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IMGVR_UViG_3300003492_000010-3300003492-JGI26245J51145_10012649

Arc-Vir

IMGVR_UViG_3300003492_000010-3300003492-JGI26245J51145_10012649

Quality

61.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-59
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.78 67.0 5.80e-01 100.0% 88.2%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 67.0 5.80e-01 95.7% 80.0%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 64.0 5.55e-01 100.0% 77.3%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.74 65.0 5.53e-01 100.0% 63.6%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.73 62.0 4.49e-01 100.0% 65.5%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 56.0 4.52e-01 87.2% 66.7%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 62.0 5.61e-01 100.0% 90.9%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 63.0 5.20e-01 100.0% 56.5%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 62.0 5.63e-01 100.0% 93.8%
4c57B00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.70 62.0 3.72e-01 100.0% 26.6%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 62.0 5.79e-01 100.0% 96.6%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 59.0 5.99e-01 100.0% 97.9%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 60.0 4.96e-01 100.0% 70.9%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.68 51.0 4.09e-01 85.1% 76.9%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.68 53.0 3.85e-01 87.2% 59.0%
1b7yB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 52.0 3.97e-01 87.2% 79.3%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 57.0 5.30e-01 100.0% 95.1%
1ew3A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 56.0 3.99e-01 100.0% 61.6%
6ipaA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 52.0 3.62e-01 87.2% 52.1%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 56.0 5.30e-01 100.0% 100.0%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 56.0 5.06e-01 100.0% 91.0%
3d31A03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.63 49.0 4.43e-01 91.5% 74.6%
3mzkB01 6.20.50.30 Special › Other non-globular › N-terminal domain of TfIIb › 0.63 42.0 4.45e-01 70.2% 84.2%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 48.0 3.52e-01 85.1% 62.1%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.63 50.0 3.69e-01 95.7% 41.8%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 47.0 4.71e-01 85.1% 91.8%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.62 46.0 3.44e-01 80.9% 91.9%
3e8lC00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.62 49.0 3.49e-01 100.0% 93.2%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.61 43.0 3.47e-01 76.6% 40.6%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.61 48.0 4.64e-01 100.0% 86.4%
1fx7B03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.60 49.0 4.26e-01 100.0% 83.7%
1o97C00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 49.0 3.20e-01 97.9% 55.0%
6ci7A01 3.30.160.660 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 49.0 3.77e-01 100.0% 87.7%
2ownA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 44.0 2.82e-01 85.1% 38.3%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 45.0 2.73e-01 95.7% 38.0%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 40.0 2.54e-01 74.5% 17.4%
6aonA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 46.0 3.62e-01 100.0% 98.4%
4dokA01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.57 43.0 3.16e-01 89.4% 83.2%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.57 45.0 3.30e-01 95.7% 76.1%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.57 41.0 3.49e-01 80.9% 56.0%
5t5lA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 48.0 3.11e-01 100.0% 69.4%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.57 48.0 3.08e-01 100.0% 94.6%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 46.0 3.52e-01 100.0% 87.0%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.56 42.0 2.85e-01 91.5% 42.7%
2iwtB00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 41.0 2.96e-01 91.5% 56.9%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.55 46.0 2.97e-01 100.0% 93.5%
1jnrB02 6.20.260.10 Special › Other non-globular › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Adenylylsulphate reductase, beta subunit, C-terminal domain 0.55 37.0 3.17e-01 70.2% 42.2%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.55 41.0 3.30e-01 91.5% 86.7%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.54 36.0 2.95e-01 72.3% 41.3%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 40.0 3.32e-01 100.0% 64.2%
