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IMGVR_UViG_3300003306_000068-3300003306-Ga0004534J46558_100372310
Arc-VirIMGVR_UViG_3300003306_000068-3300003306-Ga0004534J46558_100372310
Identity
- Kingdom:
- archaea
Quality
70.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-55
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lcqA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.69 | 44.0 | 5.03e-01 | 77.4% | 92.1% |
| 5g5tA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 47.0 | 3.47e-01 | 88.7% | 75.8% |
| 4tpuA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.61 | 40.0 | 4.37e-01 | 79.2% | 97.3% |
| 2bbwA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 42.0 | 2.82e-01 | 75.5% | 22.7% |
| 4aybP00 | 2.20.28.30 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › RNA polymerase ii, chain L | 0.59 | 40.0 | 4.19e-01 | 71.7% | 88.6% |
| 4mamB03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.58 | 42.0 | 2.97e-01 | 81.1% | 95.2% |
| 1ak2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 44.0 | 3.04e-01 | 90.6% | 48.2% |
| 1u04A03 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 44.0 | 3.16e-01 | 90.6% | 31.5% |
| 2dnfA01 | 3.10.20.230 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Doublecortin domain | 0.56 | 39.0 | 3.41e-01 | 100.0% | 44.9% |
| 2xb4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 44.0 | 2.93e-01 | 92.5% | 46.2% |
| 3b8fB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 40.0 | 3.03e-01 | 84.9% | 62.0% |
| 3zyvC06 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.52 | 45.0 | 2.93e-01 | 100.0% | 41.4% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.52 | 38.0 | 2.99e-01 | 79.2% | 74.2% |
| 2hg2A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.52 | 42.0 | 2.74e-01 | 98.1% | 66.1% |
| 1gh9A00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.52 | 40.0 | 3.82e-01 | 96.2% | 78.9% |
| 2jaeA02 | 3.90.660.10 | Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › | 0.51 | 44.0 | 3.08e-01 | 100.0% | 88.5% |
| 1epfA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.26e-01 | 84.9% | 56.2% |
| 3tr9B00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.51 | 38.0 | 2.59e-01 | 90.6% | 90.4% |
| 5of3A00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.50 | 41.0 | 2.64e-01 | 100.0% | 40.1% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4931152 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 47.0 | 5.56e-01 | 77.4% | 97.1% |
| 5017094 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 46.0 | 4.60e-01 | 81.1% | 63.6% |
| 4948217 | 375.4.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like | 0.72 | 47.0 | 5.30e-01 | 79.2% | 90.0% |
| 4967717 | 375.1.1.181 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PALP | 0.71 | 46.0 | 5.48e-01 | 77.4% | 100.0% |
| 4933437 | 101.1.9.83 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM | 0.65 | 54.0 | 4.23e-01 | 100.0% | 44.4% |
| 4300471 | 101.1.9.83 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM | 0.65 | 54.0 | 4.35e-01 | 100.0% | 46.7% |
| 4933617 | 375.11.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain in CopZ › Zinc-binding domain in CopZ › NAPRTase_C | 0.62 | 57.0 | 4.95e-01 | 100.0% | 78.5% |
| 4992429 | 375.12.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Nicotinate phosphoribosyltransferase C-terminal domain-related › Nicotinate phosphoribosyltransferase C-terminal domain-related | 0.62 | 57.0 | 4.53e-01 | 100.0% | 60.0% |
| 4938827 | 101.1.9.83 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM | 0.62 | 49.0 | 3.99e-01 | 86.8% | 82.8% |
| 5056653 | 375.1.1.64 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RUBY_RBDX | 0.62 | 43.0 | 4.68e-01 | 90.6% | 93.0% |
| 3422075 | 101.1.9.83 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM | 0.61 | 45.0 | 3.53e-01 | 81.1% | 75.7% |
| 4627511 | 101.1.9.83 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM | 0.59 | 48.0 | 3.59e-01 | 100.0% | 36.9% |
| 5065034 | 2003.1.4.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2_2 | 0.57 | 43.0 | 2.73e-01 | 88.7% | 14.9% |
| 5022651 | 375.11.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain in CopZ › Zinc-binding domain in CopZ | 0.57 | 50.0 | 4.57e-01 | 100.0% | 90.0% |
| 4957781 | 807.1.1.0 ↗ | a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) | 0.56 | 40.0 | 4.13e-01 | 100.0% | 80.0% |
| 3248665 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 38.0 | 3.68e-01 | 71.7% | 66.7% |
| 4074841 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.55 | 40.0 | 3.88e-01 | 86.8% | 67.7% |
| 4283998 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.55 | 34.0 | 3.35e-01 | 96.2% | 55.0% |
| 4946661 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 42.0 | 4.22e-01 | 88.7% | 100.0% |
| 1316646 | 3016.1.1.13 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SepSecS | 0.53 | 47.0 | 3.60e-01 | 98.1% | 76.3% |
| 5032144 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.52 | 39.0 | 2.82e-01 | 90.6% | 36.0% |
| 3175097 | 101.1.9.83 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM | 0.52 | 38.0 | 2.83e-01 | 81.1% | 51.3% |
| 3309579 | 304.137.1.0 ↗ | a+b two layers › Alpha-beta plaits › NOL1/NOP2/sun N-terminal ferredoxin-like domain › NOL1/NOP2/sun N-terminal ferredoxin-like domain | 0.51 | 40.0 | 4.03e-01 | 88.7% | 98.2% |
| 3226292 | 5050.1.1.6 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › OATP | 0.51 | 40.0 | 2.70e-01 | 94.3% | 64.6% |