Back to structures

IMGVR_UViG_3300005099_000065-3300005099-Ga0072682_11979764

Arc-Vir

IMGVR_UViG_3300005099_000065-3300005099-Ga0072682_11979764

Quality

60.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-81
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2etdA00 1.20.1440.20 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain 0.73 62.0 5.04e-01 94.7% 66.7%
2lqgA00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.64 54.0 4.55e-01 98.7% 92.0%
3qygB01 1.10.472.20 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Nitrile hydratase, beta subunit 0.63 44.0 3.76e-01 72.0% 66.1%
3ljcA02 1.20.58.1480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 48.0 4.05e-01 90.7% 51.6%
4djgB00 1.20.5.440 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain 0.60 37.0 4.56e-01 85.3% 100.0%
4gx0A01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 53.0 4.78e-01 98.7% 71.8%
4ioeA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.59 38.0 3.62e-01 89.3% 56.3%
2qqyA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.59 51.0 4.27e-01 100.0% 68.1%
8ctsB01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 48.0 4.65e-01 90.7% 81.6%
3l1nA02 1.20.1280.140 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.58 36.0 3.45e-01 93.3% 52.9%
2gv9A05 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.58 35.0 3.82e-01 93.3% 74.6%
2kiwA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.58 41.0 3.90e-01 86.7% 64.0%
4rflA02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.57 45.0 3.46e-01 90.7% 77.4%
6mcjA00 1.10.2090.10 Mainly Alpha › Orthogonal Bundle › orange carotenoid protein, domain 2 › Orange carotenoid-binding protein, N-terminal domain 0.56 39.0 3.21e-01 72.0% 73.1%
3k8kA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.56 39.0 2.53e-01 72.0% 42.3%
3ffvA00 3.40.1580.20 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › Syd protein 0.55 48.0 3.67e-01 98.7% 87.8%
3eslA01 1.20.58.2070 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 36.0 3.66e-01 72.0% 93.3%
8a1gC01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.53 38.0 2.88e-01 94.7% 31.5%
2lpbA00 1.10.287.2920 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 36.0 3.56e-01 77.3% 67.9%
2xzmP00 3.30.70.3370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 36.0 2.96e-01 100.0% 37.2%
3g2eB00 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.52 43.0 3.35e-01 96.0% 93.5%
2d9dA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.52 38.0 3.63e-01 100.0% 66.3%
3cxbA03 1.10.1740.30 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain 0.51 38.0 3.72e-01 86.7% 72.8%
3fbiD00 1.10.10.1340 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Mediator of RNA polymerase II, submodule Med31 (Soh1) 0.51 34.0 3.24e-01 70.7% 76.6%
3on3B00 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.50 38.0 3.10e-01 88.0% 90.9%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3177211 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.66 38.0 3.72e-01 89.3% 50.6%
4530474 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.65 51.0 4.98e-01 84.0% 82.5%
3621378 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.64 53.0 4.19e-01 94.7% 87.3%
3439564 603.1.1.1 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin 0.64 51.0 3.88e-01 93.3% 36.2%
3411996 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.62 56.0 4.48e-01 100.0% 57.2%
4967463 601.7.1.2 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN 0.61 45.0 3.87e-01 86.7% 48.0%
4936259 3930.1.1.3 alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical 0.61 51.0 4.33e-01 93.3% 62.4%
3414371 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.61 48.0 3.66e-01 89.3% 82.1%
4200387 192.7.1.3 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Phe_tRNA-synt_N 0.61 39.0 3.73e-01 94.7% 55.6%
3286911 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 37.0 3.88e-01 90.7% 65.7%
5063205 5051.1.1.9 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Transp_cyt_pur 0.60 52.0 3.34e-01 100.0% 37.3%
3261028 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.60 41.0 3.91e-01 85.3% 62.4%
4284928 314.1.1.0 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.59 38.0 2.42e-01 93.3% 14.0%
3393894 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.59 49.0 3.84e-01 94.7% 42.4%
390543 5051.1.1.9 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Transp_cyt_pur 0.59 49.0 3.01e-01 90.7% 30.8%
3541154 1078.1.1.6 extended segments › Bd-type quinol oxidase transmembrane helix subunit › Bd-type quinol oxidase transmembrane helix subunit › Bd-type quinol oxidase transmembrane helix subunit › TMEM238 0.57 36.0 4.15e-01 89.3% 87.3%
5004033 6155.1.1.1 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv 0.57 38.0 3.58e-01 94.7% 57.8%
5015625 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.57 48.0 2.98e-01 100.0% 28.4%
3498152 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.56 47.0 3.54e-01 94.7% 97.4%
4147679 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.54 46.0 3.30e-01 96.0% 60.4%
4606236 192.7.1.3 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Phe_tRNA-synt_N 0.54 34.0 3.25e-01 93.3% 53.3%
3839906 3201.1.1.1 alpha arrays › HP0721 › HP0721 › HP0721 › DUF1104 0.53 31.0 3.23e-01 81.3% 59.4%
4989921 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.53 43.0 3.42e-01 98.7% 87.6%
