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IMGVR_UViG_3300005095_000540-3300005095-Ga0072504_10167246
Arc-VirIMGVR_UViG_3300005095_000540-3300005095-Ga0072504_10167246
Identity
- Kingdom:
- archaea
Quality
85.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-42
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6yiiA01 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.57 | 42.0 | 2.78e-01 | 100.0% | 29.9% |
| 2w01B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.56 | 42.0 | 2.83e-01 | 100.0% | 67.5% |
| 2x49A02 | 3.40.5.40 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › FHIPEP family, domain 2 | 0.55 | 38.0 | 3.64e-01 | 71.1% | 56.2% |
| 7d4rB01 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.53 | 40.0 | 2.57e-01 | 94.7% | 16.5% |
| 3t69A02 | 3.30.420.310 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain | 0.53 | 38.0 | 2.58e-01 | 100.0% | 92.9% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 2.94e-01 | 100.0% | 49.3% |
| 2sliA03 | 2.40.220.10 | Mainly Beta › Beta Barrel › Intramolecular trans-sialidase; domain 3 › Intramolecular Trans-sialidase; Domain 3 | 0.52 | 36.0 | 2.76e-01 | 76.3% | 65.0% |
| 3thxB04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.51 | 41.0 | 2.95e-01 | 97.4% | 53.1% |
| 3oqgA00 | 3.40.1440.50 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › | 0.51 | 37.0 | 2.47e-01 | 81.6% | 63.1% |
| 3s8zA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 37.0 | 2.29e-01 | 97.4% | 10.8% |
| 1knzA02 | 3.30.70.1610 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 34.0 | 3.16e-01 | 81.6% | 51.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5030180 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.85 | 57.0 | 5.24e-01 | 94.7% | 54.0% |
| 5024735 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.75 | 51.0 | 4.68e-01 | 100.0% | 54.0% |
| 5031154 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.65 | 44.0 | 3.91e-01 | 100.0% | 43.3% |
| 4944882 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 43.0 | 4.00e-01 | 100.0% | 52.0% |
| 3603230 | 304.139.1.1 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › DevR | 0.56 | 38.0 | 2.32e-01 | 78.9% | 34.1% |
| 3689960 | 1.1.2.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RdRP | 0.52 | 35.0 | 2.80e-01 | 71.1% | 93.3% |