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IMGVR_UViG_3300004214_000238-3300004214-Ga0066646_100067349
Arc-VirIMGVR_UViG_3300004214_000238-3300004214-Ga0066646_100067349
Identity
- Kingdom:
- archaea
Quality
72.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-66
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ar9A02 | 1.10.390.20 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › | 0.67 | 52.0 | 3.99e-01 | 84.1% | 76.8% |
| 2dbhA01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.63 | 44.0 | 4.12e-01 | 74.6% | 69.6% |
| 1sr2A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.61 | 46.0 | 3.71e-01 | 79.4% | 48.3% |
| 1u00A02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.60 | 47.0 | 4.13e-01 | 87.3% | 65.6% |
| 4k7bA00 | 1.20.120.1740 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sodium ion translocating NADH-quinone reductase subunit C-like | 0.58 | 44.0 | 3.63e-01 | 81.0% | 56.8% |
| 3k1rA01 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.57 | 40.0 | 3.70e-01 | 100.0% | 58.0% |
| 4tq1A03 | 1.10.246.190 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Autophagy protein Apg5, helix rich domain | 0.55 | 41.0 | 4.29e-01 | 98.4% | 89.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4473108 | 3198.1.1.1 ↗ | alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA | 0.79 | 54.0 | 4.30e-01 | 77.8% | 38.3% |
| 3640306 | 2007.2.3.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase3 | 0.76 | 56.0 | 3.60e-01 | 77.8% | 25.3% |
| 3630316 | 3198.1.1.1 ↗ | alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA | 0.74 | 52.0 | 4.28e-01 | 77.8% | 42.7% |
| 3590589 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.66 | 47.0 | 4.14e-01 | 74.6% | 84.4% |
| 3786627 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 49.0 | 2.96e-01 | 100.0% | 14.8% |