←Back to structures
IMGVR_UViG_3300005099_000065-3300005099-Ga0072682_1197979
Arc-VirIMGVR_UViG_3300005099_000065-3300005099-Ga0072682_1197979
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 154-230
Domain cluster:
rep: IMGVR_UViG_3300045988_179044-3300045988-Ga0495776_047128_42343_42996__D138-216
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b34A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.72 | 51.0 | 3.87e-01 | 100.0% | 31.7% |
| 5i0dA05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.69 | 62.0 | 5.02e-01 | 97.4% | 97.8% |
| 6ea2A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.69 | 54.0 | 3.99e-01 | 100.0% | 34.2% |
| 5zi7A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.68 | 53.0 | 3.98e-01 | 100.0% | 34.6% |
| 4ba0A04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.64 | 56.0 | 4.53e-01 | 97.4% | 99.3% |
| 3vgfA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 43.0 | 4.19e-01 | 92.2% | 68.2% |
| 2bhuA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 43.0 | 4.06e-01 | 94.8% | 62.5% |
| 4aeeA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 46.0 | 4.27e-01 | 98.7% | 68.0% |
| 2yocA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 43.0 | 3.92e-01 | 94.8% | 59.3% |
| 2covG00 | 2.60.40.2450 | Mainly Beta › Sandwich › Immunoglobulin-like › Beta-1,3-xylanase, CBM31 domain | 0.57 | 42.0 | 4.09e-01 | 97.4% | 70.5% |
| 5nn3A05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 49.0 | 4.09e-01 | 94.8% | 100.0% |
| 2e8yA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 3.98e-01 | 94.8% | 65.3% |
| 2vr5B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 3.60e-01 | 94.8% | 45.0% |
| 3c0fB00 | 3.30.1490.340 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.56 | 38.0 | 3.74e-01 | 71.4% | 97.6% |
| 4ay0B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 4.20e-01 | 100.0% | 79.3% |
| 3amlA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 44.0 | 3.90e-01 | 94.8% | 59.1% |
| 4j3vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 3.80e-01 | 94.8% | 61.0% |
| 8dwoK02 | 2.60.40.4310 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain B | 0.55 | 37.0 | 3.97e-01 | 100.0% | 87.5% |
| 4bzyA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 3.91e-01 | 94.8% | 61.1% |
| 1tdqA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 4.25e-01 | 98.7% | 77.8% |
| 4q9bA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 47.0 | 4.34e-01 | 98.7% | 80.2% |
| 6rpxA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 4.05e-01 | 100.0% | 78.8% |
| 3utoA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 41.0 | 3.50e-01 | 84.4% | 55.1% |
| 2bc4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 46.0 | 4.14e-01 | 98.7% | 69.7% |
| 8ediA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 46.0 | 4.24e-01 | 100.0% | 76.0% |
| 1nrkA01 | 3.30.70.1630 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 44.0 | 4.14e-01 | 100.0% | 78.4% |
| 2wanA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.71e-01 | 93.5% | 63.7% |
| 2ya0A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 43.0 | 3.74e-01 | 97.4% | 57.0% |
| 2e6qA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 45.0 | 4.04e-01 | 100.0% | 69.6% |
| 3itqA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.52 | 40.0 | 3.14e-01 | 87.0% | 83.2% |
| 1bf2A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 3.43e-01 | 94.8% | 45.1% |
| 5ktiA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.50 | 39.0 | 3.23e-01 | 84.4% | 98.6% |
| 2ox8A00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.50 | 37.0 | 3.18e-01 | 79.2% | 98.4% |
| 5jipA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 40.0 | 3.86e-01 | 100.0% | 75.6% |
| 5jq1A00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.50 | 37.0 | 3.17e-01 | 79.2% | 97.7% |
| 3hupA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.50 | 39.0 | 3.35e-01 | 83.1% | 94.2% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2606543 | 11.42.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › beta-xylosidase (XylC) insertion domain › beta-xylosidase (XylC) insertion domain › GH141_M | 0.83 | 77.0 | 5.67e-01 | 100.0% | 98.4% |
| 3266832 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 54.0 | 5.36e-01 | 100.0% | 76.2% |
