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IMGVR_UViG_3300003830_000835-3300003830-Ga0051980_1000005025
Arc-VirIMGVR_UViG_3300003830_000835-3300003830-Ga0051980_1000005025
Identity
- Kingdom:
- archaea
Quality
89.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-87
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13475.12 best | DUF4116 | 28.0 | 1.80e-06 | 58.6% | 100.0% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ajcA01 | 1.10.220.30 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain | 0.64 | 52.0 | 4.98e-01 | 92.0% | 95.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3720823 | 109.4.1.1255 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 | 0.72 | 64.0 | 3.78e-01 | 100.0% | 18.5% |
| 3370375 | 109.4.1.2953 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N, Cse1, HEAT_IPO9_c, TPR_IPO11 | 0.68 | 59.0 | 3.39e-01 | 100.0% | 18.5% |
| 3354743 | 109.4.1.1861 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N, Cse1, TPR_IPO11 | 0.65 | 56.0 | 3.22e-01 | 100.0% | 19.5% |
| 4244780 | 109.4.1.890 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_C | 0.65 | 56.0 | 4.05e-01 | 100.0% | 47.0% |
| 3614288 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 56.0 | 3.49e-01 | 98.9% | 40.0% |
| 3691607 | 109.4.1.1479 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_PRP39_N | 0.63 | 53.0 | 3.51e-01 | 100.0% | 33.6% |
| 3260155 | 109.4.1.414 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MMS19_N | 0.61 | 53.0 | 3.93e-01 | 100.0% | 53.8% |
| 4927476 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 48.0 | 4.21e-01 | 95.4% | 96.6% |
D2
medium
residues 88-174
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rg8A00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.68 | 60.0 | 5.08e-01 | 100.0% | 91.3% |
| 3hqiA02 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.61 | 48.0 | 4.22e-01 | 88.5% | 59.3% |
| 2xmzA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 45.0 | 3.32e-01 | 98.9% | 91.0% |
| 2yvkA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.51 | 45.0 | 3.78e-01 | 98.9% | 75.0% |