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IMGVR_UViG_3300002966_000910-3300002966-JGI24721J44947_1000064947

Arc-Vir

IMGVR_UViG_3300002966_000910-3300002966-JGI24721J44947_1000064947

Quality

76.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 63-177
PDB
CATH (61)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tg7A02 2.102.20.10 Mainly Beta › 3-layer Sandwich › beta-galactosidase, domain 2 › Beta-galactosidase, domain 2 0.73 45.0 3.80e-01 91.3% 38.7%
2oznA00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.73 61.0 5.83e-01 90.4% 91.7%
3esmA00 2.60.40.2230 Mainly Beta › Sandwich › Immunoglobulin-like › Uncharacterised protein YcnI-like PF07987, DUF1775 0.72 61.0 5.75e-01 90.4% 94.2%
2woyA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.70 59.0 5.29e-01 90.4% 96.8%
2mh4A00 2.60.40.1080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.68 50.0 5.53e-01 93.9% 94.6%
4liqE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 45.0 5.41e-01 92.2% 100.0%
1xezA02 2.70.240.20 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/Hemolysin toxin, cytolysin domain 0.68 57.0 3.95e-01 92.2% 66.9%
4nzjA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 47.0 5.19e-01 93.0% 90.1%
2yrlA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 47.0 5.35e-01 87.0% 98.8%
2lrgA00 2.60.60.60 Mainly Beta › Sandwich › Lipoxygenase-1 › 0.67 52.0 5.10e-01 83.5% 96.0%
2xskA00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 40.0 4.43e-01 72.2% 73.7%
1t0pB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 47.0 5.28e-01 92.2% 97.7%
1iamA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 46.0 5.27e-01 91.3% 100.0%
3anzC00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.66 56.0 4.19e-01 93.9% 92.2%
1cq3A00 2.60.240.10 Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › Major secreted virus protein 0.65 46.0 3.73e-01 73.0% 84.4%
1zxqA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 46.0 5.17e-01 92.2% 97.6%
4aq1A02 2.60.40.1080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 48.0 5.38e-01 92.2% 97.8%
3bn3B01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 46.0 5.21e-01 92.2% 97.7%
4i0nA00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.64 53.0 4.11e-01 90.4% 88.6%
4llfD02 2.60.40.4030 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 44.0 4.42e-01 71.3% 69.2%
3bc9A01 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 49.0 5.40e-01 91.3% 100.0%
1r6vA01 2.60.40.1800 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 49.0 4.80e-01 81.7% 91.2%
2hr0B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 50.0 5.20e-01 90.4% 89.0%
2di8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 48.0 5.27e-01 93.9% 96.8%
4m00A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 46.0 5.18e-01 93.0% 100.0%
1ohfA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.63 45.0 4.27e-01 83.5% 61.0%
6pimA02 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.63 43.0 4.76e-01 88.7% 88.0%
6lynD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 41.0 4.62e-01 89.6% 87.4%
2nykA02 2.60.40.2530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 41.0 4.65e-01 92.2% 88.5%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 45.0 4.83e-01 89.6% 89.5%
5dzxA04 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.62 46.0 4.88e-01 90.4% 86.5%
2covG00 2.60.40.2450 Mainly Beta › Sandwich › Immunoglobulin-like › Beta-1,3-xylanase, CBM31 domain 0.62 45.0 5.04e-01 93.9% 98.9%
2nqcA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 47.0 5.09e-01 94.8% 94.8%
3v8oA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 47.0 5.06e-01 99.1% 93.8%
4m9pA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 48.0 5.16e-01 93.9% 95.0%
1v05A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 48.0 5.19e-01 94.8% 97.9%
8owfA01 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 48.0 4.90e-01 82.6% 85.6%
2oq8A00 2.60.40.2930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 40.0 3.65e-01 82.6% 50.0%
3gldA02 2.60.40.1140 Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain 0.61 51.0 4.87e-01 92.2% 97.8%
1wlhA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 47.0 4.96e-01 93.9% 90.5%
4lzkA00 2.60.40.3910 Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein 0.60 56.0 4.96e-01 100.0% 86.8%
3rghA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 46.0 4.95e-01 94.8% 96.9%
2mogA00 2.60.40.1080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 44.0 4.73e-01 93.0% 92.6%
1qfhA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 41.0 4.39e-01 90.4% 83.2%
2dibA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 47.0 5.03e-01 93.0% 100.0%
4exkA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 48.0 5.05e-01 92.2% 96.2%
1pbyA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 38.0 4.44e-01 92.2% 100.0%
1ix2A00 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 48.0 5.10e-01 92.2% 100.0%
1cwvA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 46.0 4.91e-01 93.9% 96.1%
1gyvA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.58 49.0 4.85e-01 92.2% 98.3%
4q52A00 2.60.40.3910 Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein 0.57 52.0 4.52e-01 100.0% 91.4%
3turB01 2.60.40.3710 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 51.0 4.97e-01 99.1% 88.2%
3es6B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 46.0 4.64e-01 90.4% 88.1%
4umgA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 44.0 4.64e-01 93.9% 96.1%
2ds4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 4.70e-01 93.0% 96.2%
