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IMGVR_UViG_3300004069_000063-3300004069-Ga0063354_10012982
Arc-VirIMGVR_UViG_3300004069_000063-3300004069-Ga0063354_10012982
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-91
Domain cluster:
rep: MZ417522.1__QXN67741.1__X__00024__D64-158
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z19A01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.87 | 81.0 | 7.77e-01 | 100.0% | 92.0% |
| 3lysA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.86 | 79.0 | 7.48e-01 | 100.0% | 87.6% |
| 2kobA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.82 | 75.0 | 7.46e-01 | 100.0% | 96.8% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.82 | 75.0 | 7.38e-01 | 98.9% | 92.6% |
| 2kj9A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.81 | 75.0 | 6.75e-01 | 100.0% | 77.1% |
| 2keyA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.73 | 64.0 | 6.03e-01 | 100.0% | 83.0% |
| 2ffjA01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.69 | 39.0 | 4.74e-01 | 83.1% | 89.3% |
| 2w96A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 50.0 | 4.61e-01 | 94.4% | 64.6% |
| 1tvzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.65 | 52.0 | 4.47e-01 | 98.9% | 53.7% |
| 1lxlA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.65 | 52.0 | 3.94e-01 | 88.8% | 67.9% |
| 3d3mA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.64 | 45.0 | 3.76e-01 | 74.2% | 48.4% |
| 1w98B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.64 | 50.0 | 4.59e-01 | 93.3% | 64.9% |
| 4esjA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 52.0 | 5.27e-01 | 97.8% | 90.0% |
| 1ywmA02 | 1.20.1270.150 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Surface Active Protein | 0.62 | 39.0 | 4.21e-01 | 84.3% | 75.0% |
| 1zp2A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 45.0 | 4.19e-01 | 92.1% | 60.9% |
| 3rr1A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.61 | 52.0 | 4.54e-01 | 94.4% | 71.5% |
| 6z4xA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 46.0 | 3.91e-01 | 92.1% | 48.4% |
| 2qgyB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.60 | 50.0 | 4.39e-01 | 94.4% | 78.8% |
| 1g2nA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.60 | 48.0 | 3.63e-01 | 92.1% | 66.7% |
| 3gyuA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.59 | 49.0 | 3.61e-01 | 92.1% | 54.5% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.57 | 47.0 | 4.81e-01 | 91.0% | 98.8% |
| 3u4qA02 | 1.10.274.50 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › | 0.57 | 47.0 | 4.01e-01 | 93.3% | 78.7% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.56 | 43.0 | 4.18e-01 | 100.0% | 72.8% |
| 1dcnA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.56 | 40.0 | 4.40e-01 | 91.0% | 94.4% |
| 3f2eA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 44.0 | 4.56e-01 | 98.9% | 97.6% |
| 1ed1A00 | 1.10.150.90 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 | 0.56 | 49.0 | 4.55e-01 | 100.0% | 91.2% |
| 2p9xA00 | 1.10.1200.200 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Protein of unknown function DUF3227 | 0.55 | 46.0 | 4.47e-01 | 98.9% | 83.7% |
| 2qgaB03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.55 | 36.0 | 3.99e-01 | 93.3% | 89.4% |
| 2lrmA00 | 1.10.890.30 | Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein | 0.55 | 33.0 | 3.42e-01 | 98.9% | 63.1% |
| 3ilkA02 | 1.10.8.590 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.55 | 34.0 | 3.74e-01 | 92.1% | 80.9% |
| 3c8tA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.54 | 41.0 | 4.07e-01 | 91.0% | 74.2% |
| 3c02A00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.54 | 41.0 | 3.07e-01 | 82.0% | 86.0% |
| 3idwA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.54 | 37.0 | 4.06e-01 | 93.3% | 98.5% |
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.52 | 38.0 | 4.02e-01 | 98.9% | 85.2% |
