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IMGVR_UViG_3300005099_000065-3300005099-Ga0072682_1197972
Arc-VirIMGVR_UViG_3300005099_000065-3300005099-Ga0072682_1197972
Identity
- Kingdom:
- archaea
Quality
89.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-25_105-264
Domain cluster:
rep: NC_074638__YP_010772040.1__QIT35-gp50__00050__D49-148_161-281
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6v04A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.63 | 30.0 | 3.64e-01 | 96.1% | 66.9% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.60 | 25.0 | 3.91e-01 | 83.4% | 97.2% |
| 2eenA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.55 | 47.0 | 4.77e-01 | 97.2% | 91.5% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.52 | 28.0 | 3.52e-01 | 79.6% | 85.3% |
| 2c4iA01 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.50 | 32.0 | 3.95e-01 | 75.1% | 100.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 998899 | 58.2.1.1 ↗ | beta barrels › Oncogene product-like › LigD phosphoesterase domain › LigD phosphoesterase domain › LigD_N | 0.89 | 57.0 | 7.12e-01 | 90.1% | 99.2% |
| 3959638 | 58.2.1.0 ↗ | beta barrels › Oncogene product-like › LigD phosphoesterase domain › LigD phosphoesterase domain | 0.79 | 57.0 | 6.36e-01 | 92.8% | 91.7% |
| 1692496 | 58.2.1.1 ↗ | beta barrels › Oncogene product-like › LigD phosphoesterase domain › LigD phosphoesterase domain › LigD_N | 0.76 | 57.0 | 5.95e-01 | 91.7% | 81.7% |
| 3981360 | 4.1.1.188 ↗ | beta barrels › SH3 › SH3 › SH3 › Imm26 | 0.64 | 35.0 | 3.88e-01 | 70.7% | 65.7% |
| 3995220 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 35.0 | 3.68e-01 | 77.9% | 65.0% |
D2
high
residues 28-100
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zgzA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.54 | 47.0 | 3.61e-01 | 100.0% | 41.8% |
| 3eo8A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.52 | 44.0 | 3.28e-01 | 100.0% | 85.4% |
| 2f37A00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.51 | 36.0 | 2.53e-01 | 75.3% | 22.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.58 | 50.0 | 3.03e-01 | 100.0% | 14.2% | |
| 5004943 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.56 | 46.0 | 3.72e-01 | 98.6% | 70.0% |
| 3231025 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.50 | 44.0 | 3.27e-01 | 100.0% | 48.7% |