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IMGVR_UViG_3300003501_000123-3300003501-JGI26243J51142_10053191
Arc-VirIMGVR_UViG_3300003501_000123-3300003501-JGI26243J51142_10053191
Identity
- Kingdom:
- archaea
Quality
65.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-46
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gr0D01 | 3.30.70.1780 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 44.0 | 4.59e-01 | 97.7% | 73.2% |
| 2p67A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 54.0 | 3.61e-01 | 100.0% | 42.7% |
| 3u4qB03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 49.0 | 3.31e-01 | 100.0% | 70.6% |
| 1o63A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.60 | 49.0 | 3.65e-01 | 100.0% | 34.7% |
| 1yksA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 50.0 | 3.38e-01 | 100.0% | 24.4% |
| 2p62A01 | 3.40.50.10620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PH0156-like domains | 0.55 | 43.0 | 3.19e-01 | 100.0% | 41.2% |
| 2lbwA00 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.54 | 41.0 | 3.09e-01 | 86.4% | 97.5% |
| 1h3dA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 45.0 | 3.30e-01 | 100.0% | 35.1% |
| 2vyoA00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.51 | 44.0 | 2.85e-01 | 100.0% | 80.1% |
| 3utoA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 40.0 | 2.93e-01 | 100.0% | 31.5% |
| 1cdzA00 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.50 | 38.0 | 3.12e-01 | 97.7% | 40.6% |
| 3uh0A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.50 | 40.0 | 3.07e-01 | 100.0% | 39.5% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3611430 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 54.0 | 3.45e-01 | 100.0% | 67.5% |
| 4021888 | 2004.1.1.499 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2, Helicase_C_2 | 0.66 | 51.0 | 2.93e-01 | 100.0% | 40.2% |
| 4024959 | 3676.1.1.0 ↗ | alpha duplicates or obligate multimers › RNA helicase Hera dimerization domain › RNA helicase Hera dimerization domain › RNA helicase Hera dimerization domain | 0.61 | 50.0 | 3.05e-01 | 100.0% | 58.2% |
| 3605804 | 7525.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 | 0.61 | 49.0 | 3.13e-01 | 100.0% | 71.0% |
| 3833268 | 2004.1.1.24 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C | 0.57 | 43.0 | 2.48e-01 | 100.0% | 28.0% |
| 3690970 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 44.0 | 2.79e-01 | 100.0% | 57.1% |
| 2997375 | 2485.1.1.9 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › 2Fe-2S_thioredx | 0.55 | 46.0 | 4.36e-01 | 100.0% | 81.8% |
| 4930551 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 38.0 | 2.85e-01 | 77.3% | 68.0% |
| 3682936 | 2003.1.14.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase › OTCace_N | 0.52 | 42.0 | 2.97e-01 | 100.0% | 27.4% |
| 3414877 | 4.27.1.1 ↗ | beta barrels › SH3 › Mitoribosomal protein mS34 › Mitoribosomal protein mS34 › MRP-S34 | 0.51 | 32.0 | 2.23e-01 | 86.4% | 15.3% |
| 3283928 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.51 | 39.0 | 2.89e-01 | 90.9% | 80.7% |
| 4404925 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.50 | 40.0 | 3.92e-01 | 100.0% | 86.0% |