| 7ae2A01 | 1.20.120.580 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like | 0.52 | 38.0 | 3.40e-01 | 78.7% | 51.8% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.52 | 34.0 | 3.20e-01 | 91.0% | 54.7% |
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.52 | 40.0 | 4.21e-01 | 93.3% | 93.7% |
| 1j78A05 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.52 | 33.0 | 3.84e-01 | 80.9% | 98.3% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 41.0 | 4.31e-01 | 92.1% | 97.6% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.51 | 42.0 | 4.20e-01 | 93.3% | 91.1% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.50 | 34.0 | 3.42e-01 | 82.0% | 67.4% |
| 2hjmA01 | 1.20.120.460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like | 0.50 | 42.0 | 4.25e-01 | 100.0% | 95.3% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4318189 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.92 | 87.0 | 8.18e-01 | 100.0% | 93.3% |
| 4173849 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.91 | 85.0 | 7.84e-01 | 98.9% | 87.3% |
| 3291009 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.90 | 85.0 | 7.95e-01 | 100.0% | 87.6% |
| 4969225 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.90 | 84.0 | 7.70e-01 | 98.9% | 86.4% |
| 3956495 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.90 | 84.0 | 7.77e-01 | 100.0% | 81.8% |
| 5054950 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.89 | 84.0 | 7.35e-01 | 100.0% | 83.2% |
| 5083073 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.89 | 83.0 | 7.83e-01 | 100.0% | 89.5% |
| 5034381 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.89 | 83.0 | 7.56e-01 | 100.0% | 85.2% |
| 4473841 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.89 | 83.0 | 7.81e-01 | 100.0% | 91.4% |
| 4520087 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.88 | 82.0 | 7.90e-01 | 100.0% | 96.0% |
| 2319286 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.87 | 82.0 | 7.78e-01 | 100.0% | 88.2% |
| 4334667 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.87 | 81.0 | 7.79e-01 | 100.0% | 92.0% |
| 5022016 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.86 | 79.0 | 7.76e-01 | 100.0% | 91.6% |
| 4465167 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.86 | 79.0 | 7.36e-01 | 100.0% | 92.7% |
| 4034350 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.86 | 79.0 | 7.23e-01 | 100.0% | 80.9% |
| 5000879 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.85 | 79.0 | 7.17e-01 | 100.0% | 81.7% |
| 3165066 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.84 | 78.0 | 6.94e-01 | 100.0% | 75.8% |
| 4663744 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.84 | 77.0 | 7.16e-01 | 100.0% | 81.8% |
| 4981576 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.83 | 73.0 | 7.30e-01 | 95.5% | 92.2% |
| 136582 | 186.1.1.8 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M | 0.82 | 75.0 | 7.26e-01 | 100.0% | 90.0% |
| 5028331 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.82 | 74.0 | 7.31e-01 | 100.0% | 92.6% |
| 3989289 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.81 | 66.0 | 6.91e-01 | 95.5% | 96.2% |
| 4198887 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.81 | 76.0 | 7.13e-01 | 100.0% | 86.7% |
| 4994276 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.81 | 70.0 | 7.05e-01 | 98.9% | 92.2% |
| 3926773 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.81 | 62.0 | 6.05e-01 | 84.3% | 74.7% |
| 4932919 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.81 | 70.0 | 7.05e-01 | 95.5% | 92.2% |
| 5030306 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.80 | 71.0 | 7.01e-01 | 98.9% | 90.5% |
| 3899400 | 633.4.1.14 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PCAF_N | 0.78 | 66.0 | 5.35e-01 | 91.0% | 89.4% |
| 3906268 | 2498.1.1.120 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › PCAF_N | 0.77 | 65.0 | 5.37e-01 | 91.0% | 92.3% |
| 3526452 | 213.1.1.88 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › PCAF_N | 0.77 | 65.0 | 5.37e-01 | 91.0% | 92.3% |
