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IMGVR_UViG_3300004109_000154-3300004109-Ga0008650_10009567
Arc-VirIMGVR_UViG_3300004109_000154-3300004109-Ga0008650_10009567
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 29-60_138-213
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7fbhB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.74 | 65.0 | 5.04e-01 | 96.3% | 95.8% |
| 3iylW04 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.71 | 61.0 | 4.77e-01 | 94.4% | 95.7% |
| 2uyoA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.69 | 62.0 | 4.57e-01 | 98.1% | 99.3% |
| 2i6gB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 60.0 | 4.85e-01 | 96.3% | 93.5% |
| 3ggdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.67 | 61.0 | 4.66e-01 | 99.1% | 88.1% |
| 4fsdA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 61.0 | 4.65e-01 | 99.1% | 92.8% |
| 3tkaA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 55.0 | 4.60e-01 | 93.5% | 100.0% |
| 1yb2A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 50.0 | 3.86e-01 | 86.1% | 75.2% |
| 1mhmA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.55 | 49.0 | 3.73e-01 | 98.1% | 96.8% |
| 3e7jA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 47.0 | 3.42e-01 | 97.2% | 82.5% |
| 1r89A03 | 3.30.70.590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain | 0.54 | 37.0 | 3.47e-01 | 88.9% | 57.5% |
| 3ldtA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.53 | 38.0 | 3.43e-01 | 73.1% | 88.9% |
| 5xzqF00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 33.0 | 3.45e-01 | 79.6% | 68.0% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 137226 | 2003.1.5.201 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25, Methyltransf_31 | 0.75 | 69.0 | 5.17e-01 | 100.0% | 94.5% |
| 3634551 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.68 | 61.0 | 4.55e-01 | 96.3% | 95.4% |
| 4672357 | 2003.1.5.34 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TehB | 0.68 | 60.0 | 4.84e-01 | 96.3% | 94.0% |
| None | — | 0.67 | 59.0 | 4.87e-01 | 97.2% | 96.4% | |
| 5027530 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.65 | 59.0 | 4.69e-01 | 96.3% | 94.6% |
| 3248910 | 2003.1.5.89 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Anamorsin_N | 0.65 | 59.0 | 4.14e-01 | 98.1% | 71.6% |
| 4281922 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.63 | 57.0 | 4.56e-01 | 99.1% | 96.7% |
| 4515089 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.62 | 56.0 | 4.35e-01 | 100.0% | 93.2% |
| 4098438 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 36.0 | 3.80e-01 | 79.6% | 64.0% |
| 4028387 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.60 | 37.0 | 3.93e-01 | 78.7% | 69.5% |
| 3192610 | 2003.1.5.113 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF3419 | 0.60 | 55.0 | 3.76e-01 | 100.0% | 92.2% |
| 3285209 | 306.2.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor | 0.60 | 35.0 | 4.09e-01 | 82.4% | 83.6% |
| 4049817 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 36.0 | 3.52e-01 | 79.6% | 55.7% |
| 4261090 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.58 | 35.0 | 2.71e-01 | 83.3% | 27.2% |
| 3611915 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.58 | 38.0 | 3.56e-01 | 78.7% | 54.6% |
| 3675944 | 310.3.1.20 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › GATase_2 | 0.56 | 35.0 | 4.16e-01 | 82.4% | 95.7% |
| 3650236 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 34.0 | 3.54e-01 | 80.6% | 66.0% |
| 3223461 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 32.0 | 3.62e-01 | 79.6% | 77.5% |
| 3178234 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.54 | 33.0 | 3.55e-01 | 80.6% | 71.1% |
| 3730042 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.54 | 34.0 | 3.38e-01 | 79.6% | 58.3% |
| 3682517 | 213.1.1.57 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › BCCIP | 0.54 | 47.0 | 3.64e-01 | 98.1% | 91.8% |
| 3470372 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.54 | 32.0 | 3.37e-01 | 79.6% | 63.0% |
| 4964637 | 304.165.1.4 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › HVO_2525_N | 0.53 | 35.0 | 3.15e-01 | 88.0% | 45.0% |
| 4970138 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.52 | 33.0 | 3.39e-01 | 81.5% | 66.7% |
| 3959193 | 2003.1.2.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO | 0.51 | 36.0 | 3.16e-01 | 74.1% | 61.8% |
| 3957946 | 256.1.1.12 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › SOUL | 0.51 | 33.0 | 3.52e-01 | 81.5% | 76.7% |
| 3397881 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.51 | 32.0 | 3.38e-01 | 82.4% | 70.5% |
| 4031688 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.51 | 33.0 | 3.40e-01 | 81.5% | 70.0% |
| 5001641 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.50 | 45.0 | 3.65e-01 | 98.1% | 75.5% |