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IMGVR_UViG_3300004069_000063-3300004069-Ga0063354_10012985
Arc-VirIMGVR_UViG_3300004069_000063-3300004069-Ga0063354_10012985
Identity
- Kingdom:
- archaea
Quality
80.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-124
Domain cluster:
rep: ON041214.1__UOL51140.1__X__00056__D24-162
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qlzA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 42.0 | 5.50e-01 | 80.3% | 100.0% |
| 2nriB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 49.0 | 5.46e-01 | 95.7% | 84.8% |
| 2ethA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 49.0 | 4.58e-01 | 70.9% | 61.0% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 42.0 | 5.11e-01 | 88.0% | 93.3% |
| 3cuqA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 45.0 | 5.29e-01 | 94.0% | 96.2% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 44.0 | 4.00e-01 | 70.9% | 49.7% |
| 4i98C01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 42.0 | 5.15e-01 | 88.0% | 98.7% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 44.0 | 4.35e-01 | 71.8% | 62.1% |
| 1s6lA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 32.0 | 4.47e-01 | 78.6% | 100.0% |
| 3mq0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 40.0 | 4.68e-01 | 90.6% | 97.4% |
| 3w6kC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 43.0 | 4.93e-01 | 81.2% | 96.6% |
| 3tqnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 36.0 | 4.34e-01 | 82.1% | 93.2% |
| 2a5yC03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 46.0 | 4.78e-01 | 80.3% | 90.1% |
| 5c17A00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.59 | 54.0 | 4.46e-01 | 99.1% | 80.1% |
| 1b9mB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 39.0 | 4.19e-01 | 71.8% | 78.8% |
| 3r0aA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 46.0 | 4.64e-01 | 99.1% | 85.0% |
| 3f2gA00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.56 | 51.0 | 4.19e-01 | 99.1% | 77.1% |
| 1iqzA00 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 32.0 | 3.64e-01 | 86.3% | 86.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5048315 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 44.0 | 4.22e-01 | 89.7% | 50.8% |
| 3783752 | 101.1.2.33 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_beta | 0.76 | 40.0 | 5.15e-01 | 85.5% | 92.3% |
| 5012709 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 47.0 | 3.74e-01 | 100.0% | 32.3% |
| 4598188 | 101.1.2.242 ↗ | alpha arrays › HTH › HTH › winged helix domain › RepL | 0.69 | 55.0 | 5.53e-01 | 94.9% | 81.7% |
| 5018202 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 46.0 | 4.69e-01 | 70.9% | 70.4% |
| 4004380 | 101.1.2.89 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR | 0.67 | 43.0 | 4.35e-01 | 88.9% | 65.2% |
| 3445213 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.65 | 50.0 | 4.73e-01 | 82.1% | 93.6% |
| 3266668 | 101.1.2.69 ↗ | alpha arrays › HTH › HTH › winged helix domain › La | 0.64 | 45.0 | 4.79e-01 | 71.8% | 85.0% |
| 5056718 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.63 | 49.0 | 4.89e-01 | 99.1% | 81.4% |
| 4017089 | 101.1.2.519 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7791 | 0.62 | 43.0 | 4.33e-01 | 70.9% | 91.7% |
| 5027661 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.62 | 48.0 | 4.90e-01 | 99.1% | 82.6% |
| 5031624 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.62 | 42.0 | 4.74e-01 | 93.2% | 91.1% |
| 4529868 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 46.0 | 5.09e-01 | 79.5% | 97.9% |
| 4139293 | 101.1.2.546 ↗ | alpha arrays › HTH › HTH › winged helix domain › Methyltransf_2 | 0.61 | 42.0 | 2.88e-01 | 70.1% | 26.7% |
| 4410528 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 46.0 | 3.90e-01 | 91.5% | 61.6% |
D2
high
residues 181-272
Domain cluster:
rep: MT889387.1__QOP66219.1__SEA_DANIELLEIGNACE_79__00079__D9-80
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4krdB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.69 | 55.0 | 4.32e-01 | 84.8% | 60.0% |
| 1t9kA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.68 | 47.0 | 4.09e-01 | 71.7% | 93.6% |
| 2xzmG00 | 1.10.455.10 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 | 0.67 | 51.0 | 4.04e-01 | 81.5% | 60.9% |
| 1r6bX03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 44.0 | 4.56e-01 | 80.4% | 75.0% |
| 2o5rA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.64 | 33.0 | 4.22e-01 | 75.0% | 91.7% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 36.0 | 3.29e-01 | 92.4% | 45.0% |
| 5nx5B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.59 | 47.0 | 3.30e-01 | 84.8% | 46.6% |
| 4o6yB00 | 1.20.120.1770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.57 | 42.0 | 3.18e-01 | 76.1% | 51.7% |
| 2dkwA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.55 | 43.0 | 3.76e-01 | 81.5% | 63.4% |
| 1s35A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 40.0 | 3.76e-01 | 78.3% | 98.2% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.51 | 39.0 | 3.75e-01 | 78.3% | 99.0% |
| 3f6tA02 | 1.10.20.110 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.51 | 35.0 | 3.04e-01 | 70.7% | 64.6% |
| 3qhbA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 44.0 | 3.57e-01 | 97.8% | 59.2% |
| 7r8bB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 44.0 | 3.18e-01 | 100.0% | 57.9% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4026470 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.68 | 53.0 | 4.48e-01 | 83.7% | 77.8% |
| 3498294 | 148.1.3.40 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ORC5_lid | 0.68 | 45.0 | 4.30e-01 | 83.7% | 59.0% |
| 3219743 | 7060.1.1.1 ↗ | alpha arrays › ELMO domain › ELMO domain › ELMO domain › ELMO_CED12 | 0.65 | 53.0 | 4.21e-01 | 91.3% | 50.8% |
| 4025236 | 192.29.1.171 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Sas10_Utp3 | 0.63 | 36.0 | 3.11e-01 | 88.0% | 38.5% |
| 4022703 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.62 | 45.0 | 4.54e-01 | 77.2% | 97.9% |
| 3399076 | 150.1.1.94 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Sas10_Utp3 | 0.61 | 33.0 | 3.03e-01 | 90.2% | 38.3% |
| 3240465 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.58 | 42.0 | 3.82e-01 | 75.0% | 88.3% |
| 4085606 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.56 | 41.0 | 3.87e-01 | 77.2% | 100.0% |
| 2323994 | 604.37.1.0 ↗ | alpha bundles › Spectrin repeat-like › Legionella effector Lem22 › Legionella effector Lem22 | 0.54 | 38.0 | 3.92e-01 | 73.9% | 96.7% |
| 4947622 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.53 | 39.0 | 3.41e-01 | 77.2% | 76.3% |
| 3448422 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.52 | 41.0 | 3.28e-01 | 85.9% | 43.7% |
| 3358973 | 2004.1.1.71 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IPPT | 0.51 | 43.0 | 3.28e-01 | 100.0% | 41.5% |