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IMGVR_UViG_3300002821_000004-3300002821-Iso3TCLC_1000013829
Arc-VirIMGVR_UViG_3300002821_000004-3300002821-Iso3TCLC_1000013829
Identity
- Kingdom:
- archaea
Quality
69.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 49-127_352-404
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 38.0 | 4.24e-01 | 87.9% | 76.7% |
| 1lxnA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 33.0 | 3.72e-01 | 88.6% | 81.6% |
| 4mt1A06 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.52 | 38.0 | 4.21e-01 | 84.1% | 100.0% |
| 7z79A01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.50 | 31.0 | 3.19e-01 | 85.6% | 62.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004294 | 4038.1.1.0 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein | 0.72 | 67.0 | 5.23e-01 | 100.0% | 88.1% |
| 3604407 | 4038.1.1.0 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein | 0.62 | 56.0 | 4.49e-01 | 99.2% | 85.8% |
| 3989466 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.53 | 46.0 | 2.97e-01 | 95.5% | 56.9% |
| 3959605 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.51 | 39.0 | 4.07e-01 | 90.2% | 86.4% |
D2
medium
residues 128-223
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 30.0 | 3.67e-01 | 91.7% | 78.2% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.60 | 30.0 | 3.68e-01 | 100.0% | 77.6% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 29.0 | 3.67e-01 | 91.7% | 82.1% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 29.0 | 3.31e-01 | 89.6% | 63.4% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.53 | 29.0 | 3.43e-01 | 91.7% | 77.8% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 31.0 | 3.60e-01 | 91.7% | 83.8% |
| 1vq8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 28.0 | 3.05e-01 | 83.3% | 62.8% |
| 2uurA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 36.0 | 2.79e-01 | 71.9% | 63.3% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 30.0 | 3.37e-01 | 92.7% | 77.1% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 28.0 | 2.92e-01 | 76.0% | 57.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034031 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.80 | 48.0 | 5.71e-01 | 96.9% | 89.2% |
| 3687350 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 34.0 | 4.28e-01 | 93.8% | 87.3% |
| 4502878 | 325.1.7.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C | 0.61 | 31.0 | 3.79e-01 | 91.7% | 76.7% |
| 4625348 | 325.1.7.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C | 0.59 | 30.0 | 3.69e-01 | 100.0% | 78.3% |
| 5686 | 211.1.1.18 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Diox-like_N | 0.55 | 31.0 | 3.29e-01 | 78.1% | 61.9% |
| 4461475 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 29.0 | 3.30e-01 | 84.4% | 68.6% |
| 4931657 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.54 | 28.0 | 3.10e-01 | 85.4% | 60.0% |
| 3554995 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.52 | 28.0 | 3.15e-01 | 91.7% | 67.1% |