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IMGVR_UViG_3300003495_000448-3300003495-JGI26244J51143_10031744

Arc-Vir

IMGVR_UViG_3300003495_000448-3300003495-JGI26244J51143_10031744

Identity

Kingdom:
archaea

Quality

80.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 85-288
PDB
Domain cluster: rep: LacPavin_0818_WC45_scaffold_30120_prodigal-single.1__X__X__00032__D47-218
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13671.13 best AAA_33 38.4 2.10e-09 78.4% 82.5%
D2 high residues 350-417
PDB
Domain cluster: rep: IMGVR_UViG_3300000154_000123-3300000154-SI47jul10_150mDRAFT_10038242__D354-417
D3 high residues 434-510
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01467.33 best CTP_transf_like 24.8 2.90e-05 97.4% 55.6%
CATH (72)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qjoA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.86 80.0 5.80e-01 100.0% 46.9%
1ej2A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.86 80.0 6.05e-01 100.0% 55.7%
2qjtB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.85 80.0 5.76e-01 100.0% 48.0%
3nbkD00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.80 74.0 5.68e-01 100.0% 47.2%
3nv7A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.79 73.0 5.70e-01 100.0% 49.7%
3nd5A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.77 70.0 5.46e-01 100.0% 49.3%
3elbA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.76 69.0 5.33e-01 100.0% 51.5%
4ymiB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.76 68.0 5.02e-01 100.0% 45.5%
1cozA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.75 67.0 5.70e-01 100.0% 64.3%
3glvA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.75 67.0 5.76e-01 100.0% 68.0%
1yumA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.74 67.0 4.84e-01 100.0% 42.5%
2h29A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.74 68.0 5.01e-01 100.0% 48.9%
1jhdA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.74 67.0 4.87e-01 100.0% 46.8%
2va1B00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.74 67.0 4.68e-01 100.0% 61.3%
2a1fC00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.74 66.0 4.64e-01 100.0% 61.2%
4wsoA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.72 64.0 4.61e-01 100.0% 41.4%
1r6xA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.71 63.0 4.56e-01 98.7% 43.7%
2cvbA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.69 59.0 4.46e-01 94.8% 41.2%
3cr8C02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.69 62.0 4.57e-01 100.0% 47.0%
1mkyA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 61.0 4.90e-01 100.0% 53.9%
1mrzA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.68 60.0 4.77e-01 98.7% 57.6%
2bgwB01 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 61.0 5.14e-01 100.0% 64.1%
1qrsA05 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.68 59.0 5.13e-01 98.7% 69.9%
1sulB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 60.0 4.46e-01 100.0% 41.0%
1j24A00 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.67 60.0 5.02e-01 100.0% 62.4%
5hciC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 60.0 4.20e-01 100.0% 45.1%
2zejB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 59.0 5.41e-01 100.0% 91.1%
1wy5A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.66 58.0 4.24e-01 100.0% 45.2%
3dr5A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 52.0 3.87e-01 98.7% 31.9%
1bapA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 53.0 4.21e-01 90.9% 47.9%
6ia6A01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.65 56.0 3.87e-01 96.1% 46.0%
2bmjA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 56.0 4.41e-01 100.0% 48.9%
3axsA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 52.0 3.51e-01 100.0% 21.7%
3ldtA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.65 54.0 4.41e-01 92.2% 76.4%
6khnA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.64 52.0 3.56e-01 89.6% 29.6%
1u3dA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 56.0 4.47e-01 100.0% 54.0%
2ho4B01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.64 55.0 4.42e-01 100.0% 57.1%
3a2kA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 55.0 4.69e-01 100.0% 72.6%
3oesA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 56.0 4.49e-01 100.0% 49.0%
1nowA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 55.0 3.62e-01 100.0% 55.8%
1ni5A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.63 55.0 3.99e-01 100.0% 41.4%
2b5xA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.62 54.0 4.43e-01 98.7% 60.8%
3hgmA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 53.0 4.39e-01 100.0% 74.1%
3m1aJ00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 53.0 3.73e-01 100.0% 85.0%
7lgnB03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.61 53.0 4.45e-01 100.0% 55.8%
3loqA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.61 53.0 4.51e-01 100.0% 60.5%
7t85A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 53.0 4.22e-01 100.0% 78.9%
3a2bA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.60 53.0 3.81e-01 100.0% 57.4%
1iq0A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 51.0 3.35e-01 98.7% 65.1%
1m0wA04 3.40.50.1760 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic 0.60 48.0 4.11e-01 89.6% 60.5%