3q2wA04 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.52 36.0 2.91e-01 76.6% 71.4%
1vwxH02 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.51 40.0 3.34e-01 100.0% 86.4%
3f3fD01 2.20.25.500 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.50 35.0 3.45e-01 72.3% 66.7%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3978624 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.86 77.0 5.50e-01 100.0% 36.9%
4024913 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 64.0 5.73e-01 100.0% 64.6%
3264806 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 64.0 6.33e-01 95.7% 86.0%
3389311 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 67.0 5.22e-01 100.0% 47.0%
3214006 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 63.0 4.70e-01 100.0% 73.8%
3393297 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 65.0 5.51e-01 100.0% 58.7%
3621818 4.1.1.333 beta barrels › SH3 › SH3 › SH3 › PF29330 0.75 65.0 6.37e-01 100.0% 90.0%
3464886 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.74 67.0 6.19e-01 100.0% 88.3%
3940829 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 58.0 4.45e-01 87.2% 58.2%
3592540 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 66.0 6.08e-01 100.0% 80.0%
3304602 4.1.1.427 beta barrels › SH3 › SH3 › SH3 › F-box 0.73 62.0 4.97e-01 100.0% 47.4%
2106277 4.1.1.24 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.73 64.0 4.74e-01 100.0% 38.7%
25850 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 56.0 4.56e-01 87.2% 67.0%
3482680 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 64.0 5.77e-01 100.0% 92.3%
3555993 4.1.1.77 beta barrels › SH3 › SH3 › SH3 › VGCC_beta4Aa_N 0.73 56.0 4.24e-01 87.2% 52.5%
3706998 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 64.0 5.93e-01 100.0% 78.3%
3566631 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 64.0 5.36e-01 100.0% 75.0%
4001976 4.1.1.77 beta barrels › SH3 › SH3 › SH3 › VGCC_beta4Aa_N 0.72 55.0 4.37e-01 87.2% 60.0%
4028731 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 64.0 5.78e-01 100.0% 87.7%
4218488 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.72 63.0 5.33e-01 100.0% 75.0%
3372822 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 64.0 5.45e-01 100.0% 74.7%
3533318 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.72 63.0 6.20e-01 100.0% 92.0%
3890642 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 59.0 4.29e-01 95.7% 84.3%
3587060 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.72 57.0 4.95e-01 89.4% 88.0%
3549597 4.1.1.77 beta barrels › SH3 › SH3 › SH3 › VGCC_beta4Aa_N 0.71 60.0 4.47e-01 100.0% 67.7%
3496961 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 52.0 4.69e-01 78.7% 58.5%
3489317 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 52.0 5.30e-01 78.7% 84.4%
3787441 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 62.0 5.03e-01 100.0% 66.7%
3479042 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 62.0 5.46e-01 100.0% 84.3%
3999846 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 61.0 5.29e-01 100.0% 80.0%
3581631 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 60.0 5.46e-01 100.0% 92.3%
4988423 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.69 60.0 5.07e-01 100.0% 78.8%
3907870 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 60.0 5.10e-01 100.0% 70.9%
3936225 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 58.0 5.20e-01 100.0% 82.9%
3601552 9.1.1.4 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META 0.69 57.0 4.50e-01 100.0% 93.6%
3232165 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 57.0 4.74e-01 100.0% 98.9%
3938415 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 59.0 5.34e-01 100.0% 93.8%
119159 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.66 49.0 4.50e-01 85.1% 60.9%
4096140 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.66 49.0 3.69e-01 83.0% 90.4%
3805925 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.66 53.0 3.28e-01 95.7% 25.2%
3708732 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.65 53.0 3.23e-01 93.6% 21.9%
5018537 5090.1.1.0 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.65 53.0 4.25e-01 95.7% 84.0%
3557698 220.1.1.122 beta barrels › PH domain-like › PH domain-like › PH domain-like › C2_SHIP1-2_first 0.65 55.0 4.38e-01 100.0% 75.0%
4044269 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.64 53.0 4.80e-01 100.0% 70.0%
5047575 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.64 47.0 3.57e-01 83.0% 89.6%
3767975 220.1.1.38 beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.64 53.0 4.17e-01 100.0% 73.6%