| 3770692 | 3345.1.1.2 ↗ | alpha arrays › MRG domain › MRG domain › MRG domain › PCAF_N | 0.77 | 65.0 | 5.36e-01 | 91.0% | 92.3% |
| 4959042 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.76 | 63.0 | 6.02e-01 | 94.4% | 77.1% |
| 4959578 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.75 | 68.0 | 6.72e-01 | 100.0% | 94.7% |
| 3767388 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.67 | 51.0 | 4.60e-01 | 96.6% | 58.4% |
| 4995419 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.66 | 54.0 | 5.56e-01 | 89.9% | 96.5% |
| 4485423 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.66 | 51.0 | 4.62e-01 | 96.6% | 60.8% |
| 3901205 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.65 | 51.0 | 4.72e-01 | 100.0% | 65.2% |
| 3833444 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.65 | 46.0 | 4.19e-01 | 92.1% | 55.0% |
| 5082367 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.63 | 40.0 | 4.60e-01 | 82.0% | 87.7% |
| 3810077 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.62 | 55.0 | 4.61e-01 | 100.0% | 80.6% |
| 5073852 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.61 | 50.0 | 4.49e-01 | 100.0% | 63.2% |
| 5045083 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.61 | 50.0 | 3.92e-01 | 100.0% | 41.6% |
| 5049306 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 50.0 | 4.61e-01 | 97.8% | 69.6% |
| 3596835 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 42.0 | 4.28e-01 | 71.9% | 77.6% |
| 5053768 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 49.0 | 3.26e-01 | 95.5% | 52.7% |
| 4253012 | 131.2.1.5 ↗ | alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like › HD, PF27444 | 0.57 | 47.0 | 3.41e-01 | 92.1% | 50.0% |
| 3782183 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.56 | 41.0 | 2.62e-01 | 84.3% | 14.8% |
| 5001051 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.56 | 37.0 | 4.34e-01 | 86.5% | 100.0% |
| 4929546 | 6049.1.1.0 ↗ | alpha bundles › PH0832-like › PH0832-like › PH0832-like | 0.56 | 41.0 | 4.43e-01 | 92.1% | 100.0% |
| 4354447 | 1197.1.1.1 ↗ | alpha bundles › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › G3P_acyltransf | 0.55 | 47.0 | 3.74e-01 | 94.4% | 78.3% |
| 3976180 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.54 | 47.0 | 3.66e-01 | 100.0% | 58.6% |
| 5053821 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.53 | 44.0 | 4.27e-01 | 93.3% | 86.0% |
| 3424514 | 606.1.1.0 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.53 | 39.0 | 3.62e-01 | 84.3% | 59.2% |
| 4025273 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.52 | 32.0 | 3.66e-01 | 71.9% | 87.3% |
| 3604298 | 4163.1.1.4 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › PF27418 | 0.52 | 41.0 | 3.94e-01 | 95.5% | 75.0% |
| 4980270 | 1075.5.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt | 0.51 | 43.0 | 3.40e-01 | 97.8% | 92.7% |
| 5054493 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.51 | 43.0 | 3.36e-01 | 96.6% | 84.6% |
| 4343661 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.51 | 39.0 | 3.63e-01 | 86.5% | 64.9% |
| 3170639 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.51 | 38.0 | 3.92e-01 | 91.0% | 82.4% |
| 4133287 | 1197.1.1.1 ↗ | alpha bundles › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › G3P_acyltransf | 0.51 | 41.0 | 3.36e-01 | 95.5% | 64.2% |
| 5036066 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.51 | 39.0 | 3.78e-01 | 85.4% | 73.0% |
| 4209288 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.50 | 38.0 | 3.56e-01 | 82.0% | 68.7% |
D2
high
residues 107-261
Domain cluster:
rep: IMGVR_UViG_3300009506_002638-3300009506-Ga0118657_1006709312__D23-176
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00589.28 best | Phage_integrase | 103.7 | 1.40e-29 | 99.4% | 92.4% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a8eA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.93 | 81.0 | 7.64e-01 | 89.7% | 81.6% |
