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IMGVR_UViG_3300002821_000197-3300002821-Iso3TCLC_100522432

Arc-Vir

IMGVR_UViG_3300002821_000197-3300002821-Iso3TCLC_100522432

Quality

81.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-115
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03692.21 best CxxCxxCC 29.5 1.40e-06 82.1% 84.7%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4nwbA02 3.90.105.20 Alpha Beta › Alpha-Beta Complex › Molybdopterin biosynthesis moea protein, domain 2 › Ribosomal protein L10, N-terminal fragment, domain II 0.51 37.0 4.09e-01 83.0% 98.8%
3ca8A01 1.10.3620.10 Mainly Alpha › Orthogonal Bundle › YdcF fold › YdcF like domain 0.51 35.0 3.57e-01 70.5% 99.1%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5057748 3310.1.1.1 a+b two layers › Insertion domain in 60S ribosomal protein rpP0 (L10P) › Insertion domain in 60S ribosomal protein rpP0 (L10P) › Insertion domain in 60S ribosomal protein rpP0 (L10P) › RL10P_insert 0.59 39.0 4.45e-01 85.7% 95.0%
4210423 313.1.1.1 a+b complex topology › Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain › Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain › Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain › MurB_C 0.55 41.0 3.71e-01 80.4% 71.2%
3514087 3310.1.1.1 a+b two layers › Insertion domain in 60S ribosomal protein rpP0 (L10P) › Insertion domain in 60S ribosomal protein rpP0 (L10P) › Insertion domain in 60S ribosomal protein rpP0 (L10P) › RL10P_insert 0.51 38.0 4.16e-01 86.6% 100.0%