6331 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.63 48.0 3.51e-01 85.1% 61.7%
5063311 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.63 50.0 5.09e-01 95.7% 97.8%
5043506 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.63 47.0 3.49e-01 83.0% 88.0%
3640699 5.1.4.408 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C 0.62 49.0 3.02e-01 93.6% 41.2%
3930399 4075.1.1.0 a+b complex topology › RGC domain › RGC domain › RGC domain 0.62 49.0 4.06e-01 95.7% 88.9%
5070586 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.62 46.0 3.49e-01 83.0% 89.6%
5054384 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.61 44.0 3.94e-01 78.7% 54.3%
4983063 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.61 45.0 3.40e-01 83.0% 89.6%
5060852 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.59 41.0 4.24e-01 76.6% 88.9%
3427602 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.58 44.0 2.78e-01 89.4% 28.9%
4931496 220.1.1.76 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.58 47.0 3.69e-01 100.0% 83.3%
3958768 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 42.0 3.73e-01 87.2% 88.7%
3871253 220.1.1.122 beta barrels › PH domain-like › PH domain-like › PH domain-like › C2_SHIP1-2_first 0.57 44.0 3.40e-01 100.0% 59.3%
3605378 719.1.1.0 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.55 44.0 3.58e-01 100.0% 63.6%
3954510 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 43.0 3.51e-01 100.0% 87.0%
3607792 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 43.0 2.67e-01 93.6% 22.9%
3257265 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.54 41.0 2.99e-01 87.2% 36.0%
3520914 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 45.0 2.47e-01 100.0% 9.0%
4939734 244.3.1.8 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › DUF6951 0.52 44.0 3.50e-01 100.0% 96.2%
3284788 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.52 42.0 3.68e-01 97.9% 78.8%
3440964 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.52 37.0 2.39e-01 87.2% 22.5%
D2 medium residues 70-167
PDB
D3 medium residues 170-244
PDB
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 60.0 6.61e-01 97.3% 96.7%
4ad9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 71.0 6.81e-01 97.3% 84.5%
5y6iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 61.0 6.21e-01 97.3% 82.2%
2l4mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 59.0 6.17e-01 96.0% 85.5%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 5.89e-01 100.0% 72.4%
6qv3A05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 69.0 6.38e-01 98.7% 92.5%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 5.70e-01 94.7% 77.4%
4esjA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 5.69e-01 97.3% 74.4%
1stzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 5.54e-01 96.0% 75.3%
1ussA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 59.0 5.62e-01 100.0% 83.0%
7s03A01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.68 43.0 5.04e-01 78.7% 98.0%
2klqA00 1.20.58.870 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 59.0 5.18e-01 98.7% 84.2%
3ol4A02 1.10.10.2390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.67 50.0 5.36e-01 97.3% 100.0%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 5.29e-01 96.0% 81.6%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 56.0 5.00e-01 98.7% 70.8%
1cbyA00 3.40.198.10 Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like 0.61 54.0 3.83e-01 97.3% 75.8%
3keyA02 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.61 54.0 5.17e-01 100.0% 93.2%
3kheA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 52.0 4.68e-01 100.0% 91.6%
4kw3A00 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.58 41.0 2.82e-01 74.7% 51.1%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 38.0 3.80e-01 80.0% 69.7%
8k1fC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 46.0 3.42e-01 93.3% 35.7%
4a15A03 1.10.275.40 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › 0.54 44.0 3.70e-01 93.3% 78.6%
2fbqA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 45.0 3.34e-01 96.0% 68.5%
1dpgA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 40.0 3.07e-01 78.7% 52.6%
1eqfA02 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.53 41.0 3.54e-01 85.3% 75.2%
2gf4A00 1.20.1270.110 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Uncharacterised protein family UPF0058 0.53 36.0 3.41e-01 70.7% 61.4%
3a7eA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 41.0 3.10e-01 90.7% 51.4%
3sllA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.51 37.0 4.05e-01 86.7% 96.7%
