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IMGVR_UViG_3300005099_000002-3300005099-Ga0072682_10056728
Arc-VirIMGVR_UViG_3300005099_000002-3300005099-Ga0072682_10056728
Identity
- Kingdom:
- archaea
Quality
77.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-79
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d0wA00 | 1.10.760.20 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Protein of unknown function DUF3243 | 0.56 | 38.0 | 3.62e-01 | 100.0% | 59.3% |
| 2vq2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 40.0 | 2.88e-01 | 77.8% | 47.3% |
| 16vpA00 | 1.10.1290.10 | Mainly Alpha › Orthogonal Bundle › Conserved core of transcriptional regulatory protein vp16 › Alpha trans-inducing (Alpha-TIF) | 0.54 | 41.0 | 2.82e-01 | 86.1% | 83.0% |
| 1orqC01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 37.0 | 2.71e-01 | 72.2% | 84.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4945590 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.67 | 43.0 | 4.74e-01 | 90.3% | 85.5% |
| 3421207 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.67 | 31.0 | 3.69e-01 | 87.5% | 64.0% |
| 4941755 | 101.18.1.0 ↗ | alpha arrays › HTH › DNA-binding domain of TraM protein › DNA-binding domain of TraM protein | 0.62 | 49.0 | 4.68e-01 | 94.4% | 74.1% |