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IMGVR_UViG_3300004109_000154-3300004109-Ga0008650_100095617

Arc-Vir

IMGVR_UViG_3300004109_000154-3300004109-Ga0008650_100095617

Quality

97.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-51_95-193
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF02775.27 best TPP_enzyme_C 34.7 2.10e-08 99.2% 64.9%
PF00456.27 Transketolase_N 29.7 4.80e-07 88.0% 16.2%
CATH (89)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3rimB01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.94 91.0 6.17e-01 100.0% 63.5%
3l84A01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.93 90.0 6.27e-01 100.0% 66.6%
3ooyA01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.93 90.0 6.41e-01 100.0% 70.8%
1l8aA01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.91 87.0 5.75e-01 100.0% 70.6%
1v11A00 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.89 82.0 5.55e-01 96.6% 52.7%
1ni4A00 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.86 82.0 5.58e-01 100.0% 58.3%
6lpiD03 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.85 75.0 6.48e-01 91.5% 97.6%
2pgnA03 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.81 76.0 6.03e-01 100.0% 81.2%
1um9A00 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.79 73.0 5.07e-01 96.6% 56.8%
2o1sC01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.77 74.0 5.70e-01 100.0% 73.7%
3ibsA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.69 59.0 4.88e-01 93.2% 76.2%
4dadA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 51.0 4.99e-01 95.7% 71.9%
6qrjA03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 47.0 4.83e-01 93.2% 75.2%
1dbqA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 49.0 4.67e-01 96.6% 64.9%
4fx5A02 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.67 59.0 5.09e-01 96.6% 77.7%
4g56A01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.67 59.0 4.49e-01 97.4% 80.9%
4yo7A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 47.0 4.55e-01 92.3% 64.6%
1eucB03 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.66 53.0 5.00e-01 92.3% 70.5%
3jteA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 48.0 4.75e-01 93.2% 71.4%
6ekgY00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 49.0 4.86e-01 95.7% 75.2%
3a0uA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 46.0 4.71e-01 93.2% 74.8%
3cb2B01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.65 58.0 4.51e-01 100.0% 77.4%
2rjoA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 50.0 4.62e-01 93.2% 63.8%
5dqpB00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.65 55.0 3.83e-01 94.0% 75.9%
3v3tA01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.65 54.0 4.52e-01 90.6% 79.5%
2qw5A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.65 57.0 4.23e-01 100.0% 81.3%
2btoA01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.65 58.0 4.51e-01 100.0% 78.6%
7d88A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 57.0 4.12e-01 100.0% 64.6%
4xltA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 50.0 4.86e-01 93.2% 75.0%
3raoB00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.64 54.0 3.87e-01 91.5% 54.4%
3a2bA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.64 57.0 4.55e-01 98.3% 69.8%
5c54G00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 58.0 4.28e-01 100.0% 82.7%
4pmxA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 57.0 4.24e-01 100.0% 86.3%
3h5iA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 46.0 4.59e-01 95.7% 72.0%
1b30A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 56.0 4.23e-01 100.0% 77.4%
2hk0A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.63 56.0 4.28e-01 100.0% 79.2%
7u7hA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.63 56.0 4.52e-01 97.4% 62.3%
6i3mE02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.63 42.0 3.54e-01 76.1% 39.5%
3aptA00 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.63 53.0 4.07e-01 95.7% 72.9%
1pyfA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.62 54.0 4.00e-01 95.7% 50.8%
2dskA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.62 55.0 4.15e-01 100.0% 85.3%
8jj7A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 56.0 4.16e-01 100.0% 68.6%
7v58A01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.62 55.0 4.38e-01 97.4% 58.1%
7yiyA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.62 55.0 4.36e-01 98.3% 71.3%
3ndoA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 53.0 4.35e-01 95.7% 81.8%
2zayA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 45.0 4.51e-01 94.0% 73.2%
2vxoA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 45.0 3.62e-01 75.2% 41.2%
1rqeA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 52.0 3.98e-01 94.0% 52.1%
6lr1A00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.61 53.0 3.59e-01 95.7% 73.6%
4jc0A03 3.30.750.200 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.61 45.0 4.52e-01 77.8% 94.2%
2qs7A00 3.40.1260.10 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like 0.61 48.0 4.59e-01 84.6% 89.1%
