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IMGVR_UViG_3300004968_000040-3300004968-Ga0066628_11851207
Arc-VirIMGVR_UViG_3300004968_000040-3300004968-Ga0066628_11851207
Identity
- Kingdom:
- archaea
Quality
66.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-67
D2
medium
residues 68-88_143-177
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8gpsA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.65 | 42.0 | 3.37e-01 | 85.7% | 34.6% |
| 2ouxA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.58 | 41.0 | 3.20e-01 | 91.1% | 33.3% |
| 2j1vA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 45.0 | 3.34e-01 | 87.5% | 68.8% |
| 3vskA01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.55 | 41.0 | 3.13e-01 | 80.4% | 85.0% |
| 3kxrA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 36.0 | 2.84e-01 | 89.3% | 30.2% |
| 6jx5A01 | 3.30.2160.10 | Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain | 0.54 | 41.0 | 3.71e-01 | 82.1% | 81.3% |
| 3w6gA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 42.0 | 3.22e-01 | 91.1% | 60.1% |
| 2bmxB01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 41.0 | 2.99e-01 | 89.3% | 50.6% |
| 4htlA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 30.0 | 2.57e-01 | 89.3% | 30.0% |
| 3l2bA01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.52 | 33.0 | 2.66e-01 | 89.3% | 29.9% |
| 2p9mB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.52 | 35.0 | 2.72e-01 | 92.9% | 31.0% |
| 2yzsA01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.51 | 39.0 | 3.51e-01 | 85.7% | 86.3% |
| 3ia1B00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 39.0 | 2.91e-01 | 83.9% | 52.8% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5055290 | 244.4.1.4 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › PF27537 | 0.62 | 36.0 | 3.40e-01 | 73.2% | 48.5% |
| 4061262 | 3541.1.1.1 ↗ | beta sandwiches › Atg29-Atg31 › Atg29-Atg31 › Atg29-Atg31 › ATG31 | 0.62 | 40.0 | 2.97e-01 | 83.9% | 26.4% |
| 4193894 | 2.9.1.1 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB | 0.60 | 45.0 | 2.72e-01 | 82.1% | 81.7% |
| 4159886 | 3541.1.1.1 ↗ | beta sandwiches › Atg29-Atg31 › Atg29-Atg31 › Atg29-Atg31 › ATG31 | 0.59 | 41.0 | 3.15e-01 | 83.9% | 29.7% |
| 3442291 | 2.9.1.1 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB | 0.56 | 42.0 | 2.50e-01 | 82.1% | 75.4% |
| 3263167 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.56 | 36.0 | 2.75e-01 | 87.5% | 25.7% |
| 3360324 | 2485.1.1.12 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › SCO1-SenC | 0.56 | 43.0 | 3.36e-01 | 87.5% | 84.6% |
| 3702049 | 2485.1.1.12 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › SCO1-SenC | 0.55 | 43.0 | 3.25e-01 | 89.3% | 64.7% |
| 3720466 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.54 | 40.0 | 2.58e-01 | 80.4% | 19.6% |
| 3677092 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.54 | 44.0 | 2.74e-01 | 89.3% | 36.8% |
| 5051298 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.54 | 42.0 | 3.52e-01 | 94.6% | 77.4% |
| 4996799 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.53 | 40.0 | 3.59e-01 | 87.5% | 56.5% |
| 3799664 | 2485.1.1.60 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › 1-cysPrx_C | 0.53 | 40.0 | 3.18e-01 | 87.5% | 39.3% |
| 3932040 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.53 | 37.0 | 3.38e-01 | 76.8% | 58.7% |
| 138941 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.52 | 34.0 | 3.30e-01 | 89.3% | 58.5% |
| 3817650 | 11.2.1.8 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PTEN_C2 | 0.52 | 36.0 | 3.04e-01 | 89.3% | 42.0% |
| 4948416 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.51 | 31.0 | 2.38e-01 | 83.9% | 23.2% |
| 3239118 | 1013.1.1.0 ↗ | beta duplicates or obligate multimers › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain | 0.51 | 35.0 | 2.49e-01 | 75.0% | 78.9% |
| 3355067 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.50 | 38.0 | 3.23e-01 | 87.5% | 73.3% |
D3
medium
residues 89-142