| 1031170 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.69 | 62.0 | 5.02e-01 | 97.4% | 97.1% |
| 3973010 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.68 | 52.0 | 3.89e-01 | 100.0% | 33.2% |
| 5019196 | 12.1.1.120 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › PF27849 | 0.68 | 62.0 | 5.36e-01 | 100.0% | 73.9% |
| 2392511 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.68 | 53.0 | 3.89e-01 | 100.0% | 32.8% |
| 5067672 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.66 | 50.0 | 4.94e-01 | 100.0% | 76.2% |
| 3289956 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.65 | 49.0 | 3.60e-01 | 100.0% | 31.3% |
| 3899153 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.65 | 57.0 | 5.30e-01 | 97.4% | 78.9% |
| 4124563 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.62 | 46.0 | 4.32e-01 | 94.8% | 64.2% |
| 4996262 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.62 | 52.0 | 4.82e-01 | 100.0% | 87.6% |
| 4272556 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.62 | 47.0 | 4.39e-01 | 97.4% | 66.3% |
| 4590318 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.61 | 46.0 | 4.35e-01 | 97.4% | 66.3% |
| 1406 | 11.1.1.47 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_48 | 0.61 | 43.0 | 4.14e-01 | 94.8% | 64.4% |
| 4069797 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.60 | 45.0 | 4.16e-01 | 94.8% | 62.0% |
| 3994374 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.60 | 41.0 | 4.24e-01 | 81.8% | 73.3% |
| 4456818 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.59 | 43.0 | 4.11e-01 | 97.4% | 64.2% |
| 2095620 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.59 | 49.0 | 4.10e-01 | 100.0% | 52.6% |
| 4248746 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.59 | 45.0 | 4.18e-01 | 97.4% | 64.0% |
| 4424497 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.59 | 43.0 | 4.07e-01 | 94.8% | 64.2% |
| 3917787 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.59 | 47.0 | 4.59e-01 | 100.0% | 80.0% |
| 4088040 | 11.1.1.47 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_48 | 0.59 | 44.0 | 3.87e-01 | 94.8% | 53.9% |
| 4305565 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.58 | 43.0 | 4.05e-01 | 94.8% | 64.2% |
| 3274608 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 43.0 | 4.46e-01 | 98.7% | 88.6% |
| 4122119 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.58 | 44.0 | 4.11e-01 | 94.8% | 65.3% |
| 3738652 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.58 | 51.0 | 4.22e-01 | 96.1% | 97.8% |
| 4073495 | 11.1.1.47 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_48 | 0.58 | 46.0 | 4.04e-01 | 97.4% | 58.3% |
| 3305050 | 11.1.1.47 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_48 | 0.57 | 44.0 | 3.87e-01 | 94.8% | 55.7% |
| 3836780 | 11.1.1.47 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_48 | 0.57 | 46.0 | 3.87e-01 | 93.5% | 51.1% |
| 4033129 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 46.0 | 4.06e-01 | 100.0% | 60.0% |
| 4493756 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.57 | 41.0 | 3.88e-01 | 94.8% | 63.2% |
| 3807714 | 2002.1.1.219 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Raffinose_syn | 0.56 | 51.0 | 4.74e-01 | 98.7% | 94.7% |
| 4408389 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.56 | 41.0 | 3.87e-01 | 94.8% | 62.0% |
| 2167652 | 11.1.1.47 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_48 | 0.56 | 42.0 | 3.53e-01 | 93.5% | 46.0% |
| 4417822 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.56 | 42.0 | 4.02e-01 | 97.4% | 68.4% |
| 1792326 | 11.1.1.19 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_E2_glycop | 0.54 | 38.0 | 3.24e-01 | 100.0% | 43.2% |
| 5069036 | 11.1.1.124 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glucodextran_B | 0.54 | 39.0 | 3.87e-01 | 100.0% | 73.8% |
| 1414 | 11.1.1.47 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_48 | 0.54 | 41.0 | 3.66e-01 | 94.8% | 56.5% |
| None | — | 0.53 | 38.0 | 2.67e-01 | 79.2% | 56.3% | |
| 4992084 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 40.0 | 3.74e-01 | 93.5% | 86.7% |
D2
high
residues 636-707
Domain cluster:
rep: OR387546.1__WOZ56478.1__GHCGIGKI_00120__00024__D924-1000
D3
medium
residues 233-266_298-317_335-376