2xkbL00 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.61 54.0 3.81e-01 99.1% 56.2%
1fdrA02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.60 42.0 3.88e-01 88.0% 54.6%
2jk1A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 44.0 4.20e-01 95.7% 65.2%
3ewmA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.60 53.0 3.91e-01 96.6% 68.8%
6fnuA00 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.60 53.0 4.02e-01 100.0% 67.2%
3msyA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.60 50.0 4.04e-01 92.3% 60.8%
2aamC00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.60 53.0 4.03e-01 100.0% 89.9%
4mixA00 3.90.550.20 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › 0.60 41.0 3.15e-01 95.7% 30.1%
5ot1A02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.60 52.0 3.73e-01 97.4% 88.2%
3h2gA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 52.0 3.94e-01 95.7% 58.8%
3qw3A01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.60 51.0 4.05e-01 95.7% 75.5%
4wjmA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.59 51.0 3.80e-01 96.6% 68.9%
7lzaA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 43.0 4.31e-01 95.7% 76.3%
3sjnA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.59 50.0 3.91e-01 93.2% 57.5%
3h27A00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.59 47.0 3.24e-01 87.2% 44.1%
1p2fA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 42.0 4.20e-01 95.7% 73.1%
2qtlA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.58 40.0 3.71e-01 86.3% 54.2%
3bm3A00 3.40.91.80 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.58 49.0 3.80e-01 92.3% 54.4%
2ovlA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.58 49.0 3.94e-01 92.3% 62.2%
3g23A02 3.50.30.60 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › LD-carboxypeptidase A C-terminal domain-like 0.58 45.0 4.71e-01 84.6% 94.3%
1a5aA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 48.0 3.81e-01 93.2% 63.5%
4p0tB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 46.0 4.31e-01 88.0% 78.0%
1byiA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 50.0 4.09e-01 97.4% 85.7%
5aunB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 50.0 4.10e-01 97.4% 80.6%
2d6fA03 3.40.50.40 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 49.0 4.69e-01 94.9% 100.0%
1ihuA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 49.0 3.79e-01 98.3% 100.0%
5xd7A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.56 47.0 3.85e-01 94.0% 53.4%
2ekcB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 49.0 3.88e-01 99.1% 64.2%
2vyoA00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.56 48.0 4.07e-01 97.4% 58.7%
2e87A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 47.0 4.07e-01 96.6% 71.3%
1zkdA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 47.0 4.18e-01 94.9% 86.6%
1cqzB01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.55 36.0 3.52e-01 86.3% 58.5%
7va8A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.55 47.0 3.70e-01 96.6% 84.4%
2fliC00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 46.0 3.87e-01 97.4% 90.0%
3hynA00 3.40.50.11200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 42.0 3.71e-01 88.0% 86.6%
4kl0A00 3.90.245.10 Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like 0.51 42.0 3.09e-01 92.3% 50.3%
3ievA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 43.0 3.79e-01 96.6% 76.3%
7ec2A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.50 41.0 3.78e-01 94.0% 68.9%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5068155 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.96 93.0 6.61e-01 100.0% 70.2%
4940981 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.96 93.0 6.54e-01 100.0% 68.1%
None 0.96 93.0 6.76e-01 100.0% 76.3%
None 0.95 92.0 6.34e-01 100.0% 63.9%
3273334 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.95 92.0 6.33e-01 100.0% 66.4%
3948368 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.95 92.0 6.62e-01 100.0% 77.5%
5011975 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.95 92.0 6.69e-01 100.0% 74.8%
4990563 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.95 92.0 6.86e-01 100.0% 82.4%
None 0.95 91.0 6.30e-01 100.0% 65.9%
4109122 7574.1.1.27 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N, Transket_pyr 0.95 91.0 5.68e-01 100.0% 41.1%
3987767 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.94 91.0 6.54e-01 100.0% 73.0%
4518436 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.94 91.0 6.40e-01 100.0% 71.8%
3611572 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.94 91.0 6.26e-01 100.0% 66.4%
3722506 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.94 91.0 6.19e-01 100.0% 65.2%
3601378 7574.1.1.0 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) 0.94 90.0 6.22e-01 100.0% 65.4%
3684749 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.94 90.0 6.12e-01 100.0% 61.7%
4559681 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.94 90.0 6.29e-01 100.0% 68.4%
