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IMGVR_UViG_3300005099_000065-3300005099-Ga0072682_11979769
Arc-VirIMGVR_UViG_3300005099_000065-3300005099-Ga0072682_11979769
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-98
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rkiA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.69 | 59.0 | 5.37e-01 | 95.7% | 89.2% |
| 8dqwG01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.66 | 54.0 | 4.52e-01 | 92.6% | 73.1% |
| 1sxjH02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.65 | 56.0 | 5.09e-01 | 95.7% | 90.6% |
| 6ptrB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.65 | 57.0 | 5.43e-01 | 100.0% | 94.7% |
| 1plqA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.65 | 56.0 | 4.14e-01 | 97.9% | 45.7% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.65 | 56.0 | 4.17e-01 | 98.9% | 45.9% |
| 5wceA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.65 | 55.0 | 5.17e-01 | 96.8% | 92.4% |
| 1rwzA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.65 | 56.0 | 4.21e-01 | 98.9% | 47.5% |
| 1u7bA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.64 | 56.0 | 4.21e-01 | 100.0% | 47.8% |
| 2ix2B00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.64 | 56.0 | 4.24e-01 | 100.0% | 46.9% |
| 1vpkA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.64 | 55.0 | 5.15e-01 | 96.8% | 93.3% |
| 5aguA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.64 | 55.0 | 5.05e-01 | 96.8% | 92.9% |
| 5agvA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.64 | 57.0 | 5.11e-01 | 100.0% | 90.1% |
| 2qv8A00 | 3.55.40.10 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › minor pseudopilin epsh domain | 0.64 | 54.0 | 4.64e-01 | 90.4% | 87.5% |
| 6ap4B02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.64 | 55.0 | 4.93e-01 | 100.0% | 86.5% |
| 2avtA02 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.64 | 54.0 | 4.31e-01 | 95.7% | 56.8% |
| 1jqlA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.64 | 55.0 | 5.11e-01 | 96.8% | 92.4% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.64 | 56.0 | 5.32e-01 | 100.0% | 94.7% |
| 5agvA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.63 | 56.0 | 5.13e-01 | 100.0% | 87.9% |
| 1b77A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.63 | 56.0 | 4.27e-01 | 100.0% | 43.9% |
| 4trtA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.63 | 55.0 | 5.14e-01 | 100.0% | 89.3% |
| 3pweA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.63 | 54.0 | 5.04e-01 | 98.9% | 93.5% |
| 3t0pA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.63 | 53.0 | 4.30e-01 | 95.7% | 56.0% |
| 4trtA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.63 | 54.0 | 4.98e-01 | 95.7% | 91.7% |
| 4trtA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.63 | 55.0 | 5.15e-01 | 100.0% | 89.9% |
| 1vpkA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.62 | 54.0 | 4.93e-01 | 100.0% | 89.8% |
| 1vpkA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.62 | 55.0 | 5.09e-01 | 100.0% | 90.8% |
| 2knqA01 | 3.55.40.10 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › minor pseudopilin epsh domain | 0.61 | 51.0 | 4.53e-01 | 90.4% | 84.8% |
| 1whzA00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.61 | 30.0 | 3.48e-01 | 77.7% | 63.8% |
| 1ijqA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.60 | 45.0 | 3.33e-01 | 80.9% | 96.1% |
| 3ei3A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 49.0 | 3.38e-01 | 90.4% | 89.0% |
| 2ix2A01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.59 | 48.0 | 3.78e-01 | 92.6% | 48.0% |
| 3nvnA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 46.0 | 3.07e-01 | 90.4% | 92.2% |
| 8f5pC01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 41.0 | 2.94e-01 | 78.7% | 32.4% |
| 4ckbA01 | 3.30.470.140 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › | 0.55 | 41.0 | 3.35e-01 | 78.7% | 69.7% |
| 2zylA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.55 | 41.0 | 3.17e-01 | 79.8% | 84.3% |
| 3tc9A02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 43.0 | 3.05e-01 | 90.4% | 84.5% |
| 1s1dA00 | 2.120.10.100 | Mainly Beta › 6 Propeller › Neuraminidase › Apyrase | 0.53 | 42.0 | 2.95e-01 | 86.2% | 71.6% |
| 1k32A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 39.0 | 2.74e-01 | 80.9% | 66.0% |
