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IMGVR_UViG_3300003830_000837-3300003830-Ga0051980_1000007454

Arc-Vir

IMGVR_UViG_3300003830_000837-3300003830-Ga0051980_1000007454

Identity

Kingdom:
archaea

Quality

80.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-94
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4m8aA00 3.30.720.210 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.60 42.0 4.69e-01 100.0% 98.5%
4ftfA00 3.30.300.250 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.60 47.0 4.52e-01 98.9% 73.4%
2as0A01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.57 35.0 3.95e-01 80.2% 81.4%
3vm7A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.56 33.0 3.28e-01 97.8% 52.0%
4v0bA00 3.30.720.210 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.56 37.0 4.24e-01 100.0% 96.8%
2rcnA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 28.0 3.30e-01 75.8% 67.2%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 33.0 3.80e-01 96.7% 83.3%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 33.0 3.76e-01 96.7% 83.6%
4oijA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 33.0 3.69e-01 98.9% 81.7%
2oap101 3.30.450.380 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.52 46.0 3.53e-01 100.0% 75.1%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 28.0 3.23e-01 98.9% 71.2%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.52 30.0 3.37e-01 95.6% 75.8%
4hb9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 40.0 2.74e-01 86.8% 45.3%
4z32A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 40.0 3.96e-01 97.8% 83.3%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5068015 319.1.1.4 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.63 48.0 5.13e-01 96.7% 100.0%
3603793 1.1.9.17 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.61 39.0 4.30e-01 85.7% 84.3%
4172991 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.60 41.0 4.58e-01 100.0% 92.9%
4246158 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.60 41.0 4.67e-01 98.9% 100.0%
1388503 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.59 41.0 4.58e-01 100.0% 97.1%
4443386 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.58 37.0 4.31e-01 100.0% 100.0%
4500951 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.57 37.0 4.22e-01 100.0% 100.0%
3967396 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.56 38.0 4.25e-01 100.0% 96.9%
4534864 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.56 38.0 4.22e-01 100.0% 92.9%
4024158 1.1.9.17 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.55 37.0 3.85e-01 89.0% 78.8%
5065820 244.4.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › PF27537 0.54 42.0 3.36e-01 84.6% 100.0%
3931369 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 24.0 3.12e-01 79.1% 74.0%
3976533 3943.1.1.5 ↗ beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › WZC_N 0.52 38.0 3.70e-01 75.8% 71.0%
4418637 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.52 41.0 2.65e-01 86.8% 35.2%
3513810 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 41.0 3.63e-01 87.9% 81.5%
4288656 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.51 39.0 2.56e-01 84.6% 35.7%
4117361 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.51 40.0 2.67e-01 86.8% 42.4%
3665166 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.50 36.0 2.51e-01 74.7% 65.4%
4248008 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.50 40.0 2.63e-01 89.0% 23.6%
3194130 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.50 43.0 2.86e-01 97.8% 95.2%
3633728 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.50 40.0 3.75e-01 87.9% 84.3%