←Back to structures
IMGVR_UViG_3300005099_000205-3300005099-Ga0072682_10918722
Arc-VirIMGVR_UViG_3300005099_000205-3300005099-Ga0072682_10918722
Identity
- Kingdom:
- archaea
Quality
84.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-111
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06262.18 best | Zincin_1 | 24.1 | 4.00e-05 | 46.4% | 34.7% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.68 | 37.0 | 4.25e-01 | 100.0% | 73.7% |
| 6se8A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 39.0 | 3.93e-01 | 100.0% | 58.3% |
| 2bolA03 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 40.0 | 4.31e-01 | 96.4% | 75.3% |
| 3hxlA05 | 3.30.360.90 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.63 | 39.0 | 4.72e-01 | 79.1% | 100.0% |
| 8dqwG01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.60 | 35.0 | 3.01e-01 | 77.3% | 36.0% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.60 | 32.0 | 3.29e-01 | 99.1% | 53.3% |
| 3eb7A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 36.0 | 3.16e-01 | 100.0% | 40.2% |
| 3bcyA00 | 3.40.1000.40 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 | 0.58 | 51.0 | 4.66e-01 | 97.3% | 84.2% |
| 3h5xA03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.56 | 42.0 | 4.20e-01 | 89.1% | 74.1% |
| 2wshA00 | 3.40.1440.40 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › | 0.56 | 35.0 | 3.29e-01 | 100.0% | 50.7% |
| 2zovA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.55 | 39.0 | 3.36e-01 | 71.8% | 48.8% |
| 2qm1B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 40.0 | 3.60e-01 | 81.8% | 90.8% |
| 1mg7A01 | 3.30.70.1000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Switch protein XOL-1, GHMP-like | 0.51 | 36.0 | 3.08e-01 | 71.8% | 85.7% |
| 1v0fA02 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.50 | 43.0 | 3.08e-01 | 98.2% | 100.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4028149 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.66 | 41.0 | 4.39e-01 | 90.0% | 71.6% |
| 4989448 | 223.1.1.20 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › DUF3365 | 0.60 | 43.0 | 4.04e-01 | 74.5% | 99.3% |
| 3822349 | 331.3.1.43 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C | 0.60 | 50.0 | 3.97e-01 | 92.7% | 74.5% |
| 4560979 | 331.3.1.19 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C | 0.57 | 48.0 | 3.79e-01 | 92.7% | 58.7% |
| 3622477 | 223.2.1.6 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN | 0.54 | 39.0 | 3.08e-01 | 75.5% | 80.8% |
| 3760983 | 3335.1.1.3 ↗ | beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › KCTD18_C | 0.54 | 45.0 | 4.76e-01 | 97.3% | 100.0% |
| 3970312 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.53 | 47.0 | 4.05e-01 | 100.0% | 94.4% |
| 3685242 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.53 | 36.0 | 3.06e-01 | 98.2% | 42.2% |
| 3850124 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.52 | 37.0 | 3.10e-01 | 74.5% | 83.9% |
| 4962730 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.51 | 43.0 | 3.82e-01 | 95.5% | 64.5% |
| 5065450 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 40.0 | 3.50e-01 | 98.2% | 58.1% |
| 3185077 | 331.3.1.46 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF7053 | 0.51 | 42.0 | 3.56e-01 | 90.9% | 67.0% |
| 4926836 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 39.0 | 3.69e-01 | 99.1% | 70.4% |