| 5jk0B01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.89 | 84.0 | 8.09e-01 | 99.4% | 99.4% |
| 3nkhA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.89 | 85.0 | 7.36e-01 | 100.0% | 90.5% |
| 2a3vA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.88 | 85.0 | 7.49e-01 | 100.0% | 93.8% |
| 1aihA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.86 | 78.0 | 7.57e-01 | 100.0% | 85.9% |
| 1f44A01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.86 | 81.0 | 7.45e-01 | 100.0% | 95.9% |
| 1ae9A00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.83 | 71.0 | 6.85e-01 | 89.7% | 88.9% |
| 3uxuA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.76 | 59.0 | 5.92e-01 | 91.0% | 79.2% |
| 4dwpA02 | 1.10.443.30 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase | 0.75 | 70.0 | 6.12e-01 | 100.0% | 84.1% |
| 1ixrA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 26.0 | 3.90e-01 | 72.3% | 92.1% |
| 4bs9A01 | 3.90.930.60 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.55 | 31.0 | 3.88e-01 | 99.4% | 89.5% |
| 4rfbA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 26.0 | 3.46e-01 | 72.3% | 88.0% |
| 2jmcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 23.0 | 3.02e-01 | 74.2% | 74.0% |
| 7pluA01 | 1.20.58.530 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 25.0 | 2.86e-01 | 88.4% | 60.2% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4181053 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.93 | 90.0 | 8.07e-01 | 100.0% | 89.5% |
| 4994277 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.93 | 89.0 | 8.41e-01 | 100.0% | 91.1% |
| 5083506 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.92 | 89.0 | 8.29e-01 | 100.0% | 92.4% |
| 4475168 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.91 | 87.0 | 7.96e-01 | 100.0% | 88.7% |
| 4637388 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.91 | 86.0 | 8.32e-01 | 100.0% | 89.4% |
| 5059725 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.90 | 87.0 | 8.18e-01 | 100.0% | 90.0% |
| 4981577 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.90 | 64.0 | 7.11e-01 | 71.6% | 93.6% |
| 4004483 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.90 | 87.0 | 7.99e-01 | 100.0% | 89.5% |
| 5016957 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.90 | 83.0 | 7.88e-01 | 95.5% | 98.3% |
| 4940211 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.90 | 85.0 | 8.25e-01 | 98.7% | 97.1% |
| 4007744 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.90 | 86.0 | 7.67e-01 | 100.0% | 95.1% |
| 4929009 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.89 | 62.0 | 6.83e-01 | 71.0% | 95.4% |
| 4969226 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.89 | 64.0 | 6.86e-01 | 72.9% | 98.5% |
| 4997941 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.89 | 79.0 | 7.01e-01 | 92.3% | 83.3% |
| 5028306 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.89 | 86.0 | 8.07e-01 | 100.0% | 92.8% |
| 4952765 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.89 | 63.0 | 6.67e-01 | 72.3% | 92.1% |
| 4964439 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.89 | 85.0 | 7.46e-01 | 100.0% | 91.6% |
| 5052541 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.89 | 63.0 | 6.99e-01 | 72.3% | 96.8% |
| 4966027 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.89 | 85.0 | 7.94e-01 | 100.0% | 92.9% |
| 4981966 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.88 | 85.0 | 7.64e-01 | 100.0% | 89.0% |
| 4428937 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.88 | 62.0 | 7.07e-01 | 71.6% | 97.5% |
| 5030401 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.88 | 62.0 | 6.64e-01 | 71.6% | 90.4% |
| 4998614 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.88 | 77.0 | 6.85e-01 | 91.6% | 87.1% |
| 5002702 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.87 | 83.0 | 7.70e-01 | 100.0% | 87.9% |
| 4999472 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.87 | 77.0 | 7.15e-01 | 92.3% | 87.4% |
