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IMGVR_UViG_3300005098_000446-3300005098-Ga0072683_10572931

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300005098_000446-3300005098-Ga0072683_10572931 ↗
Kingdom:: archaea

Quality

47.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-78

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00404.25 best	Dockerin_1	42.0	1.20e-10	77.6%	93.0%

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4uypB00	1.10.1330.10	Mainly Alpha › Orthogonal Bundle › Type 1 dockerin domain › Dockerin domain	0.92	76.0	7.38e-01	86.6%	86.3%
4iu3B02	1.10.1330.10	Mainly Alpha › Orthogonal Bundle › Type 1 dockerin domain › Dockerin domain	0.89	70.0	5.59e-01	82.1%	79.0%
2cclB00	1.10.1330.10	Mainly Alpha › Orthogonal Bundle › Type 1 dockerin domain › Dockerin domain	0.87	70.0	7.24e-01	85.1%	96.8%
5lxvB00	1.10.1330.10	Mainly Alpha › Orthogonal Bundle › Type 1 dockerin domain › Dockerin domain	0.86	68.0	6.91e-01	83.6%	86.2%
6kg9A00	1.10.1330.10	Mainly Alpha › Orthogonal Bundle › Type 1 dockerin domain › Dockerin domain	0.84	70.0	7.03e-01	89.6%	95.5%
2vn6B00	1.10.1330.10	Mainly Alpha › Orthogonal Bundle › Type 1 dockerin domain › Dockerin domain	0.82	66.0	6.71e-01	86.6%	90.6%
2oznB02	1.10.1330.10	Mainly Alpha › Orthogonal Bundle › Type 1 dockerin domain › Dockerin domain	0.79	57.0	6.33e-01	80.6%	100.0%
1ykhA00	6.10.140.200	Special › Helix non-globular › Helix Hairpins ›	0.59	39.0	3.51e-01	71.6%	47.4%
1zc6A02	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.58	40.0	3.14e-01	73.1%	35.9%
7w5gA01	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.51	41.0	2.75e-01	97.0%	34.9%
2e4tA02	3.20.20.80	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases	0.51	37.0	2.34e-01	79.1%	17.5%
3e3rB01	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.50	38.0	3.60e-01	85.1%	100.0%
3psfA02	1.10.10.650	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RuvA domain 2-like	0.50	40.0	3.22e-01	91.0%	56.9%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1546664	108.1.2.1 ↗	alpha arrays › EF-hand › EF-hand-related › Type I dockerin domain › Dockerin_1	0.92	76.0	7.38e-01	86.6%	86.3%
2981145	108.1.2.1 ↗	alpha arrays › EF-hand › EF-hand-related › Type I dockerin domain › Dockerin_1	0.92	75.0	6.83e-01	85.1%	77.4%
None	—		0.88	70.0	7.17e-01	85.1%	92.3%
1892011	108.1.2.1 ↗	alpha arrays › EF-hand › EF-hand-related › Type I dockerin domain › Dockerin_1	0.86	68.0	6.91e-01	83.6%	86.2%
None	—		0.57	48.0	2.99e-01	100.0%	72.7%
3497015	102.1.3.0 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain	0.56	47.0	4.01e-01	95.5%	90.3%
4392311	101.35.1.1 ↗	alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2	0.56	35.0	4.08e-01	82.1%	95.6%
3641884	108.1.1.97 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7	0.54	46.0	4.09e-01	100.0%	98.1%
4523250	108.1.1.74 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7+EF-hand_8	0.52	41.0	3.75e-01	86.6%	67.8%
4576399	108.1.1.29 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7	0.52	41.0	3.82e-01	86.6%	71.8%
4170809	108.1.1.73 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7	0.51	41.0	3.74e-01	86.6%	67.8%
3525072	132.1.1.1 ↗	alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding	0.50	36.0	3.37e-01	77.6%	100.0%

D2 medium residues 102-184

PDB