4fo5A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 52.0 4.35e-01 98.7% 66.2%
3kebB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 52.0 4.07e-01 98.7% 55.8%
4c0kA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 53.0 4.81e-01 100.0% 75.7%
1ycoA00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.59 50.0 3.52e-01 97.4% 36.2%
7exbA01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.59 51.0 3.55e-01 100.0% 64.9%
4mcjG00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 45.0 3.69e-01 100.0% 42.2%
1ogyA03 3.40.228.10 Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 0.59 47.0 3.26e-01 88.3% 74.2%
1cqxA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.58 51.0 4.21e-01 100.0% 64.8%
3bkxA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 48.0 3.40e-01 100.0% 27.5%
1p1mA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.58 49.0 3.44e-01 100.0% 32.0%
1auqA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.58 51.0 3.75e-01 100.0% 88.5%
7zghA01 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.57 49.0 3.11e-01 96.1% 69.2%
3ie7A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.57 50.0 3.36e-01 100.0% 84.5%
3cpgA00 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.57 48.0 3.41e-01 96.1% 60.5%
7fctA01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.57 50.0 3.58e-01 100.0% 35.7%
4c2jA01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.56 47.0 3.62e-01 100.0% 46.6%
2h3gX02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 47.0 3.78e-01 94.8% 72.3%
3e3mA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 44.0 3.70e-01 89.6% 55.2%
8ajjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 48.0 4.30e-01 100.0% 72.8%
4rhaA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.55 46.0 4.02e-01 100.0% 92.4%
2g1pB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 46.0 3.76e-01 97.4% 80.8%
3upuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 46.0 3.52e-01 97.4% 65.9%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
198154 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.86 80.0 5.89e-01 100.0% 49.5%
5044213 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.86 80.0 5.92e-01 100.0% 53.9%
1174413 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.85 80.0 5.86e-01 100.0% 51.1%
5048623 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.85 79.0 5.85e-01 100.0% 50.8%
4993881 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.85 79.0 7.05e-01 100.0% 88.6%
5057907 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.83 77.0 5.72e-01 100.0% 57.2%
5058337 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.83 76.0 5.95e-01 100.0% 54.8%
4280853 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.81 75.0 5.72e-01 100.0% 48.8%
4234724 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.80 75.0 5.80e-01 100.0% 51.6%
4883752 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.80 75.0 5.74e-01 100.0% 48.4%
4166454 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.80 74.0 5.73e-01 98.7% 49.0%
4317465 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.80 73.0 5.65e-01 98.7% 50.0%
4678223 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.80 74.0 5.57e-01 100.0% 44.5%
4541117 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.80 74.0 5.76e-01 100.0% 49.7%
3964816 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.79 74.0 5.61e-01 100.0% 49.1%
3956511 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.79 73.0 5.75e-01 100.0% 60.0%
4161621 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.78 72.0 5.68e-01 100.0% 53.3%
4611002 2005.1.1.35 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Citrate_ly_lig 0.78 72.0 5.10e-01 100.0% 49.3%
None — 0.78 71.0 5.57e-01 100.0% 54.2%
5074075 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.78 71.0 5.68e-01 100.0% 60.0%
4120130 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.78 71.0 5.49e-01 100.0% 48.5%
4283528 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.78 72.0 6.11e-01 100.0% 67.5%
4624430 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.78 71.0 5.45e-01 100.0% 50.9%
3949157 2005.1.1.35 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Citrate_ly_lig 0.77 70.0 5.01e-01 100.0% 48.8%
4128505 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.76 70.0 5.45e-01 100.0% 51.2%
4928484 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.76 68.0 5.28e-01 98.7% 50.9%
4641274 2005.1.1.15 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase 0.76 69.0 4.82e-01 100.0% 38.7%
4237400 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.75 69.0 5.24e-01 100.0% 52.4%
4155711 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.75 68.0 4.99e-01 100.0% 46.0%
4613788 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.75 68.0 4.98e-01 100.0% 45.5%
5023379 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.75 68.0 4.91e-01 100.0% 42.9%
5082884 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.75 67.0 5.28e-01 100.0% 51.9%
3717806 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.75 67.0 5.32e-01 100.0% 52.9%
3594669 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.75 67.0 5.37e-01 100.0% 54.7%
4946514 2005.1.1.15 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase 0.75 68.0 4.77e-01 100.0% 40.4%