| 4032881 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.87 | 61.0 | 6.59e-01 | 71.6% | 91.9% |
| 3586881 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.87 | 61.0 | 6.26e-01 | 71.6% | 95.3% |
| 4954527 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.87 | 76.0 | 6.66e-01 | 91.6% | 78.2% |
| 4183457 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.87 | 76.0 | 7.92e-01 | 93.5% | 97.9% |
| 4021119 | 101.1.8.7 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › NDC10_II | 0.86 | 76.0 | 5.74e-01 | 91.6% | 60.3% |
| 5076857 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 83.0 | 7.92e-01 | 100.0% | 90.9% |
| 4936284 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 60.0 | 7.02e-01 | 71.0% | 95.7% |
| 3271483 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 80.0 | 7.41e-01 | 97.4% | 95.8% |
| 5061203 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 82.0 | 7.54e-01 | 100.0% | 89.5% |
| 4973226 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 63.0 | 7.13e-01 | 74.2% | 96.7% |
| 4965845 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 82.0 | 7.59e-01 | 100.0% | 95.3% |
| 3946063 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 76.0 | 6.96e-01 | 92.3% | 81.5% |
| 5000880 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 82.0 | 7.70e-01 | 100.0% | 90.0% |
| 4961786 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.85 | 60.0 | 6.17e-01 | 72.3% | 93.3% |
| 4392937 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.85 | 77.0 | 7.72e-01 | 95.5% | 94.8% |
| 5031467 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.84 | 74.0 | 6.70e-01 | 91.6% | 82.0% |
| 4954640 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.84 | 74.0 | 6.75e-01 | 91.6% | 85.4% |
| 4979786 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.84 | 60.0 | 6.76e-01 | 72.3% | 95.0% |
| 4122043 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 57.0 | 6.48e-01 | 71.0% | 96.7% |
| 3975337 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 57.0 | 6.14e-01 | 71.6% | 96.3% |
| 3983469 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 58.0 | 6.41e-01 | 72.9% | 94.4% |
| 4007467 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 76.0 | 6.63e-01 | 98.7% | 91.8% |
| 3978568 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 56.0 | 6.03e-01 | 71.0% | 95.6% |
| 3943931 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 54.0 | 6.30e-01 | 73.5% | 92.2% |
| 3945675 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 58.0 | 6.11e-01 | 73.5% | 94.3% |
| 3964171 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 76.0 | 7.28e-01 | 100.0% | 92.5% |
| 3964657 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 75.0 | 6.88e-01 | 100.0% | 89.7% |
| 4947440 | 101.1.8.26 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Ribosomal_L32p | 0.79 | 62.0 | 6.60e-01 | 100.0% | 92.6% |
| 5008464 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 74.0 | 6.90e-01 | 100.0% | 91.9% |
| 3979114 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 61.0 | 6.61e-01 | 85.8% | 96.2% |
| 3965072 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.77 | 54.0 | 5.87e-01 | 71.0% | 95.4% |
| 4182686 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.77 | 72.0 | 6.65e-01 | 100.0% | 93.8% |
| 4004713 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.72 | 57.0 | 6.10e-01 | 81.9% | 94.8% |
| 3941922 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 27.0 | 4.55e-01 | 86.5% | 100.0% |
| 3972891 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.69 | 44.0 | 5.44e-01 | 92.9% | 100.0% |
| 4281782 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.65 | 29.0 | 4.27e-01 | 100.0% | 90.7% |
| 3968456 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.63 | 41.0 | 4.82e-01 | 92.9% | 95.4% |
| 4138994 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.59 | 27.0 | 3.86e-01 | 72.3% | 94.3% |
| 3906493 | 2.1.1.142 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HROB | 0.57 | 28.0 | 3.03e-01 | 72.9% | 53.1% |