| 4u3vA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.53 | 43.0 | 3.32e-01 | 93.6% | 93.4% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1871497 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.68 | 59.0 | 5.48e-01 | 96.8% | 89.9% |
| 4981896 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.67 | 48.0 | 4.25e-01 | 75.5% | 69.6% |
| 3388280 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.67 | 59.0 | 5.50e-01 | 100.0% | 89.2% |
| 143428 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.66 | 57.0 | 5.27e-01 | 95.7% | 90.0% |
| 3932751 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.66 | 55.0 | 5.03e-01 | 94.7% | 89.2% |
| 3782606 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.66 | 58.0 | 5.06e-01 | 100.0% | 89.0% |
| 5029787 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.65 | 57.0 | 5.32e-01 | 98.9% | 91.7% |
| 4456195 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.65 | 56.0 | 5.20e-01 | 96.8% | 95.0% |
| 144176 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.65 | 56.0 | 5.19e-01 | 98.9% | 94.4% |
| 3238130 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.65 | 56.0 | 4.96e-01 | 100.0% | 86.2% |
| 4998585 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.65 | 55.0 | 5.15e-01 | 96.8% | 92.5% |
| 4233359 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.65 | 52.0 | 4.55e-01 | 86.2% | 87.1% |
| 2588759 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.65 | 56.0 | 5.14e-01 | 95.7% | 92.6% |
| 2878142 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.64 | 56.0 | 5.14e-01 | 97.9% | 91.1% |
| 3558235 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.64 | 55.0 | 4.86e-01 | 93.6% | 90.4% |
| 4026069 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.64 | 54.0 | 4.86e-01 | 94.7% | 86.7% |
| 4976500 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.64 | 56.0 | 5.11e-01 | 98.9% | 89.1% |
| 4876748 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.64 | 57.0 | 5.22e-01 | 100.0% | 87.9% |
| 2392242 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.64 | 57.0 | 5.40e-01 | 100.0% | 89.4% |
| 3967126 | 274.1.1.13 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › GspH | 0.64 | 54.0 | 4.63e-01 | 90.4% | 82.1% |
| 1290662 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.64 | 56.0 | 4.94e-01 | 98.9% | 81.8% |
| 2878147 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.64 | 54.0 | 4.82e-01 | 95.7% | 83.9% |
| 3251867 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.64 | 56.0 | 5.06e-01 | 97.9% | 91.5% |
| 4517015 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.64 | 57.0 | 5.19e-01 | 98.9% | 91.1% |
| 5037345 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.64 | 56.0 | 5.03e-01 | 98.9% | 89.5% |
| 4050655 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.64 | 55.0 | 4.99e-01 | 98.9% | 88.5% |
| 309454 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.63 | 56.0 | 5.02e-01 | 98.9% | 87.1% |
| 4860663 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.63 | 55.0 | 4.89e-01 | 98.9% | 78.6% |
| 3292092 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.63 | 56.0 | 5.03e-01 | 100.0% | 91.8% |
| 5037314 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.63 | 53.0 | 4.97e-01 | 93.6% | 93.3% |
| 3715457 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.63 | 55.0 | 4.79e-01 | 100.0% | 92.8% |
| 3507499 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.63 | 54.0 | 4.82e-01 | 94.7% | 94.1% |
| 4460660 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.63 | 56.0 | 5.00e-01 | 100.0% | 87.4% |
| 4069893 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.63 | 56.0 | 5.12e-01 | 100.0% | 88.8% |
| 5991 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.63 | 54.0 | 5.00e-01 | 97.9% | 92.6% |
| 3251045 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.63 | 55.0 | 4.75e-01 | 98.9% | 75.3% |
| 4941929 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.63 | 54.0 | 4.96e-01 | 98.9% | 91.4% |
| 4241499 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.63 | 53.0 | 5.17e-01 | 90.4% | 84.5% |
| 4372908 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.63 | 54.0 | 4.92e-01 | 95.7% | 87.2% |
| 4956740 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.63 | 55.0 | 5.06e-01 | 98.9% | 92.0% |
| 167574 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.62 | 55.0 | 4.94e-01 | 98.9% | 87.0% |