4557557 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.74 67.0 5.42e-01 100.0% 57.9%
3220371 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.74 66.0 5.49e-01 100.0% 60.0%
4575016 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.73 65.0 4.83e-01 100.0% 46.5%
4406262 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.73 66.0 4.91e-01 100.0% 47.9%
3590641 2005.1.1.45 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DUF218 0.73 66.0 5.06e-01 100.0% 60.0%
3507232 2005.2.1.1 ↗ a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 0.73 65.0 4.93e-01 100.0% 55.1%
4033573 2005.2.1.1 ↗ a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 0.72 65.0 4.60e-01 100.0% 40.9%
4988321 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.71 63.0 5.54e-01 100.0% 66.1%
3286171 2005.2.1.1 ↗ a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 0.71 63.0 4.68e-01 98.7% 50.3%
4579452 2005.2.1.1 ↗ a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 0.70 62.0 4.54e-01 100.0% 42.9%
4974336 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.69 63.0 5.08e-01 100.0% 57.9%
3176177 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.68 60.0 4.41e-01 100.0% 42.4%
4071658 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.68 60.0 4.59e-01 100.0% 47.2%
5045112 2008.1.1.7 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.68 62.0 4.83e-01 100.0% 55.0%
4031792 2004.1.1.36 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N 0.67 59.0 4.25e-01 100.0% 38.7%
5029904 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.66 52.0 4.21e-01 85.7% 52.0%
4945737 2008.1.1.7 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.66 60.0 4.71e-01 100.0% 54.2%
3282791 2005.2.1.1 ↗ a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 0.66 56.0 4.41e-01 100.0% 52.6%
3717757 2004.1.1.16 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.65 56.0 4.12e-01 100.0% 43.1%
3309390 2004.1.1.16 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.65 57.0 4.84e-01 100.0% 69.2%
4980564 7592.1.1.0 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.65 57.0 4.70e-01 100.0% 55.2%
3963923 2005.2.1.1 ↗ a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 0.65 55.0 4.39e-01 100.0% 53.2%
4273678 2005.2.1.1 ↗ a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 0.65 55.0 3.96e-01 100.0% 40.0%
5059127 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.64 57.0 4.83e-01 100.0% 70.8%
3667202 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.64 56.0 5.35e-01 100.0% 90.0%
4499405 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.64 55.0 3.95e-01 100.0% 38.0%
3245213 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.64 57.0 5.16e-01 100.0% 77.9%
3683753 2007.5.1.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SASA 0.64 54.0 3.90e-01 100.0% 93.2%
5069206 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.63 55.0 4.17e-01 100.0% 41.5%
5045845 7570.1.1.1 ↗ a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C 0.63 54.0 4.46e-01 100.0% 53.3%
4311946 2003.1.5.80 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_24 0.62 53.0 3.96e-01 100.0% 36.4%
5067783 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.62 53.0 4.78e-01 98.7% 75.2%
2842011 7570.1.1.1 ↗ a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C 0.61 53.0 4.33e-01 100.0% 50.7%
4972770 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.60 51.0 3.90e-01 98.7% 43.6%
3839012 2002.1.1.53 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.60 51.0 3.73e-01 96.1% 43.7%
4506589 2003.1.1.120 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA 0.59 52.0 3.92e-01 100.0% 52.3%
3783666 2003.1.5.26 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_28 0.59 52.0 3.24e-01 98.7% 19.1%
5004192 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.59 48.0 3.56e-01 100.0% 33.3%
4856098 7577.1.1.4 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Pyridoxal_deC 0.59 51.0 3.66e-01 100.0% 60.6%
4991470 7545.1.1.1 ↗ a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrE 0.58 50.0 4.54e-01 100.0% 94.5%
3387931 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.58 51.0 3.85e-01 98.7% 44.2%
4227896 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.58 50.0 3.46e-01 100.0% 27.1%
3511837 7514.1.1.1 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.58 50.0 4.18e-01 100.0% 63.6%
3307718 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.56 46.0 4.05e-01 92.2% 97.5%
4988970 7545.1.1.0 ↗ a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like 0.56 50.0 4.63e-01 100.0% 91.8%
3504010 247.1.1.0 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.56 48.0 3.25e-01 98.7% 32.5%
3969453 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.55 46.0 3.60e-01 100.0% 40.5%
3963729 2495.1.1.1 ↗ a/b three-layered sandwiches › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain › MinC_N 0.54 44.0 4.24e-01 96.1% 87.4%
4153819 4143.1.1.1 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.52 45.0 4.15e-01 98.7% 92.0%
3731744 7514.1.1.1 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.50 42.0 3.42e-01 100.0% 56.5%
4954382 2006.1.4.50 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 0.50 42.0 3.40e-01 100.0% 58.8%
D4 medium residues 15-75
PDB
Domain cluster: rep: Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00804__D1-57
D5 medium residues 294-330
PDB