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IMGVR_UViG_3300005099_000002-3300005099-Ga0072682_10056715

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300005099_000002-3300005099-Ga0072682_10056715 ↗
Kingdom:: archaea

Quality

85.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-39

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1sq2N00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.61	47.0	3.54e-01	94.6%	81.2%
3p2aA01	2.30.30.380	Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24	0.54	38.0	3.85e-01	97.3%	91.7%
6z9cA01	2.60.40.1470	Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain	0.53	42.0	3.09e-01	100.0%	41.8%
1gh9A00	3.90.820.10	Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id	0.52	40.0	3.47e-01	100.0%	56.3%
1u2zA01	1.10.260.170	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) ›	0.51	40.0	2.67e-01	100.0%	40.7%

ECOD (15)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5044292	375.11.1.0 ↗	few secondary structure elements › Rubredoxin-like › Zinc-binding domain in CopZ › Zinc-binding domain in CopZ	0.79	61.0	5.06e-01	100.0%	49.2%
4971115	2002.4.1.2 ↗	a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › QRPTase_C	0.77	59.0	3.48e-01	100.0%	10.9%
5033270	375.1.2.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Desulforedoxin	0.77	57.0	5.90e-01	100.0%	85.7%
5044566	375.12.1.0 ↗	few secondary structure elements › Rubredoxin-like › Nicotinate phosphoribosyltransferase C-terminal domain-related › Nicotinate phosphoribosyltransferase C-terminal domain-related	0.75	57.0	4.70e-01	100.0%	45.7%
4325327	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.66	47.0	4.83e-01	100.0%	88.6%
3894725	12.5.1.0 ↗	beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related	0.62	44.0	3.09e-01	81.1%	45.9%
3489248	375.1.1.45 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Mcm10	0.61	45.0	4.52e-01	100.0%	82.5%
3480424	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.61	45.0	4.53e-01	100.0%	82.5%
3235447	821.1.1.8 ↗	a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › ANKLE2_3rd	0.57	46.0	3.61e-01	100.0%	43.3%
3227441	375.10.1.0 ↗	few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha	0.54	45.0	3.91e-01	97.3%	81.7%
3595896	3529.1.1.0 ↗	beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain	0.54	39.0	3.84e-01	100.0%	75.6%
3620613	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.52	40.0	3.80e-01	97.3%	73.3%
3263950	11.1.1.843 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034	0.52	40.0	2.93e-01	100.0%	72.6%
3291109	11.13.1.3 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Leukocidin-like › Leukocidin-like › MspA	0.51	35.0	2.66e-01	100.0%	97.4%
3600630	3529.1.1.0 ↗	beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain	0.50	38.0	3.31e-01	100.0%	93.3%