3725257 109.3.1.148 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Goodbye 0.52 43.0 3.10e-01 90.7% 64.9%
3735505 3924.1.1.0 alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 0.51 43.0 2.80e-01 100.0% 57.6%
4169813 185.1.1.5 alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Gliadin 0.51 37.0 3.25e-01 76.0% 70.9%
4418861 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 37.0 2.65e-01 80.0% 69.2%
4029043 101.11.1.0 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.51 40.0 3.79e-01 93.3% 71.1%
3577880 103.4.1.0 alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.50 32.0 3.19e-01 94.7% 57.6%
D2 high residues 153-213
PDB
Domain cluster: representative
CATH (72)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 73.0 6.84e-01 100.0% 79.5%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.83 76.0 5.04e-01 100.0% 27.5%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 69.0 5.88e-01 100.0% 57.9%
1lvaA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 70.0 7.06e-01 100.0% 93.3%
1cf7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 74.0 6.70e-01 100.0% 89.0%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 68.0 5.91e-01 100.0% 61.1%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 74.0 6.56e-01 98.4% 76.2%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 67.0 5.21e-01 100.0% 43.5%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 5.21e-01 100.0% 43.4%
4mtdD01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 72.0 6.31e-01 100.0% 70.5%
3o2pE00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 72.0 6.39e-01 100.0% 74.4%
2lsoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 72.0 6.45e-01 100.0% 85.5%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 71.0 6.21e-01 100.0% 71.4%
1yg2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 73.0 6.62e-01 100.0% 77.2%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 71.0 6.25e-01 100.0% 80.5%
2pexA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 4.87e-01 100.0% 39.7%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 69.0 6.30e-01 100.0% 78.0%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 71.0 6.00e-01 100.0% 67.3%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 69.0 6.14e-01 100.0% 71.3%
2xubA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 69.0 5.99e-01 100.0% 76.1%
2v7fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 70.0 5.28e-01 100.0% 46.8%
2g9wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 68.0 6.65e-01 100.0% 89.6%
4cgyA02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.77 70.0 4.83e-01 100.0% 34.7%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 5.42e-01 100.0% 60.7%
2zo4A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 56.0 6.16e-01 85.2% 98.0%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 5.00e-01 100.0% 41.4%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 68.0 5.66e-01 100.0% 66.7%
2pjpA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 6.45e-01 100.0% 93.4%
2ia2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 6.04e-01 100.0% 80.9%
3qyfA03 1.10.10.1690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Uncharacterised CRISPR-associated protein family, UPF0236 0.75 55.0 5.59e-01 100.0% 78.7%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 67.0 6.29e-01 100.0% 86.7%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 60.0 5.46e-01 100.0% 66.7%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 65.0 5.52e-01 100.0% 65.0%
6do0A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 64.0 5.48e-01 100.0% 64.0%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 5.34e-01 100.0% 65.9%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 65.0 5.47e-01 100.0% 70.3%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 4.83e-01 100.0% 45.0%
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.72 56.0 4.97e-01 88.5% 58.9%
4bgdA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 5.53e-01 100.0% 96.7%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 64.0 5.51e-01 100.0% 75.5%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 57.0 4.28e-01 100.0% 35.8%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 5.08e-01 100.0% 62.8%
2vlaA03 1.10.10.2090 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.71 62.0 5.04e-01 100.0% 81.7%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 63.0 5.78e-01 100.0% 84.6%
3b02A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 62.0 5.59e-01 100.0% 80.0%
1o3sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 62.0 5.95e-01 100.0% 98.6%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 61.0 5.51e-01 100.0% 82.1%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.75e-01 100.0% 89.2%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 61.0 5.76e-01 100.0% 83.6%
2nriB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 60.0 5.29e-01 100.0% 67.4%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 60.0 5.38e-01 100.0% 86.0%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 60.0 4.63e-01 100.0% 44.2%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 61.0 5.53e-01 100.0% 84.0%
3e97A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 60.0 5.57e-01 100.0% 87.2%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.68 50.0 4.40e-01 82.0% 54.6%
2fmyA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 60.0 5.44e-01 100.0% 85.4%
2h6bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 60.0 5.15e-01 100.0% 70.8%
