 7.15e-01 100.0% 93.3%
4059128 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 71.0 6.99e-01 100.0% 89.2%
3351110 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 75.0 7.32e-01 100.0% 96.7%
3168711 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 73.0 6.40e-01 100.0% 92.7%
3598260 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 73.0 7.08e-01 99.1% 96.0%
3932752 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.77 71.0 6.90e-01 100.0% 90.4%
1924009 227.1.1.10 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Herpes_PAP 0.69 62.0 5.90e-01 100.0% 88.0%