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IMGVR_UViG_3300003830_000835-3300003830-Ga0051980_1000005055

Arc-Vir

IMGVR_UViG_3300003830_000835-3300003830-Ga0051980_1000005055

Identity

Kingdom:
archaea

Quality

81.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-65
PDB
Domain cluster: rep: hypothetical_protein__NP_042514__Peanut_chlorotic_streak_virus__35593__D80-128
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01693.24 best Cauli_VI 56.5 3.70e-15 89.6% 73.3%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7w6yA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.57 40.0 3.44e-01 93.8% 45.7%
1jkxA00 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.54 41.0 2.83e-01 93.8% 32.5%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
338289 4076.1.1.2 ↗ a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Cauli_VI 0.94 78.0 7.73e-01 100.0% 84.0%
3675227 4076.1.1.2 ↗ a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Cauli_VI 0.90 81.0 7.96e-01 100.0% 92.0%
4000195 4076.1.1.2 ↗ a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Cauli_VI 0.85 75.0 7.46e-01 100.0% 92.0%
3465504 4076.1.1.0 ↗ a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like 0.77 66.0 6.57e-01 97.9% 96.0%
3467232 4076.1.1.0 ↗ a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like 0.76 66.0 5.89e-01 100.0% 70.0%
3458900 4076.1.1.2 ↗ a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Cauli_VI 0.75 64.0 6.23e-01 100.0% 89.1%
3484879 4076.1.1.0 ↗ a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like 0.74 64.0 6.31e-01 100.0% 92.0%
3529839 386.1.1.257 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_Z280C_D 0.69 49.0 5.21e-01 77.1% 92.5%
3862518 4076.1.1.2 ↗ a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Cauli_VI 0.68 60.0 5.75e-01 100.0% 100.0%
3790266 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.66 47.0 3.80e-01 79.2% 39.0%
3186804 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 41.0 4.21e-01 97.9% 73.3%
4963 4012.1.1.1 ↗ a+b two layers › SSHS domain › SSHS domain in type II DNA topoisomerase › SSHS domain in type II DNA topoisomerase › TOPRIM_C 0.58 41.0 4.34e-01 75.0% 97.7%
3609555 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 47.0 4.69e-01 100.0% 92.0%
3388528 7056.1.1.0 ↗ few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan 0.55 38.0 4.10e-01 72.9% 97.5%
3994982 221.1.2.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif 0.50 32.0 3.23e-01 77.1% 62.0%
D2 high residues 96-211
PDB
Domain cluster: rep: OQ808965.1__WGH50389.1__FNU3_71__00071__D62-192