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IMGVR_UViG_3300002966_000074-3300002966-JGI24721J44947_1000350514
Arc-VirIMGVR_UViG_3300002966_000074-3300002966-JGI24721J44947_1000350514
Identity
- Kingdom:
- archaea
Quality
66.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-79
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4he6A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 49.0 | 4.39e-01 | 90.9% | 88.8% |
| 2hc8A00 | 2.70.150.10 | Mainly Beta › Distorted Sandwich › Calcium-transporting ATPase, cytoplasmic transduction domain A › Calcium-transporting ATPase, cytoplasmic transduction domain A | 0.58 | 40.0 | 3.40e-01 | 95.5% | 42.5% |
| 3ebrA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 48.0 | 3.79e-01 | 100.0% | 77.6% |
| 2vd5B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 37.0 | 2.77e-01 | 72.7% | 66.3% |
| 5by5A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 45.0 | 3.89e-01 | 98.5% | 86.1% |
| 1tulA00 | 2.70.40.20 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Baculovirus telokin-like protein 20 | 0.54 | 42.0 | 3.66e-01 | 84.8% | 94.1% |
| 4ii1A01 | 2.30.30.1190 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 48.0 | 4.51e-01 | 100.0% | 87.5% |
| 1t9hA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 37.0 | 3.64e-01 | 75.8% | 84.9% |
| 4oifA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.50 | 37.0 | 3.86e-01 | 83.3% | 95.2% |
| 3fjsC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 38.0 | 3.30e-01 | 83.3% | 79.4% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3896872 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.63 | 47.0 | 4.65e-01 | 78.8% | 78.6% |
| 3958285 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.60 | 48.0 | 3.76e-01 | 90.9% | 89.3% |
| 3727262 | 12.6.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Bac_rhamnosid_C | 0.57 | 46.0 | 4.37e-01 | 92.4% | 83.7% |
| 3585016 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.56 | 43.0 | 4.56e-01 | 97.0% | 91.7% |
| 3978784 | 1.1.7.36 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Peptidase_U32_C | 0.55 | 46.0 | 3.93e-01 | 93.9% | 72.2% |
| 4058533 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 42.0 | 3.97e-01 | 87.9% | 95.2% |
| 3785005 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.54 | 47.0 | 4.45e-01 | 97.0% | 79.5% |
| 3808601 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 50.0 | 4.60e-01 | 100.0% | 83.5% |
| 3183314 | 4.1.1.135 ↗ | beta barrels › SH3 › SH3 › SH3 › Nup188_SH3-like | 0.53 | 45.0 | 4.37e-01 | 93.9% | 86.7% |
| 3196012 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 44.0 | 4.10e-01 | 100.0% | 74.7% |
| 4963670 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 42.0 | 3.97e-01 | 92.4% | 95.3% |
| 4193090 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 46.0 | 3.97e-01 | 100.0% | 79.0% |
| 2668253 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 41.0 | 4.21e-01 | 93.9% | 96.9% |
| 3911248 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.51 | 47.0 | 4.19e-01 | 100.0% | 87.8% |
| 4009972 | 11.1.1.42 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PapD_C | 0.51 | 41.0 | 3.73e-01 | 93.9% | 90.5% |
| 4340146 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.51 | 37.0 | 2.71e-01 | 78.8% | 76.6% |
| 4024827 | 9.8.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Dipeptidyl peptidase I (cathepsin C), exclusion domain › Dipeptidyl peptidase I (cathepsin C), exclusion domain › CathepsinC_exc | 0.51 | 36.0 | 2.71e-01 | 77.3% | 98.9% |
| 4438733 | 4.1.1.178 ↗ | beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 | 0.51 | 44.0 | 3.73e-01 | 100.0% | 59.0% |
| 3624338 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 46.0 | 3.83e-01 | 100.0% | 99.1% |
| 3987928 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.50 | 41.0 | 3.73e-01 | 97.0% | 78.9% |