2v9vA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 59.0 5.70e-01 100.0% 91.3%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 59.0 5.44e-01 100.0% 86.3%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 59.0 5.49e-01 100.0% 80.5%
3go5A04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 56.0 5.62e-01 100.0% 96.8%
3r2cA00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.64 47.0 3.77e-01 83.6% 38.4%
1gt0D00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.64 43.0 4.08e-01 72.1% 58.2%
2pmyA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.63 48.0 4.52e-01 90.2% 68.5%
6jrpA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.62 42.0 4.23e-01 70.5% 73.8%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 47.0 4.26e-01 100.0% 60.7%
3bbzA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.58 36.0 3.96e-01 80.3% 77.1%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 4.50e-01 100.0% 83.1%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.57 42.0 4.00e-01 80.3% 78.4%
4p32B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 48.0 3.33e-01 100.0% 29.6%
4ywoA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 42.0 3.04e-01 86.9% 45.3%
2bs2A02 3.90.700.10 Alpha Beta › Alpha-Beta Complex › Flavocytochrome C3; Chain A, domain 1 › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 0.55 40.0 3.35e-01 77.0% 63.6%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3398923 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.90 84.0 7.56e-01 100.0% 78.8%
3390907 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 80.0 7.07e-01 100.0% 76.2%
4629323 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.86 78.0 7.43e-01 98.4% 94.3%
3390278 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 79.0 7.73e-01 100.0% 98.5%
5073482 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 67.0 6.37e-01 96.7% 72.9%
4560206 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.85 79.0 6.81e-01 100.0% 78.9%
4220501 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.85 79.0 6.67e-01 100.0% 74.7%
4438125 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.85 78.0 6.49e-01 100.0% 71.0%
4232234 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.85 78.0 5.35e-01 100.0% 37.4%
4331694 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 73.0 7.39e-01 100.0% 95.0%
3413051 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.84 76.0 7.50e-01 100.0% 95.4%
5029028 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 72.0 5.66e-01 95.1% 47.5%
4969033 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 76.0 5.35e-01 100.0% 36.1%
3293296 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.83 76.0 7.24e-01 100.0% 92.9%
3809378 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.83 76.0 7.23e-01 100.0% 94.3%
3413561 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.83 75.0 6.23e-01 100.0% 61.0%
3984604 7558.1.1.10 a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › GPAT_C 0.83 76.0 6.45e-01 100.0% 74.7%
3404553 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 76.0 7.42e-01 100.0% 98.5%
4558680 101.1.2.807 alpha arrays › HTH › HTH › winged helix domain › MC6 0.83 76.0 6.87e-01 100.0% 76.2%
5045956 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 74.0 6.73e-01 100.0% 88.7%
3816436 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.82 75.0 5.98e-01 100.0% 59.1%
3653189 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.82 75.0 7.36e-01 100.0% 100.0%
3401123 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.82 72.0 6.75e-01 98.4% 81.3%
3381711 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.82 74.0 6.10e-01 100.0% 61.0%
5047007 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 73.0 6.29e-01 100.0% 74.7%
3372110 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.82 74.0 7.08e-01 100.0% 95.7%
3814573 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 73.0 6.09e-01 100.0% 64.8%
5077445 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 75.0 5.49e-01 100.0% 44.4%
3740394 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 75.0 5.89e-01 100.0% 52.1%
3643333 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.82 73.0 6.42e-01 100.0% 74.4%
3393979 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.82 73.0 5.97e-01 100.0% 57.3%
3905735 101.1.2.94 alpha arrays › HTH › HTH › winged helix domain › ANAPC2 0.82 74.0 6.58e-01 100.0% 80.0%
4210864 101.1.2.808 alpha arrays › HTH › HTH › winged helix domain › PF30520 0.81 71.0 7.15e-01 100.0% 96.7%
4026719 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 74.0 5.75e-01 100.0% 53.6%
3392763 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 74.0 6.58e-01 100.0% 82.4%
4369318 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 72.0 7.30e-01 98.4% 100.0%
3308083 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 72.0 5.98e-01 100.0% 61.9%
3462112 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.80 71.0 6.40e-01 100.0% 82.4%
4997427 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 69.0 6.03e-01 100.0% 64.4%
5028329 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 71.0 6.64e-01 100.0% 94.7%
5073913 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 70.0 6.85e-01 100.0% 90.8%
5031879 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 63.0 5.44e-01 100.0% 55.8%
5022256 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 72.0 6.23e-01 100.0% 76.7%
