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IMGVR_UViG_3300002966_000910-3300002966-JGI24721J44947_1000064951
Arc-VirIMGVR_UViG_3300002966_000910-3300002966-JGI24721J44947_1000064951
Identity
- Kingdom:
- archaea
Quality
70.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-128
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kvpA00 | 6.20.140.10 | Special › Other non-globular › Immunoglobulin-like › | 0.71 | 26.0 | 4.38e-01 | 88.0% | 97.7% |
| 4m8rA01 | 2.60.40.3920 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 36.0 | 3.94e-01 | 76.8% | 67.0% |
| 2j73A00 | 2.60.40.1110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 40.0 | 4.30e-01 | 100.0% | 81.6% |
| 1m0wA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.57 | 38.0 | 4.09e-01 | 84.0% | 78.7% |
| 2bs2B01 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.53 | 33.0 | 3.54e-01 | 97.6% | 70.8% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 29.0 | 3.45e-01 | 78.4% | 80.2% |
| 4k6lG00 | 3.90.210.10 | Alpha Beta › Alpha-Beta Complex › Heat-Labile Enterotoxin; Chain A › Heat-Labile Enterotoxin, subunit A | 0.52 | 43.0 | 3.58e-01 | 89.6% | 68.3% |
| 3kvnA02 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.52 | 38.0 | 2.90e-01 | 77.6% | 48.7% |
| 3b5mA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 42.0 | 4.36e-01 | 89.6% | 93.3% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 29.0 | 3.17e-01 | 76.8% | 65.4% |
| 7rpyA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 38.0 | 4.19e-01 | 100.0% | 97.1% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3496483 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.62 | 39.0 | 4.19e-01 | 96.8% | 73.3% |
| 3442905 | 11.1.1.902 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_GEX2_N | 0.62 | 33.0 | 4.33e-01 | 76.8% | 96.9% |
| 4927782 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.61 | 25.0 | 3.47e-01 | 88.0% | 76.7% |
| 5019886 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.60 | 26.0 | 3.32e-01 | 88.0% | 66.7% |
| 3939695 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 30.0 | 3.45e-01 | 76.8% | 64.4% |
| 1170462 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.57 | 23.0 | 3.20e-01 | 84.8% | 75.4% |
| 2471637 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.54 | 45.0 | 4.30e-01 | 90.4% | 94.6% |
| 4988502 | 375.1.1.298 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_HMPTM | 0.54 | 22.0 | 3.42e-01 | 82.4% | 100.0% |
| 3166677 | 3792.1.1.0 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain | 0.54 | 33.0 | 3.83e-01 | 92.8% | 88.2% |
| 5030436 | 4111.1.1.0 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like | 0.54 | 41.0 | 4.22e-01 | 87.2% | 84.6% |
| 3989984 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.53 | 32.0 | 3.26e-01 | 87.2% | 58.4% |
| 3785319 | 9.14.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 | 0.53 | 24.0 | 2.88e-01 | 75.2% | 60.0% |
| 5019887 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.53 | 29.0 | 3.65e-01 | 80.0% | 91.8% |
| 3598687 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.51 | 45.0 | 4.14e-01 | 97.6% | 84.4% |