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IMGVR_UViG_3300003604_000018-3300003604-JGI26464J51801_10016202

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300003604_000018-3300003604-JGI26464J51801_10016202 ↗
Kingdom:: archaea

Quality

85.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-86

PDB

Domain cluster: representative

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
7kdfB01	1.10.418.60	Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Ncd80 complex, Nuf2 subunit	0.60	44.0	3.70e-01	78.0%	74.7%
2m3aA00	1.10.10.1900	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Knl-2 Myb-like DNA-binding domain-like	0.60	39.0	4.27e-01	87.8%	82.1%
2dofA00	1.10.10.440	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain	0.57	40.0	3.97e-01	93.9%	70.6%
1umqA00	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.55	32.0	3.69e-01	76.8%	78.3%
3l09A01	1.20.58.1460	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.52	37.0	3.50e-01	74.4%	100.0%
2fefA01	1.20.1440.70	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › PA2201 N-terminal domain-like	0.52	38.0	3.39e-01	80.5%	65.6%
2rpaA00	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.52	36.0	3.70e-01	74.4%	76.6%
4hteA01	1.20.58.1730	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.51	40.0	3.41e-01	85.4%	79.0%
3ragB00	3.40.50.410	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain	0.51	37.0	2.75e-01	84.1%	27.9%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3944499	6050.1.1.0 ↗	a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone	0.74	64.0	6.37e-01	100.0%	94.1%
3921287	108.1.1.0 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand	0.63	54.0	5.09e-01	96.3%	95.0%
5049143	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.59	40.0	3.65e-01	80.5%	51.8%
3662905	101.1.1.29 ↗	alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3	0.59	34.0	4.05e-01	82.9%	85.5%
4982372	150.1.1.3 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin	0.59	44.0	3.45e-01	80.5%	61.1%
3711850	109.4.1.202 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16	0.58	44.0	3.75e-01	84.1%	55.6%
4290066	172.2.1.1 ↗	alpha complex topology › Citrate synthase-like › Urease accessory protein ureF › Urease accessory protein ureF › UreF	0.55	47.0	3.55e-01	98.8%	76.4%
4315512	101.1.4.0 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like	0.55	43.0	3.81e-01	87.8%	93.1%
4961900	101.1.1.187 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_33	0.54	36.0	3.82e-01	82.9%	76.0%
3591491	189.1.1.0 ↗	alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP	0.53	45.0	3.40e-01	98.8%	45.0%
4930612	4009.1.1.4 ↗	alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › DUF3243	0.52	41.0	4.21e-01	86.6%	93.8%
3238440	101.1.1.21 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5	0.52	38.0	4.12e-01	91.5%	100.0%
3224331	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.50	35.0	3.39e-01	73.2%	90.5%