5013517 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.93 85.0 6.62e-01 94.0% 85.4%
None 0.93 90.0 6.37e-01 100.0% 69.2%
1278206 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.93 89.0 6.27e-01 100.0% 65.8%
4942416 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.92 89.0 6.65e-01 100.0% 82.9%
3287575 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.91 88.0 5.59e-01 100.0% 61.3%
5062441 7574.1.1.12 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › PDH_E1_M 0.91 87.0 5.21e-01 100.0% 41.0%
3972245 7574.1.1.0 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) 0.91 87.0 5.58e-01 100.0% 61.5%
None 0.91 87.0 5.75e-01 100.0% 70.6%
None 0.90 86.0 6.08e-01 100.0% 77.0%
3475170 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.90 64.0 5.60e-01 73.5% 72.7%
None 0.89 85.0 5.99e-01 100.0% 77.5%
3972866 7574.1.1.2 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › E1_dh 0.87 83.0 5.66e-01 100.0% 58.6%
3286832 7574.1.1.2 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › E1_dh 0.86 83.0 5.66e-01 100.0% 58.6%
3961962 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.86 77.0 5.55e-01 94.0% 63.0%
4538977 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.86 81.0 6.14e-01 98.3% 82.4%
5023834 7574.1.1.5 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_C 0.86 77.0 6.83e-01 94.0% 96.2%
10703 7574.1.1.2 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › E1_dh 0.86 82.0 5.56e-01 100.0% 59.7%
4937568 7574.1.1.2 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › E1_dh 0.86 82.0 5.59e-01 100.0% 58.6%
None 0.86 81.0 5.72e-01 100.0% 66.6%
5030396 7574.1.1.5 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_C 0.85 79.0 6.65e-01 97.4% 87.8%
5048752 7574.1.1.5 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_C 0.85 79.0 6.34e-01 97.4% 80.0%
5018663 7574.1.1.5 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_C 0.82 77.0 6.25e-01 99.1% 88.3%
4604729 7574.1.1.5 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_C 0.80 74.0 5.46e-01 100.0% 69.1%
3739463 7574.1.1.0 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) 0.71 64.0 5.15e-01 97.4% 75.0%
2469825 2007.3.1.1 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA 0.70 59.0 4.83e-01 92.3% 60.3%
3225870 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.68 61.0 4.39e-01 100.0% 79.1%
5052354 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.68 61.0 4.98e-01 96.6% 67.6%
3786130 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.68 49.0 4.69e-01 87.2% 64.4%
3841542 2004.1.1.432 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 0.68 56.0 4.98e-01 96.6% 62.4%
3288413 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.68 60.0 5.09e-01 96.6% 74.7%
3742543 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.67 48.0 4.59e-01 87.2% 64.4%
4565817 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.67 47.0 4.41e-01 86.3% 59.0%
4217979 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.66 57.0 4.51e-01 94.9% 62.7%
4983558 2007.1.3.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding 0.66 49.0 4.56e-01 93.2% 62.8%
4029780 2003.1.6.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.65 58.0 4.73e-01 100.0% 85.6%
3705688 2003.1.6.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.65 58.0 4.55e-01 100.0% 85.9%
4882437 2003.1.6.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.65 58.0 4.61e-01 100.0% 83.9%
3760279 2003.1.6.7 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin, Misat_Tub_SegII 0.65 57.0 4.59e-01 100.0% 84.5%
3970135 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.64 55.0 3.96e-01 94.9% 77.2%
4947989 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.64 48.0 4.64e-01 93.2% 70.0%
3761562 2006.1.6.13 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 0.64 55.0 4.85e-01 95.7% 78.9%
4371937 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.63 56.0 4.16e-01 100.0% 79.6%
2834135 2003.1.6.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.63 56.0 4.49e-01 100.0% 83.6%
5011725 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.63 53.0 4.27e-01 91.5% 80.4%
3181222 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.63 46.0 4.11e-01 88.0% 53.9%
4072874 2003.1.6.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.63 56.0 4.59e-01 100.0% 88.0%
3705754 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.63 47.0 4.10e-01 87.2% 50.8%
5000459 2003.1.6.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.62 56.0 4.70e-01 100.0% 78.5%
8704 2002.1.1.13 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.62 54.0 4.00e-01 95.7% 50.8%
4971179 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.62 53.0 3.86e-01 95.7% 56.9%
4987616 2003.1.6.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.62 55.0 4.66e-01 100.0% 79.5%
4396298 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.62 43.0 3.91e-01 76.9% 53.5%
3167345 2002.1.1.90 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTHFR 0.62 55.0 4.05e-01 99.1% 73.0%
