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IMGVR_UViG_3300003830_000837-3300003830-Ga0051980_1000007456
Arc-VirIMGVR_UViG_3300003830_000837-3300003830-Ga0051980_1000007456
Identity
- Kingdom:
- archaea
Quality
77.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 28-242
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.62 | 27.0 | 4.04e-01 | 70.7% | 92.6% |
| 2onlC01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 22.0 | 3.37e-01 | 78.6% | 79.1% |
| 2f8mA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 25.0 | 3.82e-01 | 87.4% | 100.0% |
| 4bhqA00 | 3.30.70.2830 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 29.0 | 4.01e-01 | 84.7% | 100.0% |
| 2cz4A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 26.0 | 3.72e-01 | 72.6% | 100.0% |
| 1k8kD01 | 3.30.1460.20 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 30.0 | 3.50e-01 | 83.3% | 77.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5012702 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.68 | 29.0 | 3.95e-01 | 70.7% | 73.9% |
| 4389430 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.68 | 28.0 | 3.88e-01 | 70.2% | 73.6% |
| 3602727 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.67 | 27.0 | 4.13e-01 | 71.2% | 87.8% |
| 4096306 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.62 | 29.0 | 3.92e-01 | 71.2% | 82.6% |
| 3839205 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.62 | 26.0 | 3.43e-01 | 82.8% | 68.3% |
| 4937023 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.57 | 27.0 | 3.84e-01 | 71.2% | 95.0% |
| 3384789 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.53 | 28.0 | 3.68e-01 | 86.5% | 96.4% |