| 4952337 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.62 | 45.0 | 4.48e-01 | 76.6% | 80.0% |
| 1549270 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.62 | 55.0 | 5.12e-01 | 100.0% | 91.5% |
| 5977 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.62 | 55.0 | 5.09e-01 | 100.0% | 90.8% |
| 5039027 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.62 | 55.0 | 5.10e-01 | 100.0% | 93.3% |
| 4660283 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.62 | 54.0 | 4.97e-01 | 98.9% | 93.6% |
| 4146527 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.62 | 54.0 | 4.91e-01 | 100.0% | 88.5% |
| 2878151 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.62 | 53.0 | 4.99e-01 | 100.0% | 94.2% |
| 3719897 | 227.1.1.18 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_C | 0.61 | 50.0 | 4.64e-01 | 91.5% | 88.0% |
| 5028240 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.61 | 45.0 | 4.01e-01 | 76.6% | 66.2% |
| 3844453 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.61 | 48.0 | 3.46e-01 | 84.0% | 93.0% |
| 3174725 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.60 | 50.0 | 3.30e-01 | 90.4% | 96.1% |
| 3866163 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.59 | 45.0 | 3.28e-01 | 83.0% | 93.7% |
| 3484813 | 319.1.1.5 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PIH1_CS | 0.57 | 39.0 | 4.09e-01 | 70.2% | 91.8% |
| 3531756 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.56 | 44.0 | 3.28e-01 | 87.2% | 95.8% |
| 4017263 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.56 | 38.0 | 3.81e-01 | 70.2% | 91.6% |
| 3922237 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 44.0 | 3.16e-01 | 85.1% | 78.9% |
| 4240702 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.55 | 42.0 | 2.73e-01 | 81.9% | 75.1% |
| 3532954 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.55 | 45.0 | 3.57e-01 | 100.0% | 42.5% |
| 3448558 | 880.1.1.1 ↗ | a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind | 0.53 | 41.0 | 2.59e-01 | 84.0% | 83.4% |
| 3989004 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.52 | 45.0 | 3.12e-01 | 95.7% | 32.9% |
| None | — | 0.51 | 44.0 | 3.07e-01 | 96.8% | 42.7% | |
| 4383522 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.51 | 44.0 | 2.95e-01 | 100.0% | 25.8% |
D2
high
residues 117-225
Domain cluster:
rep: SRR1747052_scaffold_2_prodigal-single.1__X__X__00025__D169-297
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sxjH02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.83 | 78.0 | 7.35e-01 | 100.0% | 93.0% |
| 1plqA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.83 | 78.0 | 5.74e-01 | 100.0% | 46.1% |
| 1u7bA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.82 | 77.0 | 5.74e-01 | 100.0% | 46.2% |
| 1ge8A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.81 | 76.0 | 5.75e-01 | 100.0% | 48.3% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.81 | 75.0 | 5.60e-01 | 100.0% | 47.5% |
| 6j8yA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.81 | 75.0 | 5.58e-01 | 100.0% | 46.3% |
| 2ix2B00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.81 | 76.0 | 5.68e-01 | 100.0% | 46.5% |
| 1sxjH01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.80 | 74.0 | 7.04e-01 | 98.2% | 92.7% |
| 3ifvC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.80 | 74.0 | 5.63e-01 | 100.0% | 47.9% |
| 3p91A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.79 | 73.0 | 5.56e-01 | 100.0% | 46.9% |
| 1t6lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.79 | 74.0 | 5.50e-01 | 100.0% | 46.2% |
| 3hslX00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.79 | 74.0 | 5.28e-01 | 100.0% | 47.7% |
| 2avtA02 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.78 | 72.0 | 5.83e-01 | 100.0% | 57.3% |
| 1ud9A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.77 | 71.0 | 5.43e-01 | 100.0% | 47.1% |
| 2z0lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.77 | 71.0 | 5.11e-01 | 100.0% | 45.3% |
| 1rwzA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.77 | 71.0 | 5.38e-01 | 100.0% | 44.7% |
| 2ix2A01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.77 | 70.0 | 5.45e-01 | 98.2% | 49.3% |
| 4tr6A01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.76 | 71.0 | 5.91e-01 | 100.0% | 65.0% |
| 1vpkA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.75 | 70.0 | 6.81e-01 | 100.0% | 90.8% |
