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IMGVR_UViG_3300005099_000063-3300005099-Ga0072682_1179799
Arc-VirIMGVR_UViG_3300005099_000063-3300005099-Ga0072682_1179799
Identity
- Kingdom:
- archaea
Quality
76.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-54
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hinA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.67 | 44.0 | 4.42e-01 | 77.8% | 65.5% |
| 1iurA01 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.65 | 56.0 | 5.38e-01 | 100.0% | 93.7% |
| 2jnsA01 | 1.20.1270.220 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.61 | 47.0 | 4.14e-01 | 87.0% | 56.8% |
| 2ds2D01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.60 | 51.0 | 5.03e-01 | 98.1% | 100.0% |
| 2xv9A00 | 1.10.533.30 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Nematode polyprotein allergen ABA-1 | 0.60 | 49.0 | 3.77e-01 | 94.4% | 94.8% |
| 2vgxB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 46.0 | 3.42e-01 | 87.0% | 71.0% |
| 2i5hA02 | 1.10.150.280 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AF1531-like domain | 0.55 | 39.0 | 3.39e-01 | 79.6% | 100.0% |
| 3ctwB00 | 1.10.8.930 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Protein of unknown function DUF1465 | 0.52 | 44.0 | 3.43e-01 | 96.3% | 50.8% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 41.0 | 3.70e-01 | 94.4% | 87.7% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3812397 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.75 | 59.0 | 3.74e-01 | 100.0% | 18.0% |
| 5066519 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.71 | 60.0 | 6.02e-01 | 100.0% | 94.5% |
| 3217119 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.70 | 60.0 | 3.71e-01 | 98.1% | 32.3% |
| 4567966 | 109.4.1.2402 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27584, PF27595, PF27648, PF30849 | 0.69 | 59.0 | 3.20e-01 | 96.3% | 5.3% |
| 3825925 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.69 | 62.0 | 4.41e-01 | 100.0% | 43.9% |
| 3321805 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.69 | 48.0 | 3.04e-01 | 85.2% | 13.9% |
| 5034422 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.68 | 57.0 | 5.72e-01 | 92.6% | 98.2% |
| 3399894 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 46.0 | 3.29e-01 | 83.3% | 22.9% |
| 4468502 | 192.11.1.1 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR | 0.66 | 55.0 | 5.43e-01 | 100.0% | 98.3% |
| 5081693 | 304.160.1.1 ↗ | a+b two layers › Alpha-beta plaits › Gas vesicle protein GvpF › Gas vesicle protein GvpF › GvpL_GvpF | 0.66 | 45.0 | 3.43e-01 | 74.1% | 73.4% |