Domain cluster:
representative
D4
medium
residues 404-447_467-485
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nk6A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.83 | 77.0 | 4.56e-01 | 98.4% | 20.8% |
| 3vmvA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.80 | 73.0 | 4.53e-01 | 98.4% | 31.2% |
| 7o7aA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.77 | 70.0 | 4.22e-01 | 100.0% | 19.5% |
| 5jlvC00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.63 | 55.0 | 4.72e-01 | 95.2% | 76.3% |
| 2wfhA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.56 | 45.0 | 3.41e-01 | 95.2% | 35.9% |
| 4ezgA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.55 | 45.0 | 3.33e-01 | 96.8% | 33.5% |
| 1oznA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.55 | 44.0 | 3.03e-01 | 98.4% | 23.2% |
| 4hq1A02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.54 | 43.0 | 3.65e-01 | 98.4% | 68.3% |
| 2orwB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 3.45e-01 | 92.1% | 66.9% |
| 3a06B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 41.0 | 3.29e-01 | 90.5% | 83.7% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5072865 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.84 | 77.0 | 4.95e-01 | 96.8% | 35.9% |
| 4980561 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.84 | 75.0 | 4.54e-01 | 96.8% | 25.1% |
| 3974440 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.84 | 78.0 | 4.58e-01 | 98.4% | 15.5% |
| 1140481 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.83 | 77.0 | 4.56e-01 | 98.4% | 20.8% |
| 4969618 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.82 | 75.0 | 4.95e-01 | 96.8% | 36.9% |
| 4944456 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.81 | 74.0 | 4.96e-01 | 98.4% | 49.3% |
| 4981294 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.80 | 70.0 | 4.91e-01 | 93.7% | 34.3% |
| 4321883 | 207.2.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 | 0.80 | 72.0 | 4.93e-01 | 98.4% | 54.0% |
| 5068647 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.79 | 71.0 | 4.59e-01 | 98.4% | 23.5% |
| 3716497 | 207.2.1.70 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Beta_helix | 0.76 | 69.0 | 4.00e-01 | 100.0% | 35.9% |
| 3264215 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.75 | 68.0 | 3.93e-01 | 100.0% | 17.2% |
| 4678601 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.75 | 67.0 | 4.06e-01 | 96.8% | 30.6% |
| 3164978 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.75 | 69.0 | 4.25e-01 | 100.0% | 27.6% |
| 5069437 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.74 | 66.0 | 4.25e-01 | 98.4% | 34.9% |
| 3277453 | 207.2.1.73 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › PF29740 | 0.73 | 66.0 | 4.45e-01 | 100.0% | 28.4% |
| 3335252 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.73 | 65.0 | 4.54e-01 | 98.4% | 46.2% |
| 3248661 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.67 | 61.0 | 4.13e-01 | 98.4% | 35.8% |
| 3715374 | 207.14.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › DGF-1_beta-sheet | 0.67 | 58.0 | 4.95e-01 | 98.4% | 61.0% |
| 4856486 | 207.9.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › LD_SV2 | 0.64 | 57.0 | 4.71e-01 | 98.4% | 69.4% |
| None | — | 0.62 | 54.0 | 4.62e-01 | 96.8% | 74.0% | |
| 3658107 | 207.1.1.103 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 | 0.60 | 51.0 | 3.46e-01 | 98.4% | 26.3% |
| 3684090 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 44.0 | 4.20e-01 | 93.7% | 68.0% |
| 3544111 | 207.1.1.63 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6,LRR_8 | 0.58 | 47.0 | 3.26e-01 | 92.1% | 25.8% |
| 3459646 | 207.4.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C | 0.58 | 47.0 | 3.52e-01 | 93.7% | 43.2% |
| 3492291 | 207.4.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C | 0.57 | 47.0 | 3.54e-01 | 93.7% | 44.8% |
| 3225471 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.54 | 39.0 | 3.37e-01 | 88.9% | 46.7% |
| 3766079 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.53 | 42.0 | 3.05e-01 | 95.2% | 28.6% |
D5
medium
residues 448-466_486-634
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8tmsA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.55 | 39.0 | 3.31e-01 | 72.6% | 75.0% |