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IMGVR_UViG_3300005099_000063-3300005099-Ga0072682_11797948
Arc-VirIMGVR_UViG_3300005099_000063-3300005099-Ga0072682_11797948
Identity
- Kingdom:
- archaea
Quality
73.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-94
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gg6A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.66 | 50.0 | 3.98e-01 | 82.6% | 61.1% |
| 2w4eA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.64 | 47.0 | 3.78e-01 | 78.3% | 63.5% |
| 4lniJ01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.63 | 50.0 | 4.52e-01 | 92.8% | 88.5% |
| 3ng0A01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.62 | 50.0 | 4.46e-01 | 91.3% | 87.4% |
| 5zliA01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.62 | 50.0 | 4.43e-01 | 92.8% | 85.8% |
| 3e57A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.61 | 52.0 | 3.98e-01 | 100.0% | 66.7% |
| 6ixyA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 43.0 | 3.53e-01 | 75.4% | 100.0% |
| 3h95A01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.61 | 44.0 | 3.61e-01 | 78.3% | 61.8% |
| 2a8pA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.60 | 51.0 | 3.75e-01 | 98.6% | 87.0% |
| 4dywA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.59 | 42.0 | 3.52e-01 | 76.8% | 66.7% |
| 6dddH00 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.58 | 48.0 | 4.37e-01 | 91.3% | 100.0% |
| 4m8mA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 42.0 | 3.53e-01 | 78.3% | 81.5% |
| 3vqiD03 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 42.0 | 4.09e-01 | 78.3% | 100.0% |
| 4melA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 45.0 | 4.15e-01 | 91.3% | 88.3% |
| 2bw2A01 | 3.10.20.420 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain | 0.56 | 41.0 | 4.52e-01 | 78.3% | 98.2% |
| 4dx8J01 | 3.30.70.2240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › KRIT, N-terminal Nudix domain, NPxY motif-rich region | 0.54 | 37.0 | 3.39e-01 | 73.9% | 54.4% |
| 6scxC01 | 3.90.79.20 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › | 0.54 | 46.0 | 3.57e-01 | 100.0% | 49.4% |
| 3tssA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 46.0 | 4.57e-01 | 92.8% | 98.6% |
| 1dfuP00 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.53 | 43.0 | 3.95e-01 | 92.8% | 100.0% |
| 2id0A02 | 2.40.50.640 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 45.0 | 4.52e-01 | 100.0% | 94.5% |
| 1eu3A02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 44.0 | 4.22e-01 | 95.7% | 93.8% |
| 6k93A00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.52 | 46.0 | 3.17e-01 | 100.0% | 33.9% |
| 4dbgA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 39.0 | 3.81e-01 | 87.0% | 91.5% |
| 1a3zA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.51 | 39.0 | 3.08e-01 | 84.1% | 82.7% |
| 5uayA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.51 | 42.0 | 4.08e-01 | 100.0% | 100.0% |
| 4m0wA01 | 3.10.20.540 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Papain-like viral protease, N-terminal domain | 0.50 | 34.0 | 3.67e-01 | 72.5% | 94.6% |
| 4qkyA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.50 | 35.0 | 3.47e-01 | 75.4% | 97.3% |
| 2lueA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 35.0 | 3.07e-01 | 76.8% | 73.1% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4133361 | 221.2.1.2 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › mIF3 | 0.69 | 56.0 | 5.05e-01 | 91.3% | 68.4% |
| 3517966 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.64 | 46.0 | 3.84e-01 | 76.8% | 72.0% |
| 3703520 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.64 | 46.0 | 4.16e-01 | 76.8% | 95.8% |
| 4344731 | 221.2.1.2 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › mIF3 | 0.63 | 51.0 | 4.77e-01 | 92.8% | 75.6% |
| 2702147 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.62 | 50.0 | 4.61e-01 | 91.3% | 94.5% |
| 4578080 | 221.2.1.2 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › mIF3 | 0.62 | 50.0 | 4.65e-01 | 92.8% | 75.6% |
| 3594091 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.62 | 45.0 | 3.90e-01 | 78.3% | 96.4% |
| 3891585 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.61 | 49.0 | 4.30e-01 | 91.3% | 90.9% |
| 3973350 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.61 | 48.0 | 4.24e-01 | 89.9% | 91.8% |
| 3230448 | 243.1.1.82 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26529 | 0.61 | 52.0 | 4.11e-01 | 100.0% | 83.2% |
| 4259249 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.59 | 49.0 | 4.45e-01 | 94.2% | 98.9% |
| 4179040 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.58 | 43.0 | 3.87e-01 | 79.7% | 90.0% |
| 3320903 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 53.0 | 4.64e-01 | 100.0% | 78.0% |
| 3551009 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.58 | 49.0 | 3.57e-01 | 98.6% | 47.9% |
| 4312484 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.57 | 48.0 | 4.19e-01 | 94.2% | 95.2% |
| 4452640 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.56 | 48.0 | 4.31e-01 | 94.2% | 95.8% |
| 4459724 | 221.9.1.1 ↗ | a+b two layers › beta-Grasp › N-terminal domain of bypass of forespore C, BofC › N-terminal domain of bypass of forespore C, BofC › BOFC_N | 0.56 | 41.0 | 4.29e-01 | 78.3% | 83.1% |
| 4020877 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.56 | 44.0 | 3.96e-01 | 91.3% | 93.3% |
| 3553354 | 2.1.1.87 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB | 0.55 | 48.0 | 4.56e-01 | 100.0% | 87.1% |
| 3183474 | 221.3.1.0 ↗ | a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains | 0.55 | 38.0 | 3.96e-01 | 75.4% | 96.9% |
| 4404320 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.54 | 40.0 | 3.72e-01 | 79.7% | 94.4% |
| 3387584 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.54 | 38.0 | 3.70e-01 | 76.8% | 100.0% |
| 3169613 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 47.0 | 4.20e-01 | 100.0% | 75.0% |
| 404 | 2.2.1.1 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Stap_Strp_toxin | 0.53 | 45.0 | 4.08e-01 | 97.1% | 81.4% |
| 5000847 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.52 | 37.0 | 3.88e-01 | 75.4% | 93.8% |
| 4927437 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 46.0 | 4.62e-01 | 100.0% | 97.1% |
| 3245865 | 63.1.1.3 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH | 0.51 | 42.0 | 3.34e-01 | 92.8% | 80.7% |
| 4927976 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.50 | 41.0 | 3.53e-01 | 97.1% | 92.0% |
| 3742860 | 63.1.1.3 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH | 0.50 | 42.0 | 3.30e-01 | 92.8% | 84.1% |