4945953 2003.1.6.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.62 55.0 4.63e-01 100.0% 76.6%
5066233 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.62 46.0 3.46e-01 77.8% 96.1%
5024379 2003.1.6.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.62 54.0 3.93e-01 100.0% 44.8%
2574248 2002.1.1.16 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase 0.61 53.0 3.59e-01 95.7% 73.6%
5064842 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.61 53.0 4.17e-01 96.6% 81.6%
4175271 2003.1.6.11 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › TubZ-like_C 0.61 55.0 3.76e-01 100.0% 55.5%
5046789 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.61 51.0 4.48e-01 92.3% 80.6%
3789499 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.61 43.0 3.31e-01 77.8% 32.3%
4987760 2003.1.6.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.60 54.0 4.45e-01 100.0% 83.7%
5017854 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.60 52.0 3.81e-01 96.6% 83.2%
5061836 2003.1.6.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.60 54.0 4.41e-01 100.0% 72.3%
3332189 2007.9.1.1 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR 0.60 52.0 4.87e-01 96.6% 77.2%
3482358 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.60 50.0 4.47e-01 92.3% 88.8%
3600257 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.59 42.0 3.78e-01 80.3% 51.5%
3579750 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.59 51.0 4.06e-01 96.6% 82.9%
5032325 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.59 51.0 4.44e-01 96.6% 69.7%
3930769 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.59 51.0 4.07e-01 96.6% 83.7%
3415138 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.58 49.0 4.03e-01 95.7% 68.9%
4988220 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.57 51.0 4.25e-01 97.4% 81.0%
3596031 7514.1.1.0 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain 0.57 45.0 4.05e-01 84.6% 76.9%
3783048 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.57 49.0 4.10e-01 96.6% 87.3%
5001015 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.57 42.0 3.23e-01 77.8% 32.5%
4010336 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.56 47.0 4.49e-01 90.6% 80.7%
170194 2487.1.1.18 a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › Peptidase_S66C 0.56 48.0 4.75e-01 94.0% 91.0%
4273161 2002.1.1.174 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.56 47.0 3.81e-01 94.0% 51.7%
4953981 2007.2.1.6 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_5 0.56 50.0 4.51e-01 100.0% 76.9%
1921169 2004.1.1.14 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU 0.54 47.0 4.21e-01 96.6% 79.2%
5058414 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.53 47.0 3.45e-01 100.0% 94.6%
D2 medium residues 1-33_194-215
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4k0dA00 1.20.120.1730 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.67 58.0 4.33e-01 100.0% 67.1%
3ckcA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 51.0 3.72e-01 100.0% 58.2%
3a06B03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.56 39.0 3.42e-01 74.5% 81.8%
2i1yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 47.0 2.94e-01 94.5% 20.2%
2v9kA01 1.10.10.2050 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.54 42.0 4.42e-01 89.1% 100.0%
1tzvA00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.54 47.0 3.53e-01 100.0% 62.4%
2nr4A02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.53 44.0 4.38e-01 100.0% 87.9%
8h6rA01 1.20.930.10 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.53 48.0 4.10e-01 100.0% 89.4%
2de2A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.53 46.0 3.19e-01 100.0% 46.4%
2px7A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.52 42.0 2.93e-01 94.5% 75.4%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 4.01e-01 89.1% 100.0%
1l8dA00 1.10.287.510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.51 46.0 3.71e-01 100.0% 78.6%
2ra1A03 1.20.58.770 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 41.0 3.95e-01 90.9% 93.7%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3281418 628.1.1.1 alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD 0.66 55.0 4.19e-01 100.0% 53.8%
3614005 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 56.0 3.57e-01 100.0% 21.5%
5038476 181.1.1.1 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.60 41.0 3.84e-01 72.7% 91.4%
3670388 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 51.0 3.78e-01 96.4% 43.7%
4931635 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.56 49.0 4.31e-01 100.0% 82.1%
3519277 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.56 43.0 4.24e-01 85.5% 98.3%
3927240 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.55 42.0 4.29e-01 87.3% 92.7%
5057164 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 44.0 3.69e-01 94.5% 72.0%
3354354 7515.1.1.0 a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like 0.53 46.0 2.92e-01 100.0% 76.0%
1695198 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.52 44.0 4.09e-01 96.4% 76.8%