3618188 101.1.2.265 alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.79 71.0 5.78e-01 100.0% 60.0%
5047762 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 69.0 6.77e-01 98.4% 98.5%
4276676 101.1.2.280 alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.79 70.0 6.53e-01 100.0% 80.0%
5049455 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.78 70.0 5.33e-01 100.0% 44.3%
5029501 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 70.0 5.34e-01 100.0% 62.1%
3587524 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 70.0 5.92e-01 100.0% 69.0%
3583002 101.1.2.265 alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.78 70.0 6.74e-01 100.0% 95.7%
5002881 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 70.0 5.93e-01 100.0% 67.0%
3706397 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 68.0 6.74e-01 98.4% 92.3%
3997738 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 61.0 5.46e-01 100.0% 61.2%
3639822 101.1.2.94 alpha arrays › HTH › HTH › winged helix domain › ANAPC2 0.78 68.0 4.76e-01 100.0% 31.7%
4997786 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 69.0 6.20e-01 100.0% 75.3%
5035389 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 69.0 6.18e-01 100.0% 74.1%
3677001 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.77 68.0 5.90e-01 100.0% 67.4%
4808209 101.1.2.67 alpha arrays › HTH › HTH › winged helix domain › HARE-HTH 0.77 68.0 5.76e-01 100.0% 67.3%
4954654 101.1.2.99 alpha arrays › HTH › HTH › winged helix domain › BrxA 0.77 67.0 5.43e-01 100.0% 61.7%
3442533 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.77 68.0 5.46e-01 100.0% 57.5%
4948706 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 56.0 5.30e-01 85.2% 65.7%
3398316 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.77 67.0 6.08e-01 100.0% 74.1%
5011050 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.77 68.0 5.40e-01 100.0% 49.6%
3588087 101.1.2.99 alpha arrays › HTH › HTH › winged helix domain › BrxA 0.77 67.0 5.42e-01 100.0% 61.7%
4956598 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 61.0 6.35e-01 100.0% 96.4%
5047215 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 59.0 6.21e-01 83.6% 98.2%
3738687 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.76 68.0 5.20e-01 100.0% 60.0%
3933409 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 68.0 6.20e-01 100.0% 83.7%
5072968 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 59.0 5.86e-01 100.0% 80.0%
4927049 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 67.0 5.68e-01 100.0% 62.0%
3217621 101.1.2.265 alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.75 67.0 6.43e-01 100.0% 95.7%
4973627 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 66.0 5.26e-01 100.0% 54.4%
3167826 101.1.2.466 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C 0.75 67.0 6.25e-01 100.0% 89.3%
5071655 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 62.0 5.43e-01 100.0% 61.1%
4966822 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 61.0 5.03e-01 90.2% 54.5%
5049306 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 67.0 5.40e-01 100.0% 57.4%
3780237 101.1.2.265 alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.74 65.0 4.64e-01 100.0% 36.2%
3187170 101.1.2.160 alpha arrays › HTH › HTH › winged helix domain › BLACT_WH 0.74 58.0 5.32e-01 85.2% 95.0%
3407956 101.1.2.265 alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.74 65.0 4.61e-01 100.0% 35.3%
3631239 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.74 66.0 4.66e-01 100.0% 54.1%
3525815 101.1.2.265 alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.74 65.0 5.66e-01 100.0% 70.5%
5045022 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 66.0 5.26e-01 100.0% 50.8%
4991791 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 64.0 5.59e-01 100.0% 72.6%
5079431 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 64.0 5.04e-01 100.0% 61.5%
5072071 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 66.0 6.28e-01 100.0% 91.4%
4600309 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.73 63.0 5.42e-01 100.0% 73.0%
4932302 101.1.2.913 alpha arrays › HTH › HTH › winged helix domain › WH_Lhr 0.72 63.0 5.83e-01 100.0% 80.0%
5047361 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 56.0 5.87e-01 85.2% 98.2%
5082787 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.72 63.0 5.36e-01 100.0% 80.0%
5075915 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 63.0 5.67e-01 100.0% 75.3%
4991685 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 61.0 5.13e-01 100.0% 68.2%
1871577 101.1.2.129 alpha arrays › HTH › HTH › winged helix domain › BpuJI_N 0.71 62.0 4.64e-01 100.0% 64.7%
1721529 101.1.2.114 alpha arrays › HTH › HTH › winged helix domain › RE_AlwI 0.70 60.0 4.50e-01 100.0% 72.8%
5024114 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.70 61.0 4.68e-01 100.0% 42.9%
3944078 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 58.0 5.58e-01 100.0% 82.9%
3805792 101.1.2.137 alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.67 58.0 5.33e-01 100.0% 80.0%
5053142 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 56.0 4.61e-01 100.0% 52.5%
4361463 101.19.1.1 alpha arrays › HTH › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › HemN_C 0.62 53.0 4.58e-01 100.0% 77.0%
4933356 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.60 50.0 3.83e-01 100.0% 40.7%