| 3t0pA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.74 | 69.0 | 5.84e-01 | 100.0% | 63.4% |
| 2avtB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.74 | 68.0 | 5.77e-01 | 99.1% | 64.0% |
| 3pweA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.74 | 68.0 | 6.54e-01 | 99.1% | 88.6% |
| 4rkiA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.74 | 67.0 | 6.34e-01 | 100.0% | 90.0% |
| 6ptrB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.74 | 68.0 | 6.71e-01 | 98.2% | 94.7% |
| 4trtA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.74 | 68.0 | 6.53e-01 | 100.0% | 88.5% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.73 | 67.0 | 6.67e-01 | 98.2% | 94.7% |
| 5agvA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.73 | 67.0 | 6.41e-01 | 100.0% | 87.1% |
| 5wceA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.72 | 66.0 | 6.26e-01 | 100.0% | 89.9% |
| 1ynjJ02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.59 | 33.0 | 4.17e-01 | 70.6% | 96.8% |
| 2q22A00 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.57 | 31.0 | 2.94e-01 | 91.7% | 42.3% |
| 2r41A00 | 3.10.450.150 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein | 0.56 | 42.0 | 4.30e-01 | 100.0% | 83.5% |
| 2fnqA01 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.52 | 29.0 | 2.95e-01 | 83.5% | 51.3% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 31.0 | 3.65e-01 | 91.7% | 96.9% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3478160 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.84 | 79.0 | 7.45e-01 | 100.0% | 93.8% |
| 3292092 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.84 | 78.0 | 7.24e-01 | 100.0% | 91.8% |
| 3412152 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.83 | 78.0 | 7.18e-01 | 100.0% | 90.4% |
| 138072 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.83 | 78.0 | 7.25e-01 | 100.0% | 90.8% |
| 1290662 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.83 | 77.0 | 6.97e-01 | 100.0% | 83.9% |
| 4030418 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.83 | 77.0 | 7.04e-01 | 100.0% | 92.1% |
| 3256903 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.83 | 77.0 | 7.14e-01 | 100.0% | 90.4% |
| 5028024 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.82 | 77.0 | 7.19e-01 | 100.0% | 88.5% |
| 3407530 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.82 | 77.0 | 7.07e-01 | 100.0% | 90.4% |
| 4948360 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.82 | 76.0 | 7.12e-01 | 98.2% | 86.8% |
| 4517015 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.82 | 77.0 | 7.31e-01 | 100.0% | 92.7% |
| 2392831 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.82 | 77.0 | 7.24e-01 | 100.0% | 91.3% |
| 4941929 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.82 | 76.0 | 7.20e-01 | 100.0% | 89.8% |
| 4976500 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.82 | 76.0 | 7.20e-01 | 100.0% | 89.8% |
| 1822927 | 227.1.1.2 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.81 | 75.0 | 6.49e-01 | 99.1% | 71.8% |
| 5037314 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.81 | 76.0 | 7.38e-01 | 100.0% | 95.8% |
| 3782606 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.81 | 76.0 | 6.81e-01 | 100.0% | 86.9% |
| 3223650 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.81 | 75.0 | 6.78e-01 | 100.0% | 89.7% |
| 3230925 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.81 | 76.0 | 7.08e-01 | 100.0% | 91.5% |
| 3997015 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.81 | 75.0 | 7.07e-01 | 100.0% | 91.5% |
| 5043507 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.81 | 76.0 | 7.31e-01 | 100.0% | 97.5% |
| 3623607 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.81 | 75.0 | 6.85e-01 | 100.0% | 90.7% |
| 3798354 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.81 | 75.0 | 6.94e-01 | 100.0% | 94.1% |
| 3810053 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.81 | 75.0 | 6.60e-01 | 100.0% | 90.3% |
| 3256386 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.81 | 75.0 | 6.93e-01 | 100.0% | 91.1% |
| 162047 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.81 | 75.0 | 7.09e-01 | 100.0% | 89.8% |
| 3932751 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.81 | 75.0 | 7.04e-01 | 100.0% | 92.3% |
| 4026073 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.81 | 74.0 | 7.08e-01 | 99.1% | 97.6% |
