←Back to structures
IMGVR_UViG_3300005099_000065-3300005099-Ga0072682_11979749
Arc-VirIMGVR_UViG_3300005099_000065-3300005099-Ga0072682_11979749
Identity
- Kingdom:
- archaea
Quality
76.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 14-73
Domain cluster:
rep: IMGVR_UViG_3300021495_000001-3300021495-Ga0190352_100000397__D94-146
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ixjA01 | 3.30.1300.80 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.71 | 48.0 | 4.38e-01 | 70.0% | 55.8% |
| 2c42A06 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.65 | 49.0 | 3.00e-01 | 81.7% | 17.1% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.59 | 40.0 | 3.68e-01 | 98.3% | 56.0% |
| 4rh7A01 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.57 | 48.0 | 2.96e-01 | 95.0% | 87.8% |
| 4rz7A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 48.0 | 3.80e-01 | 95.0% | 76.0% |
| 2l3wA01 | 1.10.3130.20 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › Phycobilisome linker domain | 0.54 | 45.0 | 3.61e-01 | 96.7% | 82.0% |
| 2wa0A01 | 1.10.10.1200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif | 0.53 | 43.0 | 3.70e-01 | 91.7% | 80.2% |
| 6w0pA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.53 | 39.0 | 2.37e-01 | 95.0% | 11.1% |
| 3pr6A00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 40.0 | 3.07e-01 | 85.0% | 68.3% |
| 3fixA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 44.0 | 3.24e-01 | 98.3% | 86.7% |
| 3juwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 41.0 | 3.00e-01 | 90.0% | 55.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963879 | 829.1.1.1 ↗ | a+b duplicates or obligate multimers › NinB › NinB › NinB › NinB | 0.66 | 47.0 | 4.22e-01 | 76.7% | 100.0% |
| 3990111 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.64 | 46.0 | 3.60e-01 | 76.7% | 51.5% |
| 4953940 | 2007.7.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Precorrin-8X methylmutase CbiC/CobH › Precorrin-8X methylmutase CbiC/CobH › CbiC | 0.60 | 50.0 | 3.49e-01 | 93.3% | 88.7% |
| None | — | 0.59 | 35.0 | 4.14e-01 | 76.7% | 90.0% | |
| 4822508 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.57 | 38.0 | 3.33e-01 | 78.3% | 49.4% |
| 3846043 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.55 | 41.0 | 2.61e-01 | 83.3% | 16.3% |
| 4000395 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.51 | 39.0 | 2.82e-01 | 90.0% | 40.0% |