4g2aA01 2.60.40.3680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 46.0 3.73e-01 94.8% 94.9%
3lb9A00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.54 48.0 4.12e-01 99.1% 62.6%
3mnmA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.54 44.0 4.45e-01 89.6% 98.2%
3besR02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 4.48e-01 91.3% 92.8%
3uoaB02 2.60.40.3360 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 44.0 4.17e-01 91.3% 93.4%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.50 44.0 3.54e-01 100.0% 91.3%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4065437 11.13.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Leukocidin-like › Leukocidin-like › Leukocidin 0.79 67.0 4.87e-01 90.4% 97.3%
3873914 11.1.1.64 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ICAM_N 0.73 47.0 5.36e-01 90.4% 87.1%
3282461 11.1.5.28 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF1775 0.73 62.0 5.53e-01 90.4% 80.6%
3759551 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.71 49.0 4.33e-01 91.3% 48.8%
3972813 11.1.1.384 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › T2SS-T3SS_pil_N 0.69 46.0 5.23e-01 92.2% 91.8%
5051355 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.69 52.0 5.05e-01 78.3% 90.4%
3217721 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 48.0 5.50e-01 89.6% 98.8%
144497 11.1.1.64 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ICAM_N 0.67 47.0 5.36e-01 91.3% 97.6%
3732486 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 50.0 5.55e-01 92.2% 98.9%
3525469 11.1.1.64 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ICAM_N 0.67 47.0 5.34e-01 91.3% 97.6%
3884657 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.66 46.0 4.77e-01 89.6% 75.5%
4301893 3739.1.1.1 beta sandwiches › TraO N-terminal domain › TraO N-terminal domain › TraO N-terminal domain › CagX 0.66 50.0 4.98e-01 80.9% 84.2%
3886267 11.1.1.351 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › K319L-like_PKD 0.65 48.0 5.12e-01 92.2% 88.0%
3536722 11.1.1.351 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › K319L-like_PKD 0.65 49.0 5.38e-01 93.0% 95.8%
3710125 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.65 41.0 4.29e-01 80.9% 69.5%
3941680 3739.1.1.1 beta sandwiches › TraO N-terminal domain › TraO N-terminal domain › TraO N-terminal domain › CagX 0.65 50.0 4.65e-01 80.9% 80.0%
3921082 11.1.1.351 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › K319L-like_PKD 0.64 47.0 4.54e-01 89.6% 67.7%
5068359 11.1.1.249 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_9 0.64 49.0 5.29e-01 93.9% 96.8%
5069185 11.1.1.249 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_9 0.64 48.0 5.17e-01 93.0% 94.7%
5068266 11.1.1.249 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_9 0.64 49.0 5.26e-01 93.9% 94.0%
5069495 11.1.1.351 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › K319L-like_PKD 0.64 45.0 5.17e-01 91.3% 100.0%
5080991 11.1.1.351 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › K319L-like_PKD 0.64 48.0 5.25e-01 93.0% 96.8%
5069496 11.1.1.351 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › K319L-like_PKD 0.64 46.0 5.06e-01 93.0% 95.6%
3683389 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 51.0 5.05e-01 100.0% 79.7%
3789722 11.1.1.12 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.63 47.0 4.97e-01 100.0% 85.7%
3911622 11.1.1.12 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.63 48.0 4.94e-01 94.8% 82.7%
3261038 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 46.0 5.16e-01 91.3% 100.0%
3246454 11.1.1.876 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29962 0.61 46.0 5.02e-01 92.2% 96.8%
3239477 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 47.0 5.12e-01 92.2% 98.9%
5021830 11.1.1.130 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Inhibitor_I42 0.60 48.0 5.05e-01 89.6% 93.3%
3618338 11.1.1.12 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.59 45.0 4.78e-01 92.2% 91.0%
5070304 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 44.0 4.81e-01 93.9% 98.9%
3543596 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.59 42.0 3.74e-01 92.2% 50.6%
4969244 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 51.0 3.51e-01 95.7% 95.7%
3935228 11.1.1.590 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NUP210_Ig15 0.57 47.0 4.98e-01 93.0% 96.2%
3935221 11.1.1.817 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_NUP210_13th 0.57 48.0 4.87e-01 90.4% 99.1%
3401058 11.1.1.590 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NUP210_Ig15 0.57 49.0 5.09e-01 92.2% 99.0%
3972055 11.1.1.410 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BatD 0.57 47.0 4.70e-01 89.6% 95.0%
5070458 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 47.0 4.91e-01 93.0% 99.0%
3594978 11.8.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.56 49.0 3.91e-01 98.3% 84.6%
2411358 3678.1.1.1 alpha arrays › Pilus-presented adhesin helical insertion domain › Pilus-presented adhesin helical insertion domain › Pilus-presented adhesin helical insertion domain › TED 0.56 47.0 3.64e-01 92.2% 48.2%
5055627 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 41.0 4.37e-01 91.3% 90.0%
3570025 11.1.1.620 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TMEM132_6th 0.54 46.0 4.64e-01 91.3% 96.5%
3401059 11.1.1.604 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_NUP210_6th 0.54 45.0 4.70e-01 93.9% 99.0%
D2 medium residues 186-249
PDB
Domain cluster: representative