| 5000468 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.80 | 75.0 | 7.13e-01 | 100.0% | 95.2% |
| 4956740 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.80 | 75.0 | 7.14e-01 | 100.0% | 93.6% |
| 4870150 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.80 | 75.0 | 6.92e-01 | 100.0% | 87.3% |
| 3503503 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.80 | 74.0 | 6.64e-01 | 99.1% | 93.1% |
| 3624708 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.80 | 74.0 | 6.83e-01 | 100.0% | 88.1% |
| 3351110 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.80 | 74.0 | 7.14e-01 | 100.0% | 99.2% |
| 4542774 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.80 | 74.0 | 7.19e-01 | 100.0% | 94.2% |
| 309454 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.80 | 74.0 | 6.91e-01 | 100.0% | 87.1% |
| 143269 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.79 | 72.0 | 6.91e-01 | 98.2% | 89.6% |
| 4142781 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.79 | 73.0 | 7.00e-01 | 100.0% | 91.2% |
| 4998584 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.79 | 73.0 | 6.79e-01 | 100.0% | 90.4% |
| 3238130 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.79 | 74.0 | 6.63e-01 | 100.0% | 86.2% |
| 4995027 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.79 | 74.0 | 7.03e-01 | 100.0% | 88.0% |
| 4172290 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.79 | 73.0 | 6.83e-01 | 99.1% | 90.0% |
| 2325189 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.79 | 73.0 | 6.73e-01 | 100.0% | 88.3% |
| 5037344 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.79 | 72.0 | 7.00e-01 | 99.1% | 94.2% |
| 4987602 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.79 | 72.0 | 6.85e-01 | 98.2% | 90.4% |
| 2392830 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.79 | 73.0 | 6.84e-01 | 100.0% | 87.8% |
| 4178829 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.79 | 73.0 | 6.97e-01 | 100.0% | 89.6% |
| 5047575 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.79 | 73.0 | 6.94e-01 | 100.0% | 91.2% |
| 3251867 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.78 | 73.0 | 6.89e-01 | 100.0% | 91.5% |
| 3244229 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.78 | 73.0 | 6.99e-01 | 100.0% | 94.4% |
| 5023031 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.78 | 72.0 | 6.91e-01 | 100.0% | 92.8% |
| 4096140 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.78 | 72.0 | 6.85e-01 | 99.1% | 91.2% |
| 3406312 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.78 | 73.0 | 6.95e-01 | 100.0% | 95.1% |
| 2476832 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.77 | 72.0 | 6.64e-01 | 100.0% | 87.4% |
| 3719304 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.77 | 72.0 | 6.65e-01 | 100.0% | 87.3% |
| 4939065 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.77 | 71.0 | 6.87e-01 | 99.1% | 90.8% |
| 4599875 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.77 | 71.0 | 6.88e-01 | 99.1% | 90.0% |
| 3602548 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.77 | 71.0 | 6.80e-01 | 100.0% | 90.4% |
| 5000467 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.77 | 71.0 | 6.59e-01 | 100.0% | 94.1% |
| 4043935 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.77 | 70.0 | 6.64e-01 | 100.0% | 93.1% |
| 5990 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.77 | 71.0 | 6.84e-01 | 100.0% | 89.3% |
| 158230 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.76 | 71.0 | 6.70e-01 | 100.0% | 91.3% |
| 4059128 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.76 | 70.0 | 6.79e-01 | 99.1% | 90.8% |
| 5044014 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.76 | 70.0 | 6.90e-01 | 100.0% | 97.4% |
| 5074320 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.75 | 69.0 | 6.49e-01 | 100.0% | 92.3% |
| 4024730 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.75 | 52.0 | 5.81e-01 | 71.6% | 100.0% |
| 3719897 | 227.1.1.18 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_C | 0.70 | 64.0 | 6.09e-01 | 99.1% | 91.2% |
| 327025 | 6048.1.1.1 ↗ | a+b two layers › DUF960-like › DUF960-like › DUF960-like › DUF960 | 0.56 | 42.0 | 4.25e-01 | 85.3% | 80.2% |
| 3673032 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 31.0 | 3.71e-01 | 72.5% | 90.0% |
| 4952388 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.52 | 37.0 | 3.76e-01 | 95.4% | 74.5% |