←Back to structures
IMGVR_UViG_3300003581_000206-3300003581-JGI26257J51711_10014822
Arc-VirIMGVR_UViG_3300003581_000206-3300003581-JGI26257J51711_10014822
Identity
- Kingdom:
- archaea
Quality
88.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-41
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zhxA04 | 3.30.70.3490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.85 | 70.0 | 4.88e-01 | 94.9% | 29.1% |
D2
medium
residues 59-102
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3noyB02 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.74 | 51.0 | 4.04e-01 | 75.0% | 37.9% |
| 1nw2A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.70 | 51.0 | 3.86e-01 | 77.3% | 80.0% |
| 3vfiA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.68 | 50.0 | 3.83e-01 | 79.5% | 80.8% |
| 5j7dC00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.68 | 49.0 | 3.67e-01 | 77.3% | 78.3% |
| 2nbsA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.66 | 46.0 | 3.48e-01 | 77.3% | 70.7% |
| 3fvcA01 | 2.30.30.1230 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 52.0 | 4.27e-01 | 88.6% | 76.2% |
| 3fhkA02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.65 | 46.0 | 3.41e-01 | 77.3% | 78.3% |
| 2lrcA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.64 | 46.0 | 3.50e-01 | 77.3% | 75.0% |
| 2gumB01 | 2.30.30.1230 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 47.0 | 3.71e-01 | 88.6% | 81.0% |
| 4amcA01 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.60 | 45.0 | 4.44e-01 | 81.8% | 82.6% |
| 4khbD02 | 2.30.29.220 | Mainly Beta › Roll › PH-domain like › Structure-specific recognition protein (SSRP1) | 0.59 | 44.0 | 3.59e-01 | 100.0% | 44.4% |
| 2ej8B00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 43.0 | 3.04e-01 | 77.3% | 54.2% |
| 1xqbA02 | 3.30.2310.10 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › YaeB-like | 0.58 | 48.0 | 4.06e-01 | 97.7% | 55.3% |
| 3gmiA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 40.0 | 2.64e-01 | 86.4% | 95.4% |
| 2r0hA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 42.0 | 3.03e-01 | 97.7% | 29.4% |
| 2gjwC01 | 3.40.1350.150 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 37.0 | 2.63e-01 | 77.3% | 60.7% |
| 2fpnA02 | 3.30.360.40 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › YwmB-like | 0.51 | 40.0 | 3.59e-01 | 90.9% | 81.5% |
| 3vn5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.51 | 39.0 | 3.45e-01 | 88.6% | 59.4% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4316823 | 296.1.1.3 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 | 0.78 | 54.0 | 3.98e-01 | 75.0% | 30.5% |
| 4077601 | 296.1.1.3 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 | 0.74 | 52.0 | 3.97e-01 | 75.0% | 34.6% |
| 3631797 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.69 | 51.0 | 3.03e-01 | 79.5% | 18.4% |
| 4665982 | 296.1.1.0 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 | 0.68 | 49.0 | 3.86e-01 | 79.5% | 35.0% |
| 3958912 | 296.1.1.0 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 | 0.67 | 48.0 | 3.81e-01 | 79.5% | 35.0% |
| 3385150 | 7516.1.1.51 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_21 | 0.66 | 55.0 | 3.19e-01 | 95.5% | 81.3% |
| 4472027 | 2485.1.1.22 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Disulph_isomer | 0.63 | 46.0 | 3.40e-01 | 79.5% | 68.5% |
| 4031431 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.59 | 39.0 | 3.54e-01 | 70.5% | 56.9% |
| 4526691 | 6043.1.1.0 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like | 0.54 | 48.0 | 4.22e-01 | 100.0% | 75.4% |
| 3730087 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 37.0 | 3.27e-01 | 81.8% | 43.0% |
| 5034935 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.53 | 40.0 | 3.68e-01 | 100.0% | 64.3% |
| 2756608 | 270.1.1.0 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related | 0.50 | 33.0 | 2.85e-01 | 70.5% | 35.4% |
| 3646130 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.50 | 45.0 | 2.75e-01 | 100.0% | 40.4% |