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IMGVR_UViG_3300003501_000064-3300003501-JGI26243J51142_100259611
Arc-VirIMGVR_UViG_3300003501_000064-3300003501-JGI26243J51142_100259611
Identity
- Kingdom:
- archaea
Quality
96.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-69
Domain cluster:
rep: SRR1747035_scaffold_2_prodigal-single.1__X__X__00126__D1-82
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pusA02 | 1.10.287.540 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.61 | 40.0 | 4.32e-01 | 87.5% | 83.0% |
| 2gnoA03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.56 | 42.0 | 3.69e-01 | 100.0% | 53.0% |
| 1rw9A01 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.56 | 42.0 | 2.67e-01 | 84.4% | 18.4% |
| 1a31A03 | 3.90.15.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 | 0.54 | 36.0 | 2.82e-01 | 70.3% | 39.3% |
| 7dg2C01 | 1.10.10.1200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif | 0.51 | 34.0 | 3.28e-01 | 93.8% | 60.0% |
| 4nleA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.51 | 41.0 | 4.01e-01 | 96.9% | 86.8% |
| 1yaxB00 | 3.30.450.140 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PhoQ sensor domain | 0.51 | 42.0 | 3.39e-01 | 96.9% | 91.8% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3466836 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.56 | 48.0 | 4.26e-01 | 100.0% | 72.4% |
| 2875916 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.53 | 33.0 | 3.33e-01 | 89.1% | 60.3% |
| 3487611 | 101.1.8.3 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Topoisom_I,Topo_C_assoc | 0.51 | 39.0 | 3.75e-01 | 92.2% | 72.0% |