3bemB00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.50 43.0 3.18e-01 97.3% 71.3%
3ltoA01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.50 42.0 3.23e-01 94.7% 65.6%
3nskB00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.50 34.0 3.26e-01 72.0% 75.0%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3998933 101.1.2.160 alpha arrays › HTH › HTH › winged helix domain › BLACT_WH 0.88 61.0 7.09e-01 81.3% 98.2%
4996616 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 61.0 6.88e-01 81.3% 96.6%
4972648 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.83 77.0 5.06e-01 100.0% 41.8%
4946932 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 66.0 7.00e-01 84.0% 100.0%
4933514 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 67.0 5.36e-01 97.3% 46.4%
4948481 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.82 75.0 5.03e-01 98.7% 31.0%
3861472 101.1.2.160 alpha arrays › HTH › HTH › winged helix domain › BLACT_WH 0.82 68.0 7.14e-01 92.0% 97.1%
5035389 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 66.0 6.31e-01 97.3% 76.5%
5030693 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 68.0 5.98e-01 97.3% 63.8%
3600895 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 70.0 5.87e-01 94.7% 88.3%
5071634 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.79 72.0 4.65e-01 100.0% 40.1%
4506359 101.1.2.751 alpha arrays › HTH › HTH › winged helix domain › DUF6293_C 0.79 70.0 6.68e-01 96.0% 83.5%
3272642 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 70.0 6.44e-01 98.7% 83.2%
3786649 101.1.2.392 alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH 0.78 71.0 6.51e-01 100.0% 92.6%
3478717 101.1.2.392 alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH 0.77 71.0 6.09e-01 100.0% 77.4%
3738271 101.1.2.166 alpha arrays › HTH › HTH › winged helix domain › MCM6_C 0.77 68.0 5.96e-01 97.3% 80.9%
4107264 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 69.0 5.90e-01 97.3% 72.2%
3637782 101.1.2.160 alpha arrays › HTH › HTH › winged helix domain › BLACT_WH 0.77 68.0 6.51e-01 96.0% 97.6%
4937898 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.77 69.0 4.47e-01 100.0% 25.7%
4950205 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 68.0 5.98e-01 98.7% 77.3%
3648804 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 67.0 5.78e-01 96.0% 73.9%
5061575 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 65.0 5.95e-01 98.7% 71.0%
5007356 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.76 69.0 4.44e-01 100.0% 68.7%
4972323 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.76 68.0 4.51e-01 100.0% 42.0%
3733392 101.1.2.166 alpha arrays › HTH › HTH › winged helix domain › MCM6_C 0.76 66.0 5.73e-01 97.3% 85.2%
5028531 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 62.0 5.84e-01 97.3% 74.4%
3519165 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 66.0 6.39e-01 100.0% 85.9%
3551106 101.1.2.165 alpha arrays › HTH › HTH › winged helix domain › ORC_WH_C 0.75 67.0 5.84e-01 100.0% 70.4%
3382543 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 66.0 6.23e-01 97.3% 81.1%
3832037 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 65.0 4.34e-01 96.0% 25.4%
3167709 101.1.2.166 alpha arrays › HTH › HTH › winged helix domain › MCM6_C 0.75 64.0 5.62e-01 97.3% 81.7%
3622328 101.1.2.466 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C 0.75 63.0 6.37e-01 98.7% 93.2%
4976066 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 65.0 6.45e-01 98.7% 96.2%
3360648 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 64.0 5.11e-01 96.0% 48.3%
3943865 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 66.0 5.60e-01 98.7% 60.8%
5074030 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.74 67.0 4.44e-01 100.0% 42.8%
4575460 101.1.2.166 alpha arrays › HTH › HTH › winged helix domain › MCM6_C 0.73 63.0 5.62e-01 97.3% 87.3%
3450793 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.73 63.0 5.12e-01 96.0% 50.7%
3493601 101.1.2.166 alpha arrays › HTH › HTH › winged helix domain › MCM6_C 0.73 63.0 5.57e-01 97.3% 88.2%
3442602 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.73 64.0 5.83e-01 98.7% 73.0%
5048015 101.1.2.158 alpha arrays › HTH › HTH › winged helix domain › DpnI_C 0.72 61.0 5.99e-01 97.3% 85.0%
5056343 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 63.0 5.30e-01 98.7% 57.6%
3441807 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.72 62.0 6.02e-01 98.7% 85.9%
3392763 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 63.0 6.07e-01 97.3% 84.7%
