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IMGVR_UViG_3300003306_000068-3300003306-Ga0004534J46558_10037234
Arc-VirIMGVR_UViG_3300003306_000068-3300003306-Ga0004534J46558_10037234
Identity
- Kingdom:
- archaea
Quality
89.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-54
Domain cluster:
representative
D2
medium
residues 55-139
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mg4A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 38.0 | 4.22e-01 | 84.7% | 84.8% |
| 6z01B01 | 1.10.10.41 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Yeast DNA topoisomerase - domain 1 | 0.58 | 40.0 | 4.13e-01 | 72.9% | 78.2% |
| 3ppbA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 47.0 | 3.61e-01 | 89.4% | 48.4% |
| 3gziA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 44.0 | 3.35e-01 | 95.3% | 78.8% |
| 7a8zB01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.51 | 39.0 | 3.83e-01 | 83.5% | 80.2% |
| 1q2zA00 | 1.25.40.240 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ku, C-terminal domain | 0.51 | 36.0 | 3.22e-01 | 100.0% | 52.5% |
| 2cfoA05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.50 | 38.0 | 3.64e-01 | 83.5% | 85.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 169449 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.67 | 45.0 | 4.83e-01 | 78.8% | 81.1% |
| 134552 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.62 | 42.0 | 4.28e-01 | 77.6% | 72.0% |
| 3739025 | 103.1.1.57 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › GDH2_N | 0.56 | 31.0 | 3.40e-01 | 81.2% | 62.9% |
| 3407435 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.56 | 44.0 | 4.14e-01 | 88.2% | 85.5% |
| 4929144 | 4057.1.1.1 ↗ | alpha arrays › Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment › Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment › Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment › Topoisom_I_N | 0.55 | 38.0 | 3.81e-01 | 72.9% | 71.1% |
| 3410177 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 44.0 | 4.26e-01 | 94.1% | 92.0% |
| 3598778 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.53 | 36.0 | 3.86e-01 | 71.8% | 90.0% |
| 3260793 | 101.1.1.10 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › ARID | 0.51 | 40.0 | 3.52e-01 | 88.2% | 90.4% |