5046136 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 64.0 5.14e-01 98.7% 56.4%
3443063 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.71 63.0 4.71e-01 97.3% 45.0%
3443035 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 62.0 5.48e-01 96.0% 67.6%
3696441 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.71 64.0 6.18e-01 100.0% 96.5%
4108761 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.71 63.0 4.98e-01 98.7% 50.0%
3663727 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.71 62.0 5.59e-01 98.7% 73.3%
3168448 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.71 64.0 5.29e-01 100.0% 58.9%
3466475 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.70 62.0 5.12e-01 98.7% 56.2%
3447799 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.70 62.0 5.16e-01 98.7% 57.7%
5028855 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 58.0 5.61e-01 96.0% 81.2%
3477053 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 63.0 6.23e-01 100.0% 95.0%
3433965 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.70 61.0 5.00e-01 98.7% 56.4%
3450159 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.69 60.0 4.89e-01 98.7% 51.7%
4966184 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.69 49.0 4.56e-01 84.0% 58.9%
3436081 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.69 52.0 5.28e-01 96.0% 83.6%
3163573 101.1.2.52 alpha arrays › HTH › HTH › winged helix domain › KicB 0.69 59.0 5.15e-01 96.0% 68.7%
3464139 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.68 60.0 5.21e-01 97.3% 64.3%
3661546 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.68 58.0 4.93e-01 98.7% 56.8%
3680263 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.68 60.0 4.51e-01 96.0% 43.4%
3802262 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.68 60.0 4.90e-01 98.7% 52.9%
4965059 101.1.2.911 alpha arrays › HTH › HTH › winged helix domain › DUF5827 0.68 58.0 5.81e-01 94.7% 93.3%
3420789 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.68 59.0 5.10e-01 98.7% 81.7%
3659873 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.68 60.0 5.34e-01 98.7% 71.4%
3441608 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.67 59.0 5.62e-01 98.7% 83.3%
4588402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 57.0 5.73e-01 100.0% 96.0%
3434805 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.67 60.0 5.36e-01 100.0% 77.1%
3296790 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.67 58.0 5.25e-01 98.7% 71.4%
4543264 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 58.0 4.59e-01 100.0% 47.3%
3429589 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.67 59.0 4.74e-01 98.7% 51.7%
3451047 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.67 59.0 5.04e-01 98.7% 62.5%
3444653 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.66 58.0 4.91e-01 98.7% 60.0%
3676374 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.66 57.0 4.58e-01 98.7% 48.4%
4107533 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.66 58.0 4.85e-01 98.7% 58.5%
4931927 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 58.0 5.36e-01 98.7% 78.9%
3372061 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.65 58.0 4.73e-01 100.0% 55.7%
3946046 101.1.2.52 alpha arrays › HTH › HTH › winged helix domain › KicB 0.65 49.0 4.90e-01 80.0% 81.3%
3423032 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.65 57.0 4.72e-01 100.0% 55.0%
3827266 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 56.0 4.58e-01 98.7% 53.1%
3246949 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 55.0 5.39e-01 98.7% 96.2%
3781990 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 54.0 5.20e-01 97.3% 91.8%
3213911 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.62 39.0 3.29e-01 100.0% 37.6%
4426191 101.1.3.26 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › YcbB 0.60 50.0 4.01e-01 96.0% 77.5%
3257601 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.57 48.0 3.29e-01 96.0% 37.5%
3936824 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.57 48.0 3.11e-01 97.3% 35.9%
3742338 2003.1.5.165 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11, Methyltransf_23 0.56 48.0 3.36e-01 97.3% 36.1%
3287546 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.55 47.0 3.28e-01 96.0% 37.8%
4954375 601.7.1.20 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Abi_C 0.55 40.0 3.47e-01 78.7% 54.2%
3958066 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 43.0 2.82e-01 100.0% 46.0%
4981951 4163.1.1.0 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like 0.51 46.0 4.08e-01 100.0% 76.